RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
CD4-209ENST00000539492 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
CD4-209ENST00000539492 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
CD4-209ENST00000539492 PZPP20742 1482 aa13.02□□□□□ -0.33
CD4-209ENST00000539492 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
CD4-209ENST00000539492 TNRQ92752 1358 aa13□□□□□ -0.33
CD4-209ENST00000539492 KIF3BO15066 747 aa13□□□□□ -0.33
CD4-209ENST00000539492 CFAP65Q6ZU64 1925 aaKnown RBP12.99□□□□□ -0.33
CD4-209ENST00000539492 NEURL4Q96JN8 1562 aa12.98□□□□□ -0.33
CD4-209ENST00000539492 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
CD4-209ENST00000539492 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
CD4-209ENST00000539492 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
CD4-209ENST00000539492 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
CD4-209ENST00000539492 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
CD4-209ENST00000539492 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.34
CD4-209ENST00000539492 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
CD4-209ENST00000539492 VPS8Q8N3P4 1428 aa12.96□□□□□ -0.34
CD4-209ENST00000539492 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
CD4-209ENST00000539492 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
CD4-209ENST00000539492 CPS1P31327 1500 aa12.95□□□□□ -0.34
CD4-209ENST00000539492 SOCS7O14512 581 aa12.95□□□□□ -0.34
CD4-209ENST00000539492 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
CD4-209ENST00000539492 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
CD4-209ENST00000539492 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
CD4-209ENST00000539492 DEPDC5O75140 1603 aa12.94□□□□□ -0.34
CD4-209ENST00000539492 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
CD4-209ENST00000539492 UGGT1Q9NYU2 1555 aa12.94□□□□□ -0.34
CD4-209ENST00000539492 ABCC3O15438 1527 aa12.93□□□□□ -0.34
CD4-209ENST00000539492 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
CD4-209ENST00000539492 CEP152O94986 1710 aa12.92□□□□□ -0.34
CD4-209ENST00000539492 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
CD4-209ENST00000539492 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
CD4-209ENST00000539492 MED14O60244 1454 aa12.91□□□□□ -0.34
CD4-209ENST00000539492 VWDEQ8N2E2 1590 aa12.91□□□□□ -0.34
CD4-209ENST00000539492 ANKLE2Q86XL3 938 aa12.91□□□□□ -0.34
CD4-209ENST00000539492 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
CD4-209ENST00000539492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
CD4-209ENST00000539492 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
CD4-209ENST00000539492 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
CD4-209ENST00000539492 MYOM3Q5VTT5 1437 aa12.89□□□□□ -0.35
CD4-209ENST00000539492 ERVK-7P63135 1459 aa12.89□□□□□ -0.35
CD4-209ENST00000539492 CROCC2H7BZ55 1655 aa12.88□□□□□ -0.35
CD4-209ENST00000539492 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
CD4-209ENST00000539492 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
CD4-209ENST00000539492 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
CD4-209ENST00000539492 TOM1O60784 492 aa12.87□□□□□ -0.35
CD4-209ENST00000539492 SYNMO15061 1565 aa12.86□□□□□ -0.35
CD4-209ENST00000539492 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
CD4-209ENST00000539492 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
CD4-209ENST00000539492 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
CD4-209ENST00000539492 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
CD4-209ENST00000539492 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
CD4-209ENST00000539492 HSPA1LP34931 641 aa12.83□□□□□ -0.36
CD4-209ENST00000539492 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
CD4-209ENST00000539492 ALKQ9UM73 1620 aa12.83□□□□□ -0.36
CD4-209ENST00000539492 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
CD4-209ENST00000539492 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
CD4-209ENST00000539492 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
CD4-209ENST00000539492 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
CD4-209ENST00000539492 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
CD4-209ENST00000539492 SLIT1O75093 1534 aa12.81□□□□□ -0.36
CD4-209ENST00000539492 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
CD4-209ENST00000539492 ARHGAP23Q9P227 1491 aa12.8□□□□□ -0.36
CD4-209ENST00000539492 ABCC5O15440 1437 aa12.79□□□□□ -0.36
CD4-209ENST00000539492 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
CD4-209ENST00000539492 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
CD4-209ENST00000539492 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
CD4-209ENST00000539492 DAPK1P53355 1430 aa12.78□□□□□ -0.36
CD4-209ENST00000539492 APLP2Q06481 763 aa12.76□□□□□ -0.37
CD4-209ENST00000539492 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
CD4-209ENST00000539492 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
CD4-209ENST00000539492 KANK1Q14678 1352 aa12.75□□□□□ -0.37
CD4-209ENST00000539492 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
CD4-209ENST00000539492 LTKP29376 864 aa12.74□□□□□ -0.37
CD4-209ENST00000539492 TXNDC2Q86VQ3 553 aa12.74□□□□□ -0.37
CD4-209ENST00000539492 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
CD4-209ENST00000539492 ANKRD30AQ9BXX3 1397 aa12.73□□□□□ -0.37
CD4-209ENST00000539492 TMEM2Q9UHN6 1383 aa12.73□□□□□ -0.37
CD4-209ENST00000539492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
CD4-209ENST00000539492 EID1Q9Y6B2 187 aa12.73□□□□□ -0.37
CD4-209ENST00000539492 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
CD4-209ENST00000539492 MYO5BQ9ULV0 1848 aa12.71□□□□□ -0.38
CD4-209ENST00000539492 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
CD4-209ENST00000539492 ADGRB3O60242 1522 aa12.7□□□□□ -0.38
CD4-209ENST00000539492 ADGRL2O95490 1459 aa12.7□□□□□ -0.38
CD4-209ENST00000539492 NOS1P29475 1434 aa12.7□□□□□ -0.38
CD4-209ENST00000539492 TET3O43151 1660 aa12.68□□□□□ -0.38
CD4-209ENST00000539492 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
CD4-209ENST00000539492 IDI1Q13907 227 aa12.67□□□□□ -0.38
CD4-209ENST00000539492 SENP3Q9H4L4 574 aaPredicted RBP12.67□□□□□ -0.38
CD4-209ENST00000539492 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
CD4-209ENST00000539492 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
CD4-209ENST00000539492 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
CD4-209ENST00000539492 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
CD4-209ENST00000539492 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
CD4-209ENST00000539492 KCNA6P17658 529 aa12.65□□□□□ -0.38
CD4-209ENST00000539492 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
CD4-209ENST00000539492 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
CD4-209ENST00000539492 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
CD4-209ENST00000539492 ROBO1Q9Y6N7 1651 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms