RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
LIMK1-208ENST00000538333 PRKRIP1Q9H875 184 aaPredicted RBP19.46■□□□□ 0.71
LIMK1-208ENST00000538333 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
LIMK1-208ENST00000538333 ATP10AO60312 1499 aa19.44■□□□□ 0.7
LIMK1-208ENST00000538333 ZFYVE16Q7Z3T8 1539 aa19.44■□□□□ 0.7
LIMK1-208ENST00000538333 ARID4BQ4LE39 1312 aaPredicted RBP19.43■□□□□ 0.7
LIMK1-208ENST00000538333 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
LIMK1-208ENST00000538333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
LIMK1-208ENST00000538333 TRPM1Q7Z4N2 1603 aa19.42■□□□□ 0.7
LIMK1-208ENST00000538333 PRAG1Q86YV5 1406 aa19.41■□□□□ 0.7
LIMK1-208ENST00000538333 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
LIMK1-208ENST00000538333 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
LIMK1-208ENST00000538333 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.7
LIMK1-208ENST00000538333 A2MP01023 1474 aa19.39■□□□□ 0.69
LIMK1-208ENST00000538333 CCDC184Q52MB2 194 aa19.39■□□□□ 0.69
LIMK1-208ENST00000538333 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
LIMK1-208ENST00000538333 FANCAO15360 1455 aa19.39■□□□□ 0.69
LIMK1-208ENST00000538333 INO80Q9ULG1 1556 aaPredicted RBP19.39■□□□□ 0.69
LIMK1-208ENST00000538333 DEPDC5O75140 1603 aa19.38■□□□□ 0.69
LIMK1-208ENST00000538333 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
LIMK1-208ENST00000538333 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
LIMK1-208ENST00000538333 E9PCH4 1651 aa19.36■□□□□ 0.69
LIMK1-208ENST00000538333 ROCK2O75116 1388 aaKnown RBP19.35■□□□□ 0.69
LIMK1-208ENST00000538333 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
LIMK1-208ENST00000538333 LAMC1P11047 1609 aa19.34■□□□□ 0.69
LIMK1-208ENST00000538333 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.69
LIMK1-208ENST00000538333 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
LIMK1-208ENST00000538333 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
LIMK1-208ENST00000538333 ADGRL1O94910 1474 aa19.32■□□□□ 0.68
LIMK1-208ENST00000538333 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
LIMK1-208ENST00000538333 EIF2AK4Q9P2K8 1649 aaKnown RBP19.31■□□□□ 0.68
LIMK1-208ENST00000538333 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
LIMK1-208ENST00000538333 MRS2Q9HD23 443 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 TRPM2O94759 1503 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 PRDM15P57071 1507 aaPredicted RBP19.29■□□□□ 0.68
LIMK1-208ENST00000538333 TET3O43151 1660 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
LIMK1-208ENST00000538333 PTPRTO14522 1441 aa19.27■□□□□ 0.68
LIMK1-208ENST00000538333 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
LIMK1-208ENST00000538333 CEP152O94986 1710 aa19.26■□□□□ 0.67
LIMK1-208ENST00000538333 FKBP8Q14318 412 aa19.26■□□□□ 0.67
LIMK1-208ENST00000538333 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
LIMK1-208ENST00000538333 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
LIMK1-208ENST00000538333 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
LIMK1-208ENST00000538333 KIDINS220Q9ULH0 1771 aa19.25■□□□□ 0.67
LIMK1-208ENST00000538333 CLTCL1P53675 1640 aa19.23■□□□□ 0.67
LIMK1-208ENST00000538333 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
LIMK1-208ENST00000538333 MADDQ8WXG6 1647 aa19.22■□□□□ 0.67
LIMK1-208ENST00000538333 COL17A1Q9UMD9 1497 aaPredicted RBP19.2■□□□□ 0.66
LIMK1-208ENST00000538333 NEFLP07196 543 aa19.2■□□□□ 0.66
LIMK1-208ENST00000538333 ZNF518AQ6AHZ1 1483 aa19.19■□□□□ 0.66
LIMK1-208ENST00000538333 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
LIMK1-208ENST00000538333 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
LIMK1-208ENST00000538333 KANK1Q14678 1352 aa19.19■□□□□ 0.66
LIMK1-208ENST00000538333 DNAJC5Q9H3Z4 198 aa19.19■□□□□ 0.66
LIMK1-208ENST00000538333 ZBED9Q6R2W3 1325 aa19.18■□□□□ 0.66
LIMK1-208ENST00000538333 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
LIMK1-208ENST00000538333 TESK2Q96S53 571 aa19.18■□□□□ 0.66
LIMK1-208ENST00000538333 NEURL4Q96JN8 1562 aa19.18■□□□□ 0.66
LIMK1-208ENST00000538333 KIF3BO15066 747 aa19.17■□□□□ 0.66
LIMK1-208ENST00000538333 KTN1Q86UP2 1357 aaKnown RBP19.16■□□□□ 0.66
LIMK1-208ENST00000538333 IQGAP1P46940 1657 aa19.15■□□□□ 0.66
LIMK1-208ENST00000538333 BCANQ96GW7 911 aa19.15■□□□□ 0.66
LIMK1-208ENST00000538333 CD109Q6YHK3 1445 aa19.15■□□□□ 0.66
LIMK1-208ENST00000538333 EFCAB6Q5THR3 1501 aa19.14■□□□□ 0.66
LIMK1-208ENST00000538333 DISP3Q9P2K9 1392 aa19.14■□□□□ 0.65
LIMK1-208ENST00000538333 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.65
LIMK1-208ENST00000538333 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
LIMK1-208ENST00000538333 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
LIMK1-208ENST00000538333 MYT1LQ9UL68 1186 aa19.13■□□□□ 0.65
LIMK1-208ENST00000538333 PPRC1Q5VV67 1664 aaKnown RBP19.12■□□□□ 0.65
LIMK1-208ENST00000538333 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
LIMK1-208ENST00000538333 MLH3Q9UHC1 1453 aa19.11■□□□□ 0.65
LIMK1-208ENST00000538333 FRMPD1Q5SYB0 1578 aa19.11■□□□□ 0.65
LIMK1-208ENST00000538333 RALBP1Q15311 655 aa19.1■□□□□ 0.65
LIMK1-208ENST00000538333 KIAA1210Q9ULL0 1709 aa19.1■□□□□ 0.65
LIMK1-208ENST00000538333 HECW2Q9P2P5 1572 aa19.1■□□□□ 0.65
LIMK1-208ENST00000538333 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
LIMK1-208ENST00000538333 PNISRQ8TF01 805 aaKnown RBP19.09■□□□□ 0.65
LIMK1-208ENST00000538333 MYBBP1AQ9BQG0 1328 aaKnown RBP19.09■□□□□ 0.65
LIMK1-208ENST00000538333 BRD4O60885 1362 aaPredicted RBP19.08■□□□□ 0.65
LIMK1-208ENST00000538333 UGGT1Q9NYU2 1555 aa19.08■□□□□ 0.65
LIMK1-208ENST00000538333 KIF1BO60333 1816 aa19.08■□□□□ 0.65
LIMK1-208ENST00000538333 PARD3Q8TEW0 1356 aa19.08■□□□□ 0.64
LIMK1-208ENST00000538333 IFT172Q9UG01 1749 aa19.07■□□□□ 0.64
LIMK1-208ENST00000538333 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
LIMK1-208ENST00000538333 TMF1P82094 1093 aa19.06■□□□□ 0.64
LIMK1-208ENST00000538333 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
LIMK1-208ENST00000538333 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
LIMK1-208ENST00000538333 ABCA6Q8N139 1617 aa19.05■□□□□ 0.64
LIMK1-208ENST00000538333 MAP3K4Q9Y6R4 1608 aa19.05■□□□□ 0.64
LIMK1-208ENST00000538333 MYOM2P54296 1465 aa19.05■□□□□ 0.64
LIMK1-208ENST00000538333 NEO1Q92859 1461 aa19.05■□□□□ 0.64
LIMK1-208ENST00000538333 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
LIMK1-208ENST00000538333 WASHC2CQ9Y4E1 1318 aa19.03■□□□□ 0.64
LIMK1-208ENST00000538333 TSHZ2Q9NRE2 1034 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms