RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 ANP32CO43423 234 aa25.43■■□□□ 1.66
SLC38A10-203ENST00000539643 HSPA5P11021 654 aaKnown RBP25.41■■□□□ 1.66
SLC38A10-203ENST00000539643 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
SLC38A10-203ENST00000539643 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
SLC38A10-203ENST00000539643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.4■■□□□ 1.663e-6■■■■□ 20.1
SLC38A10-203ENST00000539643 POGZQ7Z3K3 1410 aa25.39■■□□□ 1.65
SLC38A10-203ENST00000539643 CCER2I3L3R5 266 aa25.38■■□□□ 1.65
SLC38A10-203ENST00000539643 EIF4G2P78344 907 aaKnown RBP eCLIP25.38■■□□□ 1.65
SLC38A10-203ENST00000539643 FAM69CQ0P6D2 419 aa25.38■■□□□ 1.65
SLC38A10-203ENST00000539643 DIP2BQ9P265 1576 aa25.37■■□□□ 1.65
SLC38A10-203ENST00000539643 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
SLC38A10-203ENST00000539643 ATP10AO60312 1499 aa25.36■■□□□ 1.65
SLC38A10-203ENST00000539643 KDM5CP41229 1560 aa25.36■■□□□ 1.65
SLC38A10-203ENST00000539643 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
SLC38A10-203ENST00000539643 PLA2R1Q13018 1463 aa25.35■■□□□ 1.65
SLC38A10-203ENST00000539643 DHX29Q7Z478 1369 aaKnown RBP25.35■■□□□ 1.65
SLC38A10-203ENST00000539643 UHRF1BP1Q6BDS2 1440 aa25.34■■□□□ 1.65
SLC38A10-203ENST00000539643 MLH3Q9UHC1 1453 aa25.33■■□□□ 1.65
SLC38A10-203ENST00000539643 EIF2AK4Q9P2K8 1649 aaKnown RBP25.32■■□□□ 1.64
SLC38A10-203ENST00000539643 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
SLC38A10-203ENST00000539643 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
SLC38A10-203ENST00000539643 CCDC144AA2RUR9 1427 aa25.31■■□□□ 1.64
SLC38A10-203ENST00000539643 RAPGEF3O95398 923 aa25.29■■□□□ 1.64
SLC38A10-203ENST00000539643 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
SLC38A10-203ENST00000539643 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
SLC38A10-203ENST00000539643 HECW2Q9P2P5 1572 aa25.27■■□□□ 1.64
SLC38A10-203ENST00000539643 KIF3BO15066 747 aa25.27■■□□□ 1.64
SLC38A10-203ENST00000539643 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
SLC38A10-203ENST00000539643 A2MP01023 1474 aa25.24■■□□□ 1.63
SLC38A10-203ENST00000539643 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
SLC38A10-203ENST00000539643 RALGAPBQ86X10 1494 aa25.23■■□□□ 1.63
SLC38A10-203ENST00000539643 RICTORQ6R327 1708 aa25.22■■□□□ 1.63
SLC38A10-203ENST00000539643 E9PCH4 1651 aa25.22■■□□□ 1.63
SLC38A10-203ENST00000539643 MROH1Q8NDA8 1641 aa25.21■■□□□ 1.63
SLC38A10-203ENST00000539643 TET3O43151 1660 aa25.21■■□□□ 1.63
SLC38A10-203ENST00000539643 KANK1Q14678 1352 aa25.21■■□□□ 1.63
SLC38A10-203ENST00000539643 PPRC1Q5VV67 1664 aaKnown RBP25.2■■□□□ 1.62
SLC38A10-203ENST00000539643 TSPOAP1O95153 1857 aa25.2■■□□□ 1.62
SLC38A10-203ENST00000539643 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
SLC38A10-203ENST00000539643 CCDC7Q96M83 1385 aa25.19■■□□□ 1.62
SLC38A10-203ENST00000539643 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
SLC38A10-203ENST00000539643 ABCA6Q8N139 1617 aa25.17■■□□□ 1.62
SLC38A10-203ENST00000539643 PTPRTO14522 1441 aa25.17■■□□□ 1.62
SLC38A10-203ENST00000539643 FRMPD1Q5SYB0 1578 aa25.16■■□□□ 1.62
SLC38A10-203ENST00000539643 DCAF11Q8TEB1 546 aa25.16■■□□□ 1.62
SLC38A10-203ENST00000539643 KIF13AQ9H1H9 1805 aa25.16■■□□□ 1.62
SLC38A10-203ENST00000539643 TRPM2O94759 1503 aa25.16■■□□□ 1.62
SLC38A10-203ENST00000539643 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
SLC38A10-203ENST00000539643 C11orf95C9JLR9 678 aaPredicted RBP25.14■■□□□ 1.62
SLC38A10-203ENST00000539643 SUPT16HQ9Y5B9 1047 aaKnown RBP25.14■■□□□ 1.62
SLC38A10-203ENST00000539643 ZNF326Q5BKZ1 582 aaKnown RBP25.13■■□□□ 1.61
SLC38A10-203ENST00000539643 BCORL1Q5H9F3 1711 aa25.13■■□□□ 1.61
SLC38A10-203ENST00000539643 SPHKAPQ2M3C7 1700 aa25.12■■□□□ 1.61
SLC38A10-203ENST00000539643 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
SLC38A10-203ENST00000539643 LMTK2Q8IWU2 1503 aa25.12■■□□□ 1.61
SLC38A10-203ENST00000539643 USP47Q96K76 1375 aa25.12■■□□□ 1.61
SLC38A10-203ENST00000539643 DIP2CQ9Y2E4 1556 aa25.12■■□□□ 1.61
SLC38A10-203ENST00000539643 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
SLC38A10-203ENST00000539643 ZMYM4Q5VZL5 1548 aa25.08■■□□□ 1.61
SLC38A10-203ENST00000539643 TRPM1Q7Z4N2 1603 aa25.08■■□□□ 1.61
SLC38A10-203ENST00000539643 YEATS2Q9ULM3 1422 aa25.07■■□□□ 1.6
SLC38A10-203ENST00000539643 EFCAB6Q5THR3 1501 aa25.07■■□□□ 1.6
SLC38A10-203ENST00000539643 KIF7Q2M1P5 1343 aa25.07■■□□□ 1.6
SLC38A10-203ENST00000539643 RGL3Q3MIN7 710 aa25.05■■□□□ 1.6
SLC38A10-203ENST00000539643 GGT6Q6P531 493 aa25.05■■□□□ 1.6
SLC38A10-203ENST00000539643 CEP152O94986 1710 aa25.05■■□□□ 1.6
SLC38A10-203ENST00000539643 NEURL4Q96JN8 1562 aa25.04■■□□□ 1.6
SLC38A10-203ENST00000539643 CARD11Q9BXL7 1154 aa25.04■■□□□ 1.6
SLC38A10-203ENST00000539643 CLTCL1P53675 1640 aa25.04■■□□□ 1.6
SLC38A10-203ENST00000539643 GPRASP1Q5JY77 1395 aa25.03■■□□□ 1.6
SLC38A10-203ENST00000539643 LAMC1P11047 1609 aa25.01■■□□□ 1.59
SLC38A10-203ENST00000539643 ROCK2O75116 1388 aaKnown RBP25■■□□□ 1.59
SLC38A10-203ENST00000539643 ARID4BQ4LE39 1312 aaPredicted RBP25■■□□□ 1.59
SLC38A10-203ENST00000539643 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
SLC38A10-203ENST00000539643 PRKRIP1Q9H875 184 aaPredicted RBP24.98■■□□□ 1.59
SLC38A10-203ENST00000539643 WASHC2CQ9Y4E1 1318 aa24.97■■□□□ 1.59
SLC38A10-203ENST00000539643 COL17A1Q9UMD9 1497 aaPredicted RBP24.97■■□□□ 1.59
SLC38A10-203ENST00000539643 ABCC3O15438 1527 aa24.94■■□□□ 1.58
SLC38A10-203ENST00000539643 MADDQ8WXG6 1647 aa24.92■■□□□ 1.58
SLC38A10-203ENST00000539643 HNRNPUQ00839 825 aaKnown RBP eCLIP24.91■■□□□ 1.58
SLC38A10-203ENST00000539643 NPATQ14207 1427 aa24.91■■□□□ 1.58
SLC38A10-203ENST00000539643 NBPF1Q3BBV0 1214 aa24.91■■□□□ 1.58
SLC38A10-203ENST00000539643 ST20-MTHFSA0A0A6YYL1 179 aa24.9■■□□□ 1.58
SLC38A10-203ENST00000539643 REREQ9P2R6 1566 aa24.9■■□□□ 1.58
SLC38A10-203ENST00000539643 UGGT1Q9NYU2 1555 aa24.88■■□□□ 1.57
SLC38A10-203ENST00000539643 CCDC184Q52MB2 194 aa24.88■■□□□ 1.57
SLC38A10-203ENST00000539643 CAMSAP1Q5T5Y3 1602 aa24.86■■□□□ 1.57
SLC38A10-203ENST00000539643 KIF1BO60333 1816 aa24.86■■□□□ 1.57
SLC38A10-203ENST00000539643 ZC3H13Q5T200 1668 aaKnown RBP24.86■■□□□ 1.57
SLC38A10-203ENST00000539643 FKBP8Q14318 412 aa24.85■■□□□ 1.57
SLC38A10-203ENST00000539643 AGLP35573 1532 aa24.85■■□□□ 1.57
SLC38A10-203ENST00000539643 NEFLP07196 543 aa24.84■■□□□ 1.57
SLC38A10-203ENST00000539643 POLR3GLQ9BT43 218 aa24.84■■□□□ 1.57
SLC38A10-203ENST00000539643 MRS2Q9HD23 443 aa24.84■■□□□ 1.57
SLC38A10-203ENST00000539643 MYOM2P54296 1465 aa24.83■■□□□ 1.57
SLC38A10-203ENST00000539643 ARHGAP31Q2M1Z3 1444 aa24.83■■□□□ 1.57
SLC38A10-203ENST00000539643 CFAP65Q6ZU64 1925 aaKnown RBP24.83■■□□□ 1.57
SLC38A10-203ENST00000539643 ADGRB3O60242 1522 aa24.82■■□□□ 1.56
SLC38A10-203ENST00000539643 NOS1P29475 1434 aa24.81■■□□□ 1.56
SLC38A10-203ENST00000539643 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms