RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 EVI5O60447 810 aa15.15■□□□□ 0.02
CD9-207ENST00000538418 SSTR3P32745 418 aaPredicted RBP15.15■□□□□ 0.02
CD9-207ENST00000538418 G3V3G9 751 aa15.14■□□□□ 0.01
CD9-207ENST00000538418 MDM2Q00987 491 aaPredicted RBP15.14■□□□□ 0.01
CD9-207ENST00000538418 ATP1B4Q9UN42 357 aaPredicted RBP15.14■□□□□ 0.01
CD9-207ENST00000538418 PROCA1Q8NCQ7 364 aaPredicted RBP15.13■□□□□ 0.01
CD9-207ENST00000538418 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
CD9-207ENST00000538418 NPDC1Q9NQX5 325 aaPredicted RBP15.1■□□□□ 0.01
CD9-207ENST00000538418 SPDYE5A6NIY4 337 aa15.09■□□□□ 0.01
CD9-207ENST00000538418 PHOX2BQ99453 314 aa15.08■□□□□ 0
CD9-207ENST00000538418 POLR3EQ9NVU0 708 aa15.08■□□□□ 0
CD9-207ENST00000538418 IRX5P78411 483 aaPredicted RBP15.07■□□□□ 0
CD9-207ENST00000538418 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.07■□□□□ 0
CD9-207ENST00000538418 OCEL1Q9H607 264 aa15.07■□□□□ 0
CD9-207ENST00000538418 CDHR5Q9HBB8 845 aa15.07■□□□□ 0
CD9-207ENST00000538418 PLSCR2Q9NRY7 297 aa15.07■□□□□ 0
CD9-207ENST00000538418 COG6Q9Y2V7 657 aa15.07■□□□□ 0
CD9-207ENST00000538418 AEBP1Q8IUX7 1158 aa15.06■□□□□ 0
CD9-207ENST00000538418 EN1Q05925 392 aaPredicted RBP15.04■□□□□ -0
CD9-207ENST00000538418 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
CD9-207ENST00000538418 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
CD9-207ENST00000538418 ABCC9O60706 1549 aa15.02■□□□□ -0
CD9-207ENST00000538418 MYSM1Q5VVJ2 828 aa15.02■□□□□ -0
CD9-207ENST00000538418 TMEM92Q6UXU6 159 aa15.02■□□□□ -0
CD9-207ENST00000538418 BANK1Q8NDB2 785 aa15.02■□□□□ -0
CD9-207ENST00000538418 RETREG2Q8NC44 543 aa15□□□□□ -0.01
CD9-207ENST00000538418 EPAS1Q99814 870 aa15□□□□□ -0.01
CD9-207ENST00000538418 ZNF330Q9Y3S2 320 aaPredicted RBP15□□□□□ -0.01
CD9-207ENST00000538418 MAP3K7O43318 606 aa14.99□□□□□ -0.01
CD9-207ENST00000538418 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
CD9-207ENST00000538418 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
CD9-207ENST00000538418 PHF14O94880 888 aa14.98□□□□□ -0.01
CD9-207ENST00000538418 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
CD9-207ENST00000538418 SNRKQ9NRH2 765 aa14.98□□□□□ -0.01
CD9-207ENST00000538418 PTCD2Q8WV60 388 aaKnown RBP14.97□□□□□ -0.01
CD9-207ENST00000538418 CCDC180Q9P1Z9 1646 aa14.96□□□□□ -0.01
CD9-207ENST00000538418 RFC5P40937 340 aa14.96□□□□□ -0.01
CD9-207ENST00000538418 IER5LQ5T953 404 aa14.96□□□□□ -0.01
CD9-207ENST00000538418 L3MBTL3Q96JM7 780 aaPredicted RBP14.96□□□□□ -0.01
CD9-207ENST00000538418 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
CD9-207ENST00000538418 METTL3Q86U44 580 aaKnown RBP14.94□□□□□ -0.02
CD9-207ENST00000538418 OATP04181 439 aa14.93□□□□□ -0.02
CD9-207ENST00000538418 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
CD9-207ENST00000538418 TSR1Q2NL82 804 aaKnown RBP14.91□□□□□ -0.02
CD9-207ENST00000538418 TMEM259Q4ZIN3 620 aa14.91□□□□□ -0.02
CD9-207ENST00000538418 PLCG2P16885 1265 aa14.9□□□□□ -0.02
CD9-207ENST00000538418 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
CD9-207ENST00000538418 NLRP7Q8WX94 980 aa14.9□□□□□ -0.02
CD9-207ENST00000538418 TBC1D2Q9BYX2 928 aa14.9□□□□□ -0.02
CD9-207ENST00000538418 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
CD9-207ENST00000538418 IRF5Q13568 498 aa14.89□□□□□ -0.03
CD9-207ENST00000538418 DIXDC1Q155Q3 683 aa14.89□□□□□ -0.03
CD9-207ENST00000538418 TMCO4Q5TGY1 634 aa14.89□□□□□ -0.03
CD9-207ENST00000538418 RGS22Q8NE09 1264 aa14.88□□□□□ -0.03
CD9-207ENST00000538418 SLAIN1Q8ND83 568 aa14.87□□□□□ -0.03
CD9-207ENST00000538418 PXYLP1Q8TE99 480 aa14.87□□□□□ -0.03
CD9-207ENST00000538418 PCDHGA10Q9Y5H3 936 aa14.87□□□□□ -0.03
CD9-207ENST00000538418 FBXO31Q5XUX0 539 aaPredicted RBP14.86□□□□□ -0.03
CD9-207ENST00000538418 PPP2R2DQ66LE6 453 aa14.86□□□□□ -0.03
CD9-207ENST00000538418 WWC1Q8IX03 1113 aa14.86□□□□□ -0.03
CD9-207ENST00000538418 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
CD9-207ENST00000538418 ATMINO43313 823 aaPredicted RBP14.85□□□□□ -0.03
CD9-207ENST00000538418 GDPD2Q9HCC8 539 aa14.85□□□□□ -0.03
CD9-207ENST00000538418 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
CD9-207ENST00000538418 SLC34A2O95436 690 aa14.83□□□□□ -0.04
CD9-207ENST00000538418 MTMR14Q8NCE2 650 aa14.83□□□□□ -0.04
CD9-207ENST00000538418 CALR3Q96L12 384 aaKnown RBP14.83□□□□□ -0.04
CD9-207ENST00000538418 ADGRG1Q9Y653 693 aa14.83□□□□□ -0.04
CD9-207ENST00000538418 ACIN1Q9UKV3 1341 aaKnown RBP14.83□□□□□ -0.04
CD9-207ENST00000538418 PDE4CQ08493 712 aa14.82□□□□□ -0.04
CD9-207ENST00000538418 LIMD1Q9UGP4 676 aa14.82□□□□□ -0.04
CD9-207ENST00000538418 ASTLQ6HA08 431 aaPredicted RBP14.81□□□□□ -0.04
CD9-207ENST00000538418 MTMR7Q9Y216 660 aa14.81□□□□□ -0.04
CD9-207ENST00000538418 MFAP1P55081 439 aaKnown RBP14.8□□□□□ -0.04
CD9-207ENST00000538418 PADI6Q6TGC4 694 aa14.8□□□□□ -0.04
CD9-207ENST00000538418 CERKQ8TCT0 537 aa14.8□□□□□ -0.04
CD9-207ENST00000538418 CLCN6P51797 869 aa14.79□□□□□ -0.04
CD9-207ENST00000538418 FBXW7Q969H0 707 aa14.79□□□□□ -0.04
CD9-207ENST00000538418 RIC3Q7Z5B4 369 aa14.78□□□□□ -0.04
CD9-207ENST00000538418 PRM3Q9NNZ6 103 aa14.78□□□□□ -0.04
CD9-207ENST00000538418 SOCS7O14512 581 aa14.77□□□□□ -0.05
CD9-207ENST00000538418 ABL2P42684 1182 aa14.77□□□□□ -0.05
CD9-207ENST00000538418 TUSC1Q2TAM9 212 aa14.76□□□□□ -0.05
CD9-207ENST00000538418 GLMNQ92990 594 aa14.76□□□□□ -0.05
CD9-207ENST00000538418 SPIRE2Q8WWL2 714 aa14.74□□□□□ -0.05
CD9-207ENST00000538418 POM121CA8CG34 1229 aa14.73□□□□□ -0.05
CD9-207ENST00000538418 TTC13Q8NBP0 860 aa14.73□□□□□ -0.05
CD9-207ENST00000538418 JPH4Q96JJ6 628 aa14.73□□□□□ -0.05
CD9-207ENST00000538418 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
CD9-207ENST00000538418 PATL2C9JE40 543 aaKnown RBP14.72□□□□□ -0.05
CD9-207ENST00000538418 SPTLC1O15269 473 aa14.71□□□□□ -0.05
CD9-207ENST00000538418 C6orf132Q5T0Z8 1188 aa14.7□□□□□ -0.06
CD9-207ENST00000538418 TBC1D2BQ9UPU7 963 aa14.7□□□□□ -0.06
CD9-207ENST00000538418 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
CD9-207ENST00000538418 SEC24BO95487 1268 aa14.67□□□□□ -0.06
CD9-207ENST00000538418 FOXD4L5Q5VV16 416 aaPredicted RBP14.67□□□□□ -0.06
CD9-207ENST00000538418 RSBN1LQ6PCB5 846 aaPredicted RBP14.67□□□□□ -0.06
CD9-207ENST00000538418 FOXD4L4Q8WXT5 416 aaPredicted RBP14.67□□□□□ -0.06
CD9-207ENST00000538418 PBXIP1Q96AQ6 731 aa14.66□□□□□ -0.06
CD9-207ENST00000538418 CD46P15529 392 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms