RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-210	ENST00000537842	GPIHBP1	Q8IV16	184 aa		4.66	□□□□□ -1.66
TNFRSF1A-210	ENST00000537842	CDHR5	Q9HBB8	845 aa		4.66	□□□□□ -1.66
TNFRSF1A-210	ENST00000537842	PCDHGA10	Q9Y5H3	936 aa		4.66	□□□□□ -1.66
TNFRSF1A-210	ENST00000537842	SMARCA4	P51532	1647 aa		4.65	□□□□□ -1.66
TNFRSF1A-210	ENST00000537842	PHF14	O94880	888 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	FOSB	P53539	338 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	LCE2D	Q5TA82	110 aa	Predicted RBP	4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	ZDHHC16	Q969W1	377 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	KCNH8	Q96L42	1107 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	HS3ST6	Q96QI5	342 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	ADAM33	Q9BZ11	813 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	AXIN2	Q9Y2T1	843 aa		4.65	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PRIM1	P49642	420 aa	Known RBP	4.64	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	EN1	Q05925	392 aa	Predicted RBP	4.64	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.63	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	OSBP	P22059	807 aa		4.63	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PSEN2	P49810	448 aa		4.63	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	FBXW7	Q969H0	707 aa		4.63	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	EPAS1	Q99814	870 aa		4.63	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	KDM4F	A0A1W2PPD8	638 aa		4.62	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PSD	A5PKW4	1024 aa	Predicted RBP	4.62	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	POTEM	A6NI47	508 aa		4.62	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PTPRE	P23469	700 aa		4.62	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	POTEG	Q6S5H5	508 aa		4.62	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.62	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PEG3	Q9GZU2	1588 aa		4.61	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PTGER2	P43116	358 aa		4.61	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	NES	P48681	1621 aa		4.61	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	WIZ	O95785	1651 aa		4.61	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	POTEB3	A0JP26	581 aa		4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	COL9A1	P20849	921 aa		4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	C6orf132	Q5T0Z8	1188 aa		4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	POTEB	Q6S5H4	581 aa		4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	ERICH6	Q7L0X2	663 aa		4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	SMARCA2	P51531	1590 aa		4.6	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	FCHSD2	O94868	740 aa		4.59	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	FAM161A	Q3B820	660 aa		4.59	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	PROX2	Q3B8N5	592 aa		4.59	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	ANKRD13D	Q6ZTN6	518 aa		4.59	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	KRI1	Q8N9T8	703 aa	Known RBP	4.59	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	BCL2L12	Q9HB09	334 aa		4.59	□□□□□ -1.67
TNFRSF1A-210	ENST00000537842	HMGXB3	Q12766	1538 aa		4.58	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	PPP1R3G	B7ZBB8	358 aa		4.58	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	DMRTA1	Q5VZB9	504 aa		4.58	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	PADI6	Q6TGC4	694 aa		4.58	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	ZC3H15	Q8WU90	426 aa	Known RBP	4.58	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	ARHGAP33	O14559	1287 aa		4.57	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	FECH	P22830	423 aa		4.57	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	PTGDR	Q13258	359 aa		4.57	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	ZNF687	Q8N1G0	1237 aa		4.57	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.57	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	SMAP	O00193	183 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	SUPT5H	O00267	1087 aa	Known RBP	4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	GNPAT	O15228	680 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	GPR37	O15354	613 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	RNF40	O75150	1001 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	LSM11	P83369	360 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	POTEE	Q6S8J3	1075 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	CDAN1	Q8IWY9	1227 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	NLRP7	Q8WX94	980 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	CDCA7L	Q96GN5	454 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	STAC3	Q96MF2	364 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	CCDC88B	A6NC98	1476 aa		4.56	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	CADPS	Q9ULU8	1353 aa		4.55	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	PBX2	P40425	430 aa		4.55	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	HIC1	Q14526	733 aa		4.55	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	SLC24A3	Q9HC58	644 aa		4.55	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	PNMA3	Q9UL41	463 aa		4.55	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	NBPF26	B4DH59	902 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	PRSS12	P56730	875 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	CERK	Q8TCT0	537 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	CCDC102A	Q96A19	550 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	ZBED2	Q9BTP6	218 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	KIAA1468	Q9P260	1216 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	TSKS	Q9UJT2	592 aa		4.54	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	GOLGA8CP	A6NN73	597 aa		4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	TRIM6-TRIM34	B2RNG4	842 aa		4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	TTLL12	Q14166	644 aa	Predicted RBP	4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	ADGRD1	Q6QNK2	874 aa		4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	NUDT18	Q6ZVK8	323 aa		4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	FAM198A	Q9UFP1	575 aa		4.53	□□□□□ -1.68
TNFRSF1A-210	ENST00000537842	TOP2A	P11388	1531 aa	Known RBP	4.52	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	MAP2K5	Q13163	448 aa		4.52	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	PACS2	Q86VP3	889 aa		4.52	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	KRTAP3-3	Q9BYR6	98 aa		4.52	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	KRTAP3-2	Q9BYR7	98 aa		4.52	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	NBPF3	Q9H094	633 aa		4.52	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	CFTR	P13569	1480 aa		4.51	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	C3orf80	F5H4A9	247 aa		4.51	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	ZMYND10	O75800	440 aa		4.51	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	MRPL50	Q8N5N7	158 aa	Known RBP	4.51	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	VPS9D1	Q9Y2B5	631 aa		4.51	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	MDM2	Q00987	491 aa	Predicted RBP	4.5	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	BARGIN	Q6ZT62	677 aa		4.5	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	RBM46	Q8TBY0	533 aa	Known RBP	4.5	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	TATDN2	Q93075	761 aa		4.5	□□□□□ -1.69
TNFRSF1A-210	ENST00000537842	RBM27	Q9P2N5	1060 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms