RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
PTPRR-205ENST00000537619 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
PTPRR-205ENST00000537619 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
PTPRR-205ENST00000537619 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
PTPRR-205ENST00000537619 KDM2AQ9Y2K7 1162 aa12.96□□□□□ -0.33
PTPRR-205ENST00000537619 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
PTPRR-205ENST00000537619 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
PTPRR-205ENST00000537619 A2MP01023 1474 aa12.96□□□□□ -0.34
PTPRR-205ENST00000537619 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
PTPRR-205ENST00000537619 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
PTPRR-205ENST00000537619 DCAF11Q8TEB1 546 aa12.95□□□□□ -0.34
PTPRR-205ENST00000537619 TRPM1Q7Z4N2 1603 aa12.94□□□□□ -0.34
PTPRR-205ENST00000537619 ATP10AO60312 1499 aa12.94□□□□□ -0.34
PTPRR-205ENST00000537619 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
PTPRR-205ENST00000537619 ASXL2Q76L83 1435 aa12.94□□□□□ -0.34
PTPRR-205ENST00000537619 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
PTPRR-205ENST00000537619 FANCAO15360 1455 aa12.93□□□□□ -0.34
PTPRR-205ENST00000537619 INO80Q9ULG1 1556 aaPredicted RBP12.93□□□□□ -0.34
PTPRR-205ENST00000537619 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
PTPRR-205ENST00000537619 DEPDC5O75140 1603 aa12.9□□□□□ -0.34
PTPRR-205ENST00000537619 ATP7AQ04656 1500 aa12.9□□□□□ -0.34
PTPRR-205ENST00000537619 RGL3Q3MIN7 710 aa12.9□□□□□ -0.34
PTPRR-205ENST00000537619 E9PCH4 1651 aa12.9□□□□□ -0.34
PTPRR-205ENST00000537619 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
PTPRR-205ENST00000537619 ST20-MTHFSA0A0A6YYL1 179 aa12.9□□□□□ -0.35
PTPRR-205ENST00000537619 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
PTPRR-205ENST00000537619 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPRR-205ENST00000537619 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
PTPRR-205ENST00000537619 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
PTPRR-205ENST00000537619 ADGRL1O94910 1474 aa12.88□□□□□ -0.35
PTPRR-205ENST00000537619 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
PTPRR-205ENST00000537619 VWDEQ8N2E2 1590 aa12.88□□□□□ -0.35
PTPRR-205ENST00000537619 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
PTPRR-205ENST00000537619 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
PTPRR-205ENST00000537619 LAMC1P11047 1609 aa12.86□□□□□ -0.35
PTPRR-205ENST00000537619 TRPM2O94759 1503 aa12.86□□□□□ -0.35
PTPRR-205ENST00000537619 PRDM15P57071 1507 aaPredicted RBP12.86□□□□□ -0.35
PTPRR-205ENST00000537619 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
PTPRR-205ENST00000537619 MRS2Q9HD23 443 aa12.86□□□□□ -0.35
PTPRR-205ENST00000537619 FKBP8Q14318 412 aa12.85□□□□□ -0.35
PTPRR-205ENST00000537619 PTPRTO14522 1441 aa12.85□□□□□ -0.35
PTPRR-205ENST00000537619 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
PTPRR-205ENST00000537619 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
PTPRR-205ENST00000537619 TET3O43151 1660 aa12.84□□□□□ -0.35
PTPRR-205ENST00000537619 KIDINS220Q9ULH0 1771 aa12.83□□□□□ -0.36
PTPRR-205ENST00000537619 SPHKAPQ2M3C7 1700 aa12.83□□□□□ -0.36
PTPRR-205ENST00000537619 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.36
PTPRR-205ENST00000537619 FAM9BQ8IZU0 186 aa12.82□□□□□ -0.36
PTPRR-205ENST00000537619 BCANQ96GW7 911 aa12.82□□□□□ -0.36
PTPRR-205ENST00000537619 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
PTPRR-205ENST00000537619 CNGB1Q14028 1251 aaPredicted RBP12.82□□□□□ -0.36
PTPRR-205ENST00000537619 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
PTPRR-205ENST00000537619 CEP152O94986 1710 aa12.81□□□□□ -0.36
PTPRR-205ENST00000537619 TESK2Q96S53 571 aa12.8□□□□□ -0.36
PTPRR-205ENST00000537619 KIF3BO15066 747 aa12.8□□□□□ -0.36
PTPRR-205ENST00000537619 DISP3Q9P2K9 1392 aa12.79□□□□□ -0.36
PTPRR-205ENST00000537619 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
PTPRR-205ENST00000537619 FRMPD1Q5SYB0 1578 aa12.78□□□□□ -0.36
PTPRR-205ENST00000537619 UGGT1Q9NYU2 1555 aa12.78□□□□□ -0.36
PTPRR-205ENST00000537619 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
PTPRR-205ENST00000537619 POGZQ7Z3K3 1410 aa12.78□□□□□ -0.36
PTPRR-205ENST00000537619 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.37
PTPRR-205ENST00000537619 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.37
PTPRR-205ENST00000537619 EFCAB6Q5THR3 1501 aa12.76□□□□□ -0.37
PTPRR-205ENST00000537619 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPRR-205ENST00000537619 KANK1Q14678 1352 aa12.76□□□□□ -0.37
PTPRR-205ENST00000537619 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
PTPRR-205ENST00000537619 IQGAP1P46940 1657 aa12.76□□□□□ -0.37
PTPRR-205ENST00000537619 CFAP74Q9C0B2 1584 aa12.75□□□□□ -0.37
PTPRR-205ENST00000537619 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
PTPRR-205ENST00000537619 NEFLP07196 543 aa12.74□□□□□ -0.37
PTPRR-205ENST00000537619 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
PTPRR-205ENST00000537619 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
PTPRR-205ENST00000537619 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
PTPRR-205ENST00000537619 MLH3Q9UHC1 1453 aa12.73□□□□□ -0.37
PTPRR-205ENST00000537619 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
PTPRR-205ENST00000537619 MROH2AA6NES4 1674 aa12.73□□□□□ -0.37
PTPRR-205ENST00000537619 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
PTPRR-205ENST00000537619 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
PTPRR-205ENST00000537619 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.38
PTPRR-205ENST00000537619 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.38
PTPRR-205ENST00000537619 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
PTPRR-205ENST00000537619 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
PTPRR-205ENST00000537619 BRD4O60885 1362 aaPredicted RBP12.7□□□□□ -0.38
PTPRR-205ENST00000537619 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
PTPRR-205ENST00000537619 IFT172Q9UG01 1749 aa12.69□□□□□ -0.38
PTPRR-205ENST00000537619 MYOM2P54296 1465 aa12.69□□□□□ -0.38
PTPRR-205ENST00000537619 SCAF11Q99590 1463 aaKnown RBP12.69□□□□□ -0.38
PTPRR-205ENST00000537619 MAP3K4Q9Y6R4 1608 aa12.69□□□□□ -0.38
PTPRR-205ENST00000537619 RALBP1Q15311 655 aa12.69□□□□□ -0.38
PTPRR-205ENST00000537619 NPATQ14207 1427 aa12.68□□□□□ -0.38
PTPRR-205ENST00000537619 NEO1Q92859 1461 aa12.68□□□□□ -0.38
PTPRR-205ENST00000537619 ADGRB3O60242 1522 aa12.68□□□□□ -0.38
PTPRR-205ENST00000537619 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
PTPRR-205ENST00000537619 TMF1P82094 1093 aa12.68□□□□□ -0.38
PTPRR-205ENST00000537619 ADGRF5Q8IZF2 1346 aa12.68□□□□□ -0.38
PTPRR-205ENST00000537619 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
PTPRR-205ENST00000537619 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
PTPRR-205ENST00000537619 PANK3Q9H999 370 aa12.67□□□□□ -0.38
PTPRR-205ENST00000537619 KIF1BO60333 1816 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms