RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
GGA3-201ENST00000537686 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
GGA3-201ENST00000537686 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
GGA3-201ENST00000537686 MS4A1P11836 297 aa12.98□□□□□ -0.33
GGA3-201ENST00000537686 NAIPQ13075 1403 aa12.97□□□□□ -0.33
GGA3-201ENST00000537686 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
GGA3-201ENST00000537686 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
GGA3-201ENST00000537686 DAPK1P53355 1430 aa12.97□□□□□ -0.33
GGA3-201ENST00000537686 ATP10BO94823 1461 aa12.97□□□□□ -0.33
GGA3-201ENST00000537686 NUTM2DQ5VT03 806 aaPredicted RBP12.96□□□□□ -0.33
GGA3-201ENST00000537686 RALBP1Q15311 655 aa12.96□□□□□ -0.34
GGA3-201ENST00000537686 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
GGA3-201ENST00000537686 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
GGA3-201ENST00000537686 FAM69CQ0P6D2 419 aa12.95□□□□□ -0.34
GGA3-201ENST00000537686 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
GGA3-201ENST00000537686 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
GGA3-201ENST00000537686 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
GGA3-201ENST00000537686 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
GGA3-201ENST00000537686 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
GGA3-201ENST00000537686 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
GGA3-201ENST00000537686 GOLGA6L22H0YM25 854 aa12.93□□□□□ -0.34
GGA3-201ENST00000537686 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
GGA3-201ENST00000537686 ABCC5O15440 1437 aa12.93□□□□□ -0.34
GGA3-201ENST00000537686 PTPRKQ15262 1439 aa12.93□□□□□ -0.34
GGA3-201ENST00000537686 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
GGA3-201ENST00000537686 RCAN3Q9UKA8 241 aa12.92□□□□□ -0.34
GGA3-201ENST00000537686 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
GGA3-201ENST00000537686 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
GGA3-201ENST00000537686 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
GGA3-201ENST00000537686 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
GGA3-201ENST00000537686 NCLP19338 710 aaKnown RBP12.9□□□□□ -0.34
GGA3-201ENST00000537686 GPATCH8Q9UKJ3 1502 aaKnown RBP12.9□□□□□ -0.34
GGA3-201ENST00000537686 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
GGA3-201ENST00000537686 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
GGA3-201ENST00000537686 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
GGA3-201ENST00000537686 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
GGA3-201ENST00000537686 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
GGA3-201ENST00000537686 KIF14Q15058 1648 aa12.87□□□□□ -0.35
GGA3-201ENST00000537686 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
GGA3-201ENST00000537686 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
GGA3-201ENST00000537686 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
GGA3-201ENST00000537686 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
GGA3-201ENST00000537686 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
GGA3-201ENST00000537686 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
GGA3-201ENST00000537686 NCOA1Q15788 1441 aa12.85□□□□□ -0.35
GGA3-201ENST00000537686 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
GGA3-201ENST00000537686 AKNAQ7Z591 1439 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 APBB1O00213 710 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 MAGI3Q5TCQ9 1506 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 KCNJ4P48050 445 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 PANK3Q9H999 370 aa12.84□□□□□ -0.35
GGA3-201ENST00000537686 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.35
GGA3-201ENST00000537686 RBM19Q9Y4C8 960 aaKnown RBP12.83□□□□□ -0.35
GGA3-201ENST00000537686 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
GGA3-201ENST00000537686 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
GGA3-201ENST00000537686 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
GGA3-201ENST00000537686 EID1Q9Y6B2 187 aa12.83□□□□□ -0.36
GGA3-201ENST00000537686 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
GGA3-201ENST00000537686 NPHP1O15259 732 aa12.82□□□□□ -0.36
GGA3-201ENST00000537686 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
GGA3-201ENST00000537686 FGD1P98174 961 aa12.82□□□□□ -0.36
GGA3-201ENST00000537686 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
GGA3-201ENST00000537686 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
GGA3-201ENST00000537686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
GGA3-201ENST00000537686 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
GGA3-201ENST00000537686 USP47Q96K76 1375 aa12.81□□□□□ -0.36
GGA3-201ENST00000537686 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
GGA3-201ENST00000537686 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
GGA3-201ENST00000537686 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
GGA3-201ENST00000537686 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
GGA3-201ENST00000537686 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
GGA3-201ENST00000537686 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
GGA3-201ENST00000537686 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
GGA3-201ENST00000537686 MYBBP1AQ9BQG0 1328 aaKnown RBP12.78□□□□□ -0.36
GGA3-201ENST00000537686 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
GGA3-201ENST00000537686 ZRSR1Q15695 479 aaKnown RBP12.78□□□□□ -0.36
GGA3-201ENST00000537686 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
GGA3-201ENST00000537686 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
GGA3-201ENST00000537686 TCOF1Q13428 1488 aaKnown RBP12.77□□□□□ -0.36
GGA3-201ENST00000537686 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.37
GGA3-201ENST00000537686 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
GGA3-201ENST00000537686 ABCC2Q92887 1545 aa12.76□□□□□ -0.37
GGA3-201ENST00000537686 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
GGA3-201ENST00000537686 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
GGA3-201ENST00000537686 NAP1L2Q9ULW6 460 aaPredicted RBP12.76□□□□□ -0.37
GGA3-201ENST00000537686 PTMAP06454 111 aaKnown RBP12.76□□□□□ -0.37
GGA3-201ENST00000537686 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
GGA3-201ENST00000537686 AMPHP49418 695 aa12.75□□□□□ -0.37
GGA3-201ENST00000537686 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
GGA3-201ENST00000537686 PLCH2O75038 1416 aa12.75□□□□□ -0.37
GGA3-201ENST00000537686 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
GGA3-201ENST00000537686 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
GGA3-201ENST00000537686 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
GGA3-201ENST00000537686 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
GGA3-201ENST00000537686 FANCAO15360 1455 aa12.74□□□□□ -0.37
GGA3-201ENST00000537686 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
GGA3-201ENST00000537686 ADGRL1O94910 1474 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms