RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
LDHC-206ENST00000539369 LCE2BO14633 110 aa10.88□□□□□ -0.67
LDHC-206ENST00000539369 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
LDHC-206ENST00000539369 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
LDHC-206ENST00000539369 MFSD10Q14728 455 aa10.87□□□□□ -0.67
LDHC-206ENST00000539369 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
LDHC-206ENST00000539369 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
LDHC-206ENST00000539369 LAPTM4BQ86VI4 370 aa10.86□□□□□ -0.67
LDHC-206ENST00000539369 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
LDHC-206ENST00000539369 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
LDHC-206ENST00000539369 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
LDHC-206ENST00000539369 KCNC4Q03721 635 aa10.82□□□□□ -0.68
LDHC-206ENST00000539369 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
LDHC-206ENST00000539369 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
LDHC-206ENST00000539369 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
LDHC-206ENST00000539369 PHF14O94880 888 aa10.81□□□□□ -0.68
LDHC-206ENST00000539369 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
LDHC-206ENST00000539369 DCAF8L2P0C7V8 631 aa10.8□□□□□ -0.68
LDHC-206ENST00000539369 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
LDHC-206ENST00000539369 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
LDHC-206ENST00000539369 TRIM6-TRIM34B2RNG4 842 aa10.75□□□□□ -0.69
LDHC-206ENST00000539369 FAM98CQ17RN3 349 aaKnown RBP10.74□□□□□ -0.69
LDHC-206ENST00000539369 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
LDHC-206ENST00000539369 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
LDHC-206ENST00000539369 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
LDHC-206ENST00000539369 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
LDHC-206ENST00000539369 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
LDHC-206ENST00000539369 GFRA3O60609 400 aa10.71□□□□□ -0.69
LDHC-206ENST00000539369 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
LDHC-206ENST00000539369 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
LDHC-206ENST00000539369 EPAS1Q99814 870 aa10.7□□□□□ -0.7
LDHC-206ENST00000539369 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
LDHC-206ENST00000539369 CAMK2BQ13554 666 aa10.67□□□□□ -0.7
LDHC-206ENST00000539369 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
LDHC-206ENST00000539369 DPYSL4O14531 572 aa10.66□□□□□ -0.7
LDHC-206ENST00000539369 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
LDHC-206ENST00000539369 PRKD2Q9BZL6 878 aa10.64□□□□□ -0.71
LDHC-206ENST00000539369 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
LDHC-206ENST00000539369 DDX12PQ92771 950 aa10.63□□□□□ -0.71
LDHC-206ENST00000539369 NRG2O14511 850 aaPredicted RBP10.61□□□□□ -0.71
LDHC-206ENST00000539369 TSR1Q2NL82 804 aaKnown RBP10.61□□□□□ -0.71
LDHC-206ENST00000539369 PPP4CP60510 307 aa10.6□□□□□ -0.71
LDHC-206ENST00000539369 C3orf80F5H4A9 247 aa10.59□□□□□ -0.71
LDHC-206ENST00000539369 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
LDHC-206ENST00000539369 SMAPO00193 183 aa10.58□□□□□ -0.72
LDHC-206ENST00000539369 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
LDHC-206ENST00000539369 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
LDHC-206ENST00000539369 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
LDHC-206ENST00000539369 MTRQ99707 1265 aa10.58□□□□□ -0.72
LDHC-206ENST00000539369 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
LDHC-206ENST00000539369 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
LDHC-206ENST00000539369 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
LDHC-206ENST00000539369 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
LDHC-206ENST00000539369 NBR1Q14596 966 aa10.54□□□□□ -0.72
LDHC-206ENST00000539369 IL21Q9HBE4 155 aa10.54□□□□□ -0.72
LDHC-206ENST00000539369 RB1CC1Q8TDY2 1594 aa10.53□□□□□ -0.72
LDHC-206ENST00000539369 MAP3K7O43318 606 aa10.53□□□□□ -0.72
LDHC-206ENST00000539369 CDCA7LQ96GN5 454 aa10.53□□□□□ -0.72
LDHC-206ENST00000539369 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
LDHC-206ENST00000539369 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
LDHC-206ENST00000539369 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
LDHC-206ENST00000539369 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.5□□□□□ -0.73
LDHC-206ENST00000539369 APLP1P51693 650 aa10.49□□□□□ -0.73
LDHC-206ENST00000539369 PRSS12P56730 875 aa10.49□□□□□ -0.73
LDHC-206ENST00000539369 PDIA6Q15084 440 aa10.49□□□□□ -0.73
LDHC-206ENST00000539369 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
LDHC-206ENST00000539369 TATDN2Q93075 761 aa10.48□□□□□ -0.73
LDHC-206ENST00000539369 PDZRN3Q9UPQ7 1066 aa10.48□□□□□ -0.73
LDHC-206ENST00000539369 ZNF775Q96BV0 537 aaPredicted RBP10.47□□□□□ -0.73
LDHC-206ENST00000539369 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
LDHC-206ENST00000539369 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
LDHC-206ENST00000539369 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
LDHC-206ENST00000539369 TRIM67Q6ZTA4 783 aa10.41□□□□□ -0.74
LDHC-206ENST00000539369 SPRYD3Q8NCJ5 442 aa10.41□□□□□ -0.74
LDHC-206ENST00000539369 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
LDHC-206ENST00000539369 RNF40O75150 1001 aa10.4□□□□□ -0.74
LDHC-206ENST00000539369 NUDT18Q6ZVK8 323 aa10.4□□□□□ -0.74
LDHC-206ENST00000539369 CERKQ8TCT0 537 aa10.4□□□□□ -0.74
LDHC-206ENST00000539369 NACADO15069 1562 aa10.39□□□□□ -0.75
LDHC-206ENST00000539369 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
LDHC-206ENST00000539369 COPS2P61201 443 aa10.39□□□□□ -0.75
LDHC-206ENST00000539369 EMID1Q96A84 441 aaPredicted RBP10.39□□□□□ -0.75
LDHC-206ENST00000539369 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
LDHC-206ENST00000539369 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
LDHC-206ENST00000539369 OSBPP22059 807 aa10.34□□□□□ -0.75
LDHC-206ENST00000539369 SWT1Q5T5J6 900 aaKnown RBP10.34□□□□□ -0.75
LDHC-206ENST00000539369 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
LDHC-206ENST00000539369 POTECB2RU33 542 aa10.33□□□□□ -0.76
LDHC-206ENST00000539369 ZPR1O75312 459 aa10.33□□□□□ -0.76
LDHC-206ENST00000539369 GGCXP38435 758 aa10.33□□□□□ -0.76
LDHC-206ENST00000539369 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
LDHC-206ENST00000539369 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
LDHC-206ENST00000539369 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
LDHC-206ENST00000539369 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
LDHC-206ENST00000539369 MYT1Q01538 1121 aa10.31□□□□□ -0.76
LDHC-206ENST00000539369 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
LDHC-206ENST00000539369 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
LDHC-206ENST00000539369 SLC19A1P41440 591 aa10.29□□□□□ -0.76
LDHC-206ENST00000539369 ARIH1Q9Y4X5 557 aaPredicted RBP10.29□□□□□ -0.76
LDHC-206ENST00000539369 BICRAQ9NZM4 1560 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms