RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 UACAQ9BZF9 1416 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 ABCA8O94911 1581 aa8.02□□□□□ -1.13
LINC02408-202ENST00000538573 RIMBP3CA6NJZ7 1639 aa8.01□□□□□ -1.13
LINC02408-202ENST00000538573 RIMBP3BA6NNM3 1639 aa8.01□□□□□ -1.13
LINC02408-202ENST00000538573 RIMBP3Q9UFD9 1639 aa8.01□□□□□ -1.13
LINC02408-202ENST00000538573 KANK4Q5T7N3 995 aaPredicted RBP8.01□□□□□ -1.13
LINC02408-202ENST00000538573 CABP2Q9NPB3 220 aa8.01□□□□□ -1.13
LINC02408-202ENST00000538573 EPRSP07814 1512 aaKnown RBP8.01□□□□□ -1.13
LINC02408-202ENST00000538573 TIAM1Q13009 1591 aa8.01□□□□□ -1.13
LINC02408-202ENST00000538573 NUP153P49790 1475 aaKnown RBP8□□□□□ -1.13
LINC02408-202ENST00000538573 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
LINC02408-202ENST00000538573 MAP3K1Q13233 1512 aa8□□□□□ -1.13
LINC02408-202ENST00000538573 CFAP43Q8NDM7 1665 aa8□□□□□ -1.13
LINC02408-202ENST00000538573 CYB5RLQ6IPT4 315 aa8□□□□□ -1.13
LINC02408-202ENST00000538573 CDK13Q14004 1512 aaKnown RBP7.99□□□□□ -1.13
LINC02408-202ENST00000538573 ABCC2Q92887 1545 aa7.99□□□□□ -1.13
LINC02408-202ENST00000538573 CDK11AQ9UQ88 783 aaPredicted RBP7.99□□□□□ -1.13
LINC02408-202ENST00000538573 MTUS2Q5JR59 1369 aa7.98□□□□□ -1.13
LINC02408-202ENST00000538573 UHRF1BP1LA0JNW5 1464 aa7.98□□□□□ -1.13
LINC02408-202ENST00000538573 ATP10BO94823 1461 aa7.98□□□□□ -1.13
LINC02408-202ENST00000538573 PLEKHD1A6NEE1 506 aa7.97□□□□□ -1.13
LINC02408-202ENST00000538573 PDCD7Q8N8D1 485 aaKnown RBP7.97□□□□□ -1.13
LINC02408-202ENST00000538573 LRRC9Q6ZRR7 1453 aa7.97□□□□□ -1.13
LINC02408-202ENST00000538573 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.13
LINC02408-202ENST00000538573 MARVELD3Q96A59 401 aa7.95□□□□□ -1.14
LINC02408-202ENST00000538573 ZCCHC11Q5TAX3 1644 aaKnown RBP7.95□□□□□ -1.14
LINC02408-202ENST00000538573 MAGI3Q5TCQ9 1506 aa7.94□□□□□ -1.14
LINC02408-202ENST00000538573 EHBP1L1Q8N3D4 1523 aa7.94□□□□□ -1.14
LINC02408-202ENST00000538573 KDM5BQ9UGL1 1544 aa7.94□□□□□ -1.14
LINC02408-202ENST00000538573 SUPT6HQ7KZ85 1726 aaKnown RBP7.93□□□□□ -1.14
LINC02408-202ENST00000538573 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
LINC02408-202ENST00000538573 KCNH8Q96L42 1107 aa7.93□□□□□ -1.14
LINC02408-202ENST00000538573 DNAJC5Q9H3Z4 198 aa7.93□□□□□ -1.14
LINC02408-202ENST00000538573 TROQ12816 1431 aaPredicted RBP7.93□□□□□ -1.14
LINC02408-202ENST00000538573 EMP3P54852 163 aa7.92□□□□□ -1.14
LINC02408-202ENST00000538573 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
LINC02408-202ENST00000538573 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
LINC02408-202ENST00000538573 NCOA2Q15596 1464 aa7.91□□□□□ -1.14
LINC02408-202ENST00000538573 KIF14Q15058 1648 aa7.89□□□□□ -1.15
LINC02408-202ENST00000538573 ASXL2Q76L83 1435 aa7.89□□□□□ -1.15
LINC02408-202ENST00000538573 PHLDB1Q86UU1 1377 aa7.89□□□□□ -1.15
LINC02408-202ENST00000538573 CCNB3Q8WWL7 1395 aa7.89□□□□□ -1.15
LINC02408-202ENST00000538573 RIOK3O14730 519 aaKnown RBP7.89□□□□□ -1.15
LINC02408-202ENST00000538573 EFCAB3Q8N7B9 438 aa7.89□□□□□ -1.15
LINC02408-202ENST00000538573 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
LINC02408-202ENST00000538573 TAOK2Q9UL54 1235 aa7.88□□□□□ -1.15
LINC02408-202ENST00000538573 WDR7Q9Y4E6 1490 aa7.87□□□□□ -1.15
LINC02408-202ENST00000538573 FAM50AQ14320 339 aaKnown RBP7.87□□□□□ -1.15
LINC02408-202ENST00000538573 ILDR1Q86SU0 546 aaPredicted RBP7.87□□□□□ -1.15
LINC02408-202ENST00000538573 MYOM3Q5VTT5 1437 aa7.86□□□□□ -1.15
LINC02408-202ENST00000538573 VGFO15240 615 aaPredicted RBP7.86□□□□□ -1.15
LINC02408-202ENST00000538573 MYT1Q01538 1121 aa7.86□□□□□ -1.15
LINC02408-202ENST00000538573 ZNF777Q9ULD5 760 aaPredicted RBP7.86□□□□□ -1.15
LINC02408-202ENST00000538573 ABCC10Q5T3U5 1492 aa7.86□□□□□ -1.15
LINC02408-202ENST00000538573 MAPKBP1O60336 1514 aa7.85□□□□□ -1.15
LINC02408-202ENST00000538573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC02408-202ENST00000538573 FAM205CA6NFA0 338 aa7.85□□□□□ -1.15
LINC02408-202ENST00000538573 ITGAEP38570 1179 aa7.85□□□□□ -1.15
LINC02408-202ENST00000538573 CFDP1Q9UEE9 299 aaPredicted RBP7.85□□□□□ -1.15
LINC02408-202ENST00000538573 CDC42BPAQ5VT25 1732 aa7.85□□□□□ -1.15
LINC02408-202ENST00000538573 ITSN2Q9NZM3 1697 aa7.85□□□□□ -1.15
LINC02408-202ENST00000538573 FGD6Q6ZV73 1430 aa7.85□□□□□ -1.15
LINC02408-202ENST00000538573 RRBP1Q9P2E9 1410 aaKnown RBP7.85□□□□□ -1.15
LINC02408-202ENST00000538573 TTC37Q6PGP7 1564 aa7.84□□□□□ -1.15
LINC02408-202ENST00000538573 GPATCH8Q9UKJ3 1502 aaKnown RBP7.84□□□□□ -1.15
LINC02408-202ENST00000538573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.84□□□□□ -1.15
LINC02408-202ENST00000538573 SOX12O15370 315 aa7.84□□□□□ -1.15
LINC02408-202ENST00000538573 ZNF710Q8N1W2 664 aa7.84□□□□□ -1.15
LINC02408-202ENST00000538573 ZFP91Q96JP5 570 aaPredicted RBP7.84□□□□□ -1.15
LINC02408-202ENST00000538573 HS3ST6Q96QI5 342 aa7.84□□□□□ -1.15
LINC02408-202ENST00000538573 PTPN23Q9H3S7 1636 aa7.84□□□□□ -1.15
LINC02408-202ENST00000538573 MYO5CQ9NQX4 1742 aa7.83□□□□□ -1.16
LINC02408-202ENST00000538573 MIA2Q96PC5 1412 aa7.83□□□□□ -1.16
LINC02408-202ENST00000538573 ZNF644Q9H582 1327 aaPredicted RBP7.82□□□□□ -1.16
LINC02408-202ENST00000538573 ABCA9Q8IUA7 1624 aa7.82□□□□□ -1.16
LINC02408-202ENST00000538573 FAM69CQ0P6D2 419 aa7.82□□□□□ -1.16
LINC02408-202ENST00000538573 CDC42BPBQ9Y5S2 1711 aa7.82□□□□□ -1.16
LINC02408-202ENST00000538573 ARHGAP5Q13017 1502 aa7.82□□□□□ -1.16
LINC02408-202ENST00000538573 PREX2Q70Z35 1606 aa7.81□□□□□ -1.16
LINC02408-202ENST00000538573 PLCH2O75038 1416 aa7.81□□□□□ -1.16
LINC02408-202ENST00000538573 EFCAB2Q5VUJ9 269 aa7.81□□□□□ -1.16
LINC02408-202ENST00000538573 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
LINC02408-202ENST00000538573 DOK7Q18PE1 504 aa7.8□□□□□ -1.16
LINC02408-202ENST00000538573 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
LINC02408-202ENST00000538573 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
LINC02408-202ENST00000538573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.8□□□□□ -1.16
LINC02408-202ENST00000538573 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
LINC02408-202ENST00000538573 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
LINC02408-202ENST00000538573 HNRNPMP52272 730 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC02408-202ENST00000538573 RNF25Q96BH1 459 aaPredicted RBP7.79□□□□□ -1.16
LINC02408-202ENST00000538573 CAMSAP2Q08AD1 1489 aa7.79□□□□□ -1.16
LINC02408-202ENST00000538573 GLI2P10070 1586 aa7.79□□□□□ -1.16
LINC02408-202ENST00000538573 ECM2O94769 699 aaPredicted RBP7.78□□□□□ -1.16
LINC02408-202ENST00000538573 CHIC2Q9UKJ5 165 aa7.78□□□□□ -1.16
LINC02408-202ENST00000538573 PHF8Q9UPP1 1060 aa7.78□□□□□ -1.16
LINC02408-202ENST00000538573 STK24Q9Y6E0 443 aa7.78□□□□□ -1.16
LINC02408-202ENST00000538573 DIP2BQ9P265 1576 aa7.78□□□□□ -1.16
LINC02408-202ENST00000538573 TSPOAP1O95153 1857 aa7.78□□□□□ -1.16
LINC02408-202ENST00000538573 SAMD9LQ8IVG5 1584 aa7.77□□□□□ -1.17
LINC02408-202ENST00000538573 FANCAO15360 1455 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms