RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 KIDINS220Q9ULH0 1771 aa11.26□□□□□ -0.61
LRTOMT-215ENST00000538478 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
LRTOMT-215ENST00000538478 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
LRTOMT-215ENST00000538478 STRCP1A6NGW2 1772 aa11.25□□□□□ -0.61
LRTOMT-215ENST00000538478 KIF14Q15058 1648 aa11.24□□□□□ -0.61
LRTOMT-215ENST00000538478 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
LRTOMT-215ENST00000538478 POLR1AO95602 1720 aaPredicted RBP11.24□□□□□ -0.61
LRTOMT-215ENST00000538478 PTPRKQ15262 1439 aa11.24□□□□□ -0.61
LRTOMT-215ENST00000538478 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
LRTOMT-215ENST00000538478 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
LRTOMT-215ENST00000538478 CDC42BPBQ9Y5S2 1711 aa11.22□□□□□ -0.61
LRTOMT-215ENST00000538478 ARHGAP5Q13017 1502 aa11.2□□□□□ -0.62
LRTOMT-215ENST00000538478 ITSN2Q9NZM3 1697 aa11.18□□□□□ -0.62
LRTOMT-215ENST00000538478 A2ML1A8K2U0 1454 aa11.18□□□□□ -0.62
LRTOMT-215ENST00000538478 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
LRTOMT-215ENST00000538478 ABCC1P33527 1531 aa11.17□□□□□ -0.62
LRTOMT-215ENST00000538478 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
LRTOMT-215ENST00000538478 XIRP1Q702N8 1843 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-215ENST00000538478 RNF17Q9BXT8 1623 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-215ENST00000538478 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
LRTOMT-215ENST00000538478 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
LRTOMT-215ENST00000538478 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-215ENST00000538478 MED14O60244 1454 aa11.12□□□□□ -0.63
LRTOMT-215ENST00000538478 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
LRTOMT-215ENST00000538478 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
LRTOMT-215ENST00000538478 PREX2Q70Z35 1606 aa11.11□□□□□ -0.63
LRTOMT-215ENST00000538478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.63
LRTOMT-215ENST00000538478 NPHP4O75161 1426 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-215ENST00000538478 FBXO31Q5XUX0 539 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-215ENST00000538478 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
LRTOMT-215ENST00000538478 IQGAP1P46940 1657 aa11.09□□□□□ -0.63
LRTOMT-215ENST00000538478 GGT6Q6P531 493 aa11.09□□□□□ -0.63
LRTOMT-215ENST00000538478 ANKLE2Q86XL3 938 aa11.09□□□□□ -0.63
LRTOMT-215ENST00000538478 SYNMO15061 1565 aa11.08□□□□□ -0.64
LRTOMT-215ENST00000538478 CDC42BPAQ5VT25 1732 aa11.08□□□□□ -0.64
LRTOMT-215ENST00000538478 TNRQ92752 1358 aa11.06□□□□□ -0.64
LRTOMT-215ENST00000538478 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
LRTOMT-215ENST00000538478 FAM135BQ49AJ0 1406 aa11.06□□□□□ -0.64
LRTOMT-215ENST00000538478 A2MP01023 1474 aa11.06□□□□□ -0.64
LRTOMT-215ENST00000538478 ZC3H13Q5T200 1668 aaKnown RBP11.05□□□□□ -0.64
LRTOMT-215ENST00000538478 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
LRTOMT-215ENST00000538478 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
LRTOMT-215ENST00000538478 SPAG9O60271 1321 aaKnown RBP11.04□□□□□ -0.64
LRTOMT-215ENST00000538478 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
LRTOMT-215ENST00000538478 INO80Q9ULG1 1556 aaPredicted RBP11.03□□□□□ -0.64
LRTOMT-215ENST00000538478 HNRNPMP52272 730 aaKnown RBP eCLIP11.03□□□□□ -0.64
LRTOMT-215ENST00000538478 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
LRTOMT-215ENST00000538478 CDK11AQ9UQ88 783 aaPredicted RBP11.03□□□□□ -0.64
LRTOMT-215ENST00000538478 ROBO1Q9Y6N7 1651 aa11.03□□□□□ -0.64
LRTOMT-215ENST00000538478 THEMISQ8N1K5 641 aaPredicted RBP11.02□□□□□ -0.65
LRTOMT-215ENST00000538478 CLIP1P30622 1438 aa11.01□□□□□ -0.65
LRTOMT-215ENST00000538478 UGGT1Q9NYU2 1555 aa11.01□□□□□ -0.65
LRTOMT-215ENST00000538478 PZPP20742 1482 aa11□□□□□ -0.65
LRTOMT-215ENST00000538478 MIA2Q96PC5 1412 aa11□□□□□ -0.65
LRTOMT-215ENST00000538478 LRP6O75581 1613 aa10.99□□□□□ -0.65
LRTOMT-215ENST00000538478 ADGBQ8N7X0 1667 aa10.99□□□□□ -0.65
LRTOMT-215ENST00000538478 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
LRTOMT-215ENST00000538478 FAM135AQ9P2D6 1515 aa10.99□□□□□ -0.65
LRTOMT-215ENST00000538478 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
LRTOMT-215ENST00000538478 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
LRTOMT-215ENST00000538478 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
LRTOMT-215ENST00000538478 PHLPP1O60346 1717 aa10.96□□□□□ -0.65
LRTOMT-215ENST00000538478 ARHGAP35Q9NRY4 1499 aa10.96□□□□□ -0.65
LRTOMT-215ENST00000538478 GPATCH8Q9UKJ3 1502 aaKnown RBP10.95□□□□□ -0.66
LRTOMT-215ENST00000538478 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
LRTOMT-215ENST00000538478 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
LRTOMT-215ENST00000538478 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
LRTOMT-215ENST00000538478 JCADQ9P266 1359 aa10.94□□□□□ -0.66
LRTOMT-215ENST00000538478 LTKP29376 864 aa10.94□□□□□ -0.66
LRTOMT-215ENST00000538478 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
LRTOMT-215ENST00000538478 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
LRTOMT-215ENST00000538478 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
LRTOMT-215ENST00000538478 TMEM94Q12767 1356 aa10.93□□□□□ -0.66
LRTOMT-215ENST00000538478 COL16A1Q07092 1604 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-215ENST00000538478 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
LRTOMT-215ENST00000538478 KIAA1107Q9UPP5 1409 aa10.92□□□□□ -0.66
LRTOMT-215ENST00000538478 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
LRTOMT-215ENST00000538478 RXRBP28702 533 aa10.92□□□□□ -0.66
LRTOMT-215ENST00000538478 ZNF772Q68DY9 489 aaPredicted RBP10.91□□□□□ -0.66
LRTOMT-215ENST00000538478 NCOA2Q15596 1464 aa10.91□□□□□ -0.66
LRTOMT-215ENST00000538478 CDK12Q9NYV4 1490 aaPredicted RBP10.91□□□□□ -0.66
LRTOMT-215ENST00000538478 DHX29Q7Z478 1369 aaKnown RBP10.9□□□□□ -0.66
LRTOMT-215ENST00000538478 SCAF11Q99590 1463 aaKnown RBP10.9□□□□□ -0.66
LRTOMT-215ENST00000538478 KIF3BO15066 747 aa10.9□□□□□ -0.66
LRTOMT-215ENST00000538478 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-215ENST00000538478 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
LRTOMT-215ENST00000538478 WASHC2CQ9Y4E1 1318 aa10.88□□□□□ -0.67
LRTOMT-215ENST00000538478 ARHGAP23Q9P227 1491 aa10.88□□□□□ -0.67
LRTOMT-215ENST00000538478 EP400Q96L91 3159 aa10.87□□□□□ -0.67
LRTOMT-215ENST00000538478 MBD5Q9P267 1494 aa10.87□□□□□ -0.67
LRTOMT-215ENST00000538478 RGS12O14924 1447 aa10.87□□□□□ -0.67
LRTOMT-215ENST00000538478 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
LRTOMT-215ENST00000538478 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
LRTOMT-215ENST00000538478 SLIT1O75093 1534 aa10.86□□□□□ -0.67
LRTOMT-215ENST00000538478 MEX3CQ5U5Q3 659 aaKnown RBP10.86□□□□□ -0.67
LRTOMT-215ENST00000538478 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
LRTOMT-215ENST00000538478 SLAIN2Q9P270 581 aa10.86□□□□□ -0.67
LRTOMT-215ENST00000538478 PLEKHH2Q8IVE3 1493 aa10.86□□□□□ -0.67
LRTOMT-215ENST00000538478 SHPRHQ149N8 1683 aa10.85□□□□□ -0.67
LRTOMT-215ENST00000538478 SPATA31A6Q5VVP1 1343 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms