RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 FOXD4L4Q8WXT5 416 aaPredicted RBP14.09□□□□□ -0.15
LINC00346-201ENST00000538077 SLKQ9H2G2 1235 aaPredicted RBP14.08□□□□□ -0.16
LINC00346-201ENST00000538077 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
LINC00346-201ENST00000538077 RAD21O60216 631 aa14.07□□□□□ -0.16
LINC00346-201ENST00000538077 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
LINC00346-201ENST00000538077 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
LINC00346-201ENST00000538077 RASSF8Q8NHQ8 419 aa14.07□□□□□ -0.16
LINC00346-201ENST00000538077 NECTIN2Q92692 538 aa14.06□□□□□ -0.16
LINC00346-201ENST00000538077 FBXW7Q969H0 707 aa14.06□□□□□ -0.16
LINC00346-201ENST00000538077 MSNP26038 577 aaKnown RBP14.06□□□□□ -0.16
LINC00346-201ENST00000538077 RWDD1Q9H446 243 aaPredicted RBP14.06□□□□□ -0.16
LINC00346-201ENST00000538077 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
LINC00346-201ENST00000538077 CHAF1AQ13111 956 aaPredicted RBP14.05□□□□□ -0.16
LINC00346-201ENST00000538077 NOC3LQ8WTT2 800 aaKnown RBP14.04□□□□□ -0.16
LINC00346-201ENST00000538077 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
LINC00346-201ENST00000538077 RALBP1Q15311 655 aa14.03□□□□□ -0.16
LINC00346-201ENST00000538077 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
LINC00346-201ENST00000538077 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.16
LINC00346-201ENST00000538077 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.16
LINC00346-201ENST00000538077 FMN1Q68DA7 1419 aa14.02□□□□□ -0.17
LINC00346-201ENST00000538077 BCL2L13Q9BXK5 485 aa14.02□□□□□ -0.17
LINC00346-201ENST00000538077 EIF2S2P20042 333 aaKnown RBP14.01□□□□□ -0.17
LINC00346-201ENST00000538077 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
LINC00346-201ENST00000538077 MARCH6O60337 910 aa14□□□□□ -0.17
LINC00346-201ENST00000538077 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
LINC00346-201ENST00000538077 RILPL2Q969X0 211 aa14□□□□□ -0.17
LINC00346-201ENST00000538077 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
LINC00346-201ENST00000538077 CCER2I3L3R5 266 aa13.98□□□□□ -0.17
LINC00346-201ENST00000538077 PMFBP1Q8TBY8 1022 aa13.98□□□□□ -0.17
LINC00346-201ENST00000538077 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
LINC00346-201ENST00000538077 COG3Q96JB2 828 aa13.98□□□□□ -0.17
LINC00346-201ENST00000538077 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
LINC00346-201ENST00000538077 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
LINC00346-201ENST00000538077 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
LINC00346-201ENST00000538077 PANK3Q9H999 370 aa13.97□□□□□ -0.17
LINC00346-201ENST00000538077 FOXD4L6Q3SYB3 417 aaPredicted RBP13.97□□□□□ -0.17
LINC00346-201ENST00000538077 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
LINC00346-201ENST00000538077 FOXD4L3Q6VB84 417 aaPredicted RBP13.97□□□□□ -0.17
LINC00346-201ENST00000538077 HMMRO75330 724 aa13.97□□□□□ -0.17
LINC00346-201ENST00000538077 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
LINC00346-201ENST00000538077 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
LINC00346-201ENST00000538077 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
LINC00346-201ENST00000538077 PSME1Q06323 249 aa13.95□□□□□ -0.18
LINC00346-201ENST00000538077 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
LINC00346-201ENST00000538077 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
LINC00346-201ENST00000538077 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
LINC00346-201ENST00000538077 PLIN1O60240 522 aa13.94□□□□□ -0.18
LINC00346-201ENST00000538077 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
LINC00346-201ENST00000538077 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
LINC00346-201ENST00000538077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.94□□□□□ -0.18
LINC00346-201ENST00000538077 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
LINC00346-201ENST00000538077 PES1O00541 588 aaKnown RBP13.93□□□□□ -0.18
LINC00346-201ENST00000538077 LMOD3Q0VAK6 560 aa13.93□□□□□ -0.18
LINC00346-201ENST00000538077 TRIM34Q9BYJ4 488 aa13.93□□□□□ -0.18
LINC00346-201ENST00000538077 TPM4P67936 248 aa13.93□□□□□ -0.18
LINC00346-201ENST00000538077 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
LINC00346-201ENST00000538077 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
LINC00346-201ENST00000538077 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
LINC00346-201ENST00000538077 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
LINC00346-201ENST00000538077 ST20-MTHFSA0A0A6YYL1 179 aa13.92□□□□□ -0.18
LINC00346-201ENST00000538077 FAM69CQ0P6D2 419 aa13.92□□□□□ -0.18
LINC00346-201ENST00000538077 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
LINC00346-201ENST00000538077 TEFQ10587 303 aa13.9□□□□□ -0.18
LINC00346-201ENST00000538077 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
LINC00346-201ENST00000538077 CTDP1Q9Y5B0 961 aaPredicted RBP13.9□□□□□ -0.18
LINC00346-201ENST00000538077 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
LINC00346-201ENST00000538077 H3BQV1 296 aa13.89□□□□□ -0.19
LINC00346-201ENST00000538077 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
LINC00346-201ENST00000538077 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
LINC00346-201ENST00000538077 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
LINC00346-201ENST00000538077 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
LINC00346-201ENST00000538077 VPS37DQ86XT2 251 aa13.88□□□□□ -0.19
LINC00346-201ENST00000538077 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
LINC00346-201ENST00000538077 FOSBP53539 338 aa13.87□□□□□ -0.19
LINC00346-201ENST00000538077 TCEAL9Q9UHQ7 104 aa13.87□□□□□ -0.19
LINC00346-201ENST00000538077 APPP05067 770 aa13.87□□□□□ -0.19
LINC00346-201ENST00000538077 OSCARQ8IYS5 282 aa13.87□□□□□ -0.19
LINC00346-201ENST00000538077 FYB1O15117 783 aa13.87□□□□□ -0.19
LINC00346-201ENST00000538077 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
LINC00346-201ENST00000538077 C9orf78Q9NZ63 289 aaPredicted RBP13.87□□□□□ -0.19
LINC00346-201ENST00000538077 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 PTPRGP23470 1445 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 SYAP1Q96A49 352 aaPredicted RBP13.86□□□□□ -0.19
LINC00346-201ENST00000538077 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 KIF15Q9NS87 1388 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
LINC00346-201ENST00000538077 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 MCTP1Q6DN14 999 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
LINC00346-201ENST00000538077 KDM4AO75164 1064 aa13.85□□□□□ -0.19
LINC00346-201ENST00000538077 TPD52L1Q16890 204 aaPredicted RBP13.85□□□□□ -0.19
LINC00346-201ENST00000538077 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
LINC00346-201ENST00000538077 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
LINC00346-201ENST00000538077 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
LINC00346-201ENST00000538077 HMOX1P09601 288 aa13.85□□□□□ -0.19
LINC00346-201ENST00000538077 AIMP1Q12904 312 aaKnown RBP13.85□□□□□ -0.19
LINC00346-201ENST00000538077 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
LINC00346-201ENST00000538077 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
LINC00346-201ENST00000538077 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
LINC00346-201ENST00000538077 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms