RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 NCOA1Q15788 1441 aa20.05■□□□□ 0.8
COPS7A-207ENST00000538375 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
COPS7A-207ENST00000538375 DUOX2Q9NRD8 1548 aa20.05■□□□□ 0.8
COPS7A-207ENST00000538375 ZMYM3Q14202 1370 aa20.04■□□□□ 0.8
COPS7A-207ENST00000538375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.04■□□□□ 0.8
COPS7A-207ENST00000538375 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
COPS7A-207ENST00000538375 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
COPS7A-207ENST00000538375 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
COPS7A-207ENST00000538375 CERKQ8TCT0 537 aa19.99■□□□□ 0.79
COPS7A-207ENST00000538375 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
COPS7A-207ENST00000538375 ERBINQ96RT1 1412 aa19.98■□□□□ 0.79
COPS7A-207ENST00000538375 C3P01024 1663 aa19.96■□□□□ 0.79
COPS7A-207ENST00000538375 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
COPS7A-207ENST00000538375 ANKRD50Q9ULJ7 1429 aa19.95■□□□□ 0.78
COPS7A-207ENST00000538375 ROCK1Q13464 1354 aa19.95■□□□□ 0.78
COPS7A-207ENST00000538375 KANK1Q14678 1352 aa19.95■□□□□ 0.78
COPS7A-207ENST00000538375 FBXO31Q5XUX0 539 aaPredicted RBP19.93■□□□□ 0.78
COPS7A-207ENST00000538375 PREX1Q8TCU6 1659 aa19.93■□□□□ 0.78
COPS7A-207ENST00000538375 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
COPS7A-207ENST00000538375 MROH2AA6NES4 1674 aa19.92■□□□□ 0.78
COPS7A-207ENST00000538375 UHRF1BP1Q6BDS2 1440 aa19.91■□□□□ 0.78
COPS7A-207ENST00000538375 RNF17Q9BXT8 1623 aaKnown RBP19.91■□□□□ 0.78
COPS7A-207ENST00000538375 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
COPS7A-207ENST00000538375 ABCC3O15438 1527 aa19.87■□□□□ 0.77
COPS7A-207ENST00000538375 NPATQ14207 1427 aa19.87■□□□□ 0.77
COPS7A-207ENST00000538375 FAM135AQ9P2D6 1515 aa19.86■□□□□ 0.77
COPS7A-207ENST00000538375 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
COPS7A-207ENST00000538375 MROH1Q8NDA8 1641 aa19.86■□□□□ 0.77
COPS7A-207ENST00000538375 SETD1BQ9UPS6 1966 aaKnown RBP19.86■□□□□ 0.77
COPS7A-207ENST00000538375 PTPRTO14522 1441 aa19.84■□□□□ 0.77
COPS7A-207ENST00000538375 CEP152O94986 1710 aa19.83■□□□□ 0.77
COPS7A-207ENST00000538375 PZPP20742 1482 aa19.83■□□□□ 0.76
COPS7A-207ENST00000538375 TNRQ92752 1358 aa19.83■□□□□ 0.76
COPS7A-207ENST00000538375 PRDM15P57071 1507 aaPredicted RBP19.82■□□□□ 0.76
COPS7A-207ENST00000538375 ZC3H13Q5T200 1668 aaKnown RBP19.82■□□□□ 0.76
COPS7A-207ENST00000538375 DEPDC5O75140 1603 aa19.81■□□□□ 0.76
COPS7A-207ENST00000538375 NUP155O75694 1391 aa19.81■□□□□ 0.76
COPS7A-207ENST00000538375 TRIM52Q96A61 297 aa19.8■□□□□ 0.76
COPS7A-207ENST00000538375 NAIPQ13075 1403 aa19.79■□□□□ 0.76
COPS7A-207ENST00000538375 CAMSAP1Q5T5Y3 1602 aa19.79■□□□□ 0.76
COPS7A-207ENST00000538375 CFAP65Q6ZU64 1925 aaKnown RBP19.76■□□□□ 0.75
COPS7A-207ENST00000538375 HFM1A2PYH4 1435 aa19.75■□□□□ 0.75
COPS7A-207ENST00000538375 ARHGAP31Q2M1Z3 1444 aa19.75■□□□□ 0.75
COPS7A-207ENST00000538375 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
COPS7A-207ENST00000538375 ERVK-7P63135 1459 aa19.74■□□□□ 0.75
COPS7A-207ENST00000538375 LMTK2Q8IWU2 1503 aa19.73■□□□□ 0.75
COPS7A-207ENST00000538375 UNC13BO14795 1591 aa19.73■□□□□ 0.75
COPS7A-207ENST00000538375 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
COPS7A-207ENST00000538375 MYO3AQ8NEV4 1616 aa19.73■□□□□ 0.75
COPS7A-207ENST00000538375 THEMISQ8N1K5 641 aaPredicted RBP19.72■□□□□ 0.75
COPS7A-207ENST00000538375 STAG3Q9UJ98 1225 aa19.72■□□□□ 0.75
COPS7A-207ENST00000538375 A2ML1A8K2U0 1454 aa19.71■□□□□ 0.75
COPS7A-207ENST00000538375 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
COPS7A-207ENST00000538375 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
COPS7A-207ENST00000538375 NCKAP5LQ9HCH0 1330 aa19.7■□□□□ 0.74
COPS7A-207ENST00000538375 GCC2Q8IWJ2 1684 aa19.69■□□□□ 0.74
COPS7A-207ENST00000538375 NLRP1Q9C000 1473 aa19.69■□□□□ 0.74
COPS7A-207ENST00000538375 EFCAB6Q5THR3 1501 aa19.68■□□□□ 0.74
COPS7A-207ENST00000538375 IDI1Q13907 227 aa19.67■□□□□ 0.74
COPS7A-207ENST00000538375 TET3O43151 1660 aa19.66■□□□□ 0.74
COPS7A-207ENST00000538375 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
COPS7A-207ENST00000538375 SETD5Q9C0A6 1442 aa19.66■□□□□ 0.74
COPS7A-207ENST00000538375 IQSEC2Q5JU85 1478 aa19.66■□□□□ 0.74
COPS7A-207ENST00000538375 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
COPS7A-207ENST00000538375 IQGAP3Q86VI3 1631 aa19.65■□□□□ 0.74
COPS7A-207ENST00000538375 CHGAP10645 457 aaKnown RBP19.65■□□□□ 0.74
COPS7A-207ENST00000538375 RPRD2Q5VT52 1461 aaKnown RBP19.65■□□□□ 0.74
COPS7A-207ENST00000538375 PKD2Q13563 968 aa19.64■□□□□ 0.73
COPS7A-207ENST00000538375 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
COPS7A-207ENST00000538375 SLC52A1Q9NWF4 448 aa19.64■□□□□ 0.73
COPS7A-207ENST00000538375 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
COPS7A-207ENST00000538375 PLA2R1Q13018 1463 aa19.62■□□□□ 0.73
COPS7A-207ENST00000538375 NOS1P29475 1434 aa19.62■□□□□ 0.73
COPS7A-207ENST00000538375 E9PCH4 1651 aa19.6■□□□□ 0.73
COPS7A-207ENST00000538375 ZNF335Q9H4Z2 1342 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-207ENST00000538375 ILDR2Q71H61 639 aa19.59■□□□□ 0.73
COPS7A-207ENST00000538375 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
COPS7A-207ENST00000538375 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
COPS7A-207ENST00000538375 SYNMO15061 1565 aa19.58■□□□□ 0.73
COPS7A-207ENST00000538375 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.73
COPS7A-207ENST00000538375 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
COPS7A-207ENST00000538375 FOXD1Q16676 465 aa19.57■□□□□ 0.72
COPS7A-207ENST00000538375 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
COPS7A-207ENST00000538375 PIK3C2BO00750 1634 aa19.57■□□□□ 0.72
COPS7A-207ENST00000538375 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
COPS7A-207ENST00000538375 UBR1Q8IWV7 1749 aa19.54■□□□□ 0.72
COPS7A-207ENST00000538375 BCANQ96GW7 911 aa19.53■□□□□ 0.72
COPS7A-207ENST00000538375 LTKP29376 864 aa19.52■□□□□ 0.72
COPS7A-207ENST00000538375 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
COPS7A-207ENST00000538375 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
COPS7A-207ENST00000538375 TMEM2Q9UHN6 1383 aa19.51■□□□□ 0.71
COPS7A-207ENST00000538375 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
COPS7A-207ENST00000538375 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
COPS7A-207ENST00000538375 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
COPS7A-207ENST00000538375 NPHP4O75161 1426 aaPredicted RBP19.49■□□□□ 0.71
COPS7A-207ENST00000538375 ADGRB3O60242 1522 aa19.48■□□□□ 0.71
COPS7A-207ENST00000538375 HRCP23327 699 aa19.48■□□□□ 0.71
COPS7A-207ENST00000538375 NUTM2DQ5VT03 806 aaPredicted RBP19.48■□□□□ 0.71
COPS7A-207ENST00000538375 UBAP1LF5GYI3 381 aa19.47■□□□□ 0.71
COPS7A-207ENST00000538375 SOCS7O14512 581 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms