RNA–Protein interactions for RNA: ENST00000539523.1

LMNTD1-206, Transcript of lamin tail domain containing 1, humanhuman

TSL 3

Gene LMNTD1, Length 454 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-206ENST00000539523 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
LMNTD1-206ENST00000539523 FOSBP53539 338 aa12.35□□□□□ -0.43
LMNTD1-206ENST00000539523 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
LMNTD1-206ENST00000539523 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
LMNTD1-206ENST00000539523 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.43
LMNTD1-206ENST00000539523 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
LMNTD1-206ENST00000539523 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
LMNTD1-206ENST00000539523 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
LMNTD1-206ENST00000539523 AMHR2Q16671 573 aa12.31□□□□□ -0.44
LMNTD1-206ENST00000539523 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
LMNTD1-206ENST00000539523 SNPHO15079 494 aa12.28□□□□□ -0.44
LMNTD1-206ENST00000539523 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
LMNTD1-206ENST00000539523 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
LMNTD1-206ENST00000539523 C6orf132Q5T0Z8 1188 aa12.27□□□□□ -0.45
LMNTD1-206ENST00000539523 PARP9Q8IXQ6 854 aa12.27□□□□□ -0.45
LMNTD1-206ENST00000539523 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
LMNTD1-206ENST00000539523 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
LMNTD1-206ENST00000539523 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
LMNTD1-206ENST00000539523 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
LMNTD1-206ENST00000539523 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
LMNTD1-206ENST00000539523 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
LMNTD1-206ENST00000539523 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.45
LMNTD1-206ENST00000539523 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
LMNTD1-206ENST00000539523 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
LMNTD1-206ENST00000539523 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
LMNTD1-206ENST00000539523 TIMELESSQ9UNS1 1208 aa12.2□□□□□ -0.46
LMNTD1-206ENST00000539523 HOXB1P14653 301 aaPredicted RBP12.18□□□□□ -0.46
LMNTD1-206ENST00000539523 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
LMNTD1-206ENST00000539523 OATP04181 439 aa12.17□□□□□ -0.46
LMNTD1-206ENST00000539523 CLCN1P35523 988 aa12.17□□□□□ -0.46
LMNTD1-206ENST00000539523 PRSS12P56730 875 aa12.16□□□□□ -0.46
LMNTD1-206ENST00000539523 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
LMNTD1-206ENST00000539523 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
LMNTD1-206ENST00000539523 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
LMNTD1-206ENST00000539523 METTL3Q86U44 580 aaKnown RBP12.15□□□□□ -0.46
LMNTD1-206ENST00000539523 PTPREP23469 700 aa12.14□□□□□ -0.47
LMNTD1-206ENST00000539523 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
LMNTD1-206ENST00000539523 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
LMNTD1-206ENST00000539523 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
LMNTD1-206ENST00000539523 ADGRG1Q9Y653 693 aa12.14□□□□□ -0.47
LMNTD1-206ENST00000539523 TTC13Q8NBP0 860 aa12.13□□□□□ -0.47
LMNTD1-206ENST00000539523 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
LMNTD1-206ENST00000539523 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
LMNTD1-206ENST00000539523 C14orf37Q86TY3 774 aa12.12□□□□□ -0.47
LMNTD1-206ENST00000539523 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
LMNTD1-206ENST00000539523 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
LMNTD1-206ENST00000539523 COL9A1P20849 921 aa12.11□□□□□ -0.47
LMNTD1-206ENST00000539523 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
LMNTD1-206ENST00000539523 MS4A1P11836 297 aa12.1□□□□□ -0.47
LMNTD1-206ENST00000539523 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
LMNTD1-206ENST00000539523 KCNH8Q96L42 1107 aa12.09□□□□□ -0.47
LMNTD1-206ENST00000539523 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
LMNTD1-206ENST00000539523 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
LMNTD1-206ENST00000539523 LHX8Q68G74 356 aa12.07□□□□□ -0.48
LMNTD1-206ENST00000539523 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
LMNTD1-206ENST00000539523 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
LMNTD1-206ENST00000539523 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
LMNTD1-206ENST00000539523 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
LMNTD1-206ENST00000539523 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
LMNTD1-206ENST00000539523 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
LMNTD1-206ENST00000539523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
LMNTD1-206ENST00000539523 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.49
LMNTD1-206ENST00000539523 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
LMNTD1-206ENST00000539523 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
LMNTD1-206ENST00000539523 ERBB3P21860 1342 aa12.01□□□□□ -0.49
LMNTD1-206ENST00000539523 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
LMNTD1-206ENST00000539523 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
LMNTD1-206ENST00000539523 RCCD1A6NED2 376 aa11.99□□□□□ -0.49
LMNTD1-206ENST00000539523 EYA1Q99502 592 aa11.99□□□□□ -0.49
LMNTD1-206ENST00000539523 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
LMNTD1-206ENST00000539523 PROX2Q3B8N5 592 aa11.98□□□□□ -0.49
LMNTD1-206ENST00000539523 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
LMNTD1-206ENST00000539523 TATDN2Q93075 761 aa11.98□□□□□ -0.49
LMNTD1-206ENST00000539523 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
LMNTD1-206ENST00000539523 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
LMNTD1-206ENST00000539523 DNAJB2P25686 324 aa11.96□□□□□ -0.49
LMNTD1-206ENST00000539523 EMP3P54852 163 aa11.96□□□□□ -0.49
LMNTD1-206ENST00000539523 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
LMNTD1-206ENST00000539523 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
LMNTD1-206ENST00000539523 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
LMNTD1-206ENST00000539523 ST18O60284 1047 aa11.94□□□□□ -0.5
LMNTD1-206ENST00000539523 PSEN2P49810 448 aa11.94□□□□□ -0.5
LMNTD1-206ENST00000539523 SULF1Q8IWU6 871 aa11.93□□□□□ -0.5
LMNTD1-206ENST00000539523 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
LMNTD1-206ENST00000539523 SMAPO00193 183 aa11.92□□□□□ -0.5
LMNTD1-206ENST00000539523 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
LMNTD1-206ENST00000539523 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
LMNTD1-206ENST00000539523 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
LMNTD1-206ENST00000539523 TMEM134Q9H6X4 195 aa11.91□□□□□ -0.5
LMNTD1-206ENST00000539523 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
LMNTD1-206ENST00000539523 SKIV2LQ15477 1246 aaKnown RBP11.9□□□□□ -0.5
LMNTD1-206ENST00000539523 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
LMNTD1-206ENST00000539523 PBX2P40425 430 aa11.89□□□□□ -0.51
LMNTD1-206ENST00000539523 DIXDC1Q155Q3 683 aa11.89□□□□□ -0.51
LMNTD1-206ENST00000539523 AXIN2Q9Y2T1 843 aa11.88□□□□□ -0.51
LMNTD1-206ENST00000539523 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
LMNTD1-206ENST00000539523 CD46P15529 392 aa11.87□□□□□ -0.51
LMNTD1-206ENST00000539523 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
LMNTD1-206ENST00000539523 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
LMNTD1-206ENST00000539523 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms