RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ZNF830Q96NB3 372 aaPredicted RBP10.81□□□□□ -0.68
SRGAP1-202ENST00000537556 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 CHMP5Q9NZZ3 219 aa10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 POLR1AO95602 1720 aaPredicted RBP10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 USP19O94966 1318 aa10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 HS1BP3Q53T59 392 aa10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 PLIN1O60240 522 aa10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
SRGAP1-202ENST00000537556 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
SRGAP1-202ENST00000537556 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
SRGAP1-202ENST00000537556 ARHGAP35Q9NRY4 1499 aa10.79□□□□□ -0.68
SRGAP1-202ENST00000537556 TEX2Q8IWB9 1127 aa10.79□□□□□ -0.68
SRGAP1-202ENST00000537556 ARID3AQ99856 593 aa10.79□□□□□ -0.68
SRGAP1-202ENST00000537556 PTMSP20962 102 aa10.78□□□□□ -0.68
SRGAP1-202ENST00000537556 NCBP3Q53F19 620 aaKnown RBP10.78□□□□□ -0.68
SRGAP1-202ENST00000537556 ZNF500O60304 480 aaPredicted RBP10.78□□□□□ -0.68
SRGAP1-202ENST00000537556 DNTTIP2Q5QJE6 756 aaKnown RBP10.78□□□□□ -0.68
SRGAP1-202ENST00000537556 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
SRGAP1-202ENST00000537556 VGLL3A8MV65 326 aa10.77□□□□□ -0.68
SRGAP1-202ENST00000537556 SKOR2Q2VWA4 1001 aaPredicted RBP10.77□□□□□ -0.68
SRGAP1-202ENST00000537556 HFM1A2PYH4 1435 aa10.77□□□□□ -0.69
SRGAP1-202ENST00000537556 PDS5BQ9NTI5 1447 aa10.77□□□□□ -0.69
SRGAP1-202ENST00000537556 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
SRGAP1-202ENST00000537556 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
SRGAP1-202ENST00000537556 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
SRGAP1-202ENST00000537556 NESP48681 1621 aa10.76□□□□□ -0.69
SRGAP1-202ENST00000537556 VIRMAQ69YN4 1812 aaKnown RBP10.75□□□□□ -0.69
SRGAP1-202ENST00000537556 NASPP49321 788 aaPredicted RBP10.75□□□□□ -0.69
SRGAP1-202ENST00000537556 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
SRGAP1-202ENST00000537556 CADPSQ9ULU8 1353 aa10.75□□□□□ -0.69
SRGAP1-202ENST00000537556 FMN1Q68DA7 1419 aa10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 MAPK8IP3Q9UPT6 1336 aa10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 MCM5P33992 734 aa10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
SRGAP1-202ENST00000537556 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
SRGAP1-202ENST00000537556 ROCK2O75116 1388 aaKnown RBP10.73□□□□□ -0.69
SRGAP1-202ENST00000537556 IRX3P78415 501 aaPredicted RBP10.72□□□□□ -0.69
SRGAP1-202ENST00000537556 RALBP1Q15311 655 aa10.72□□□□□ -0.69
SRGAP1-202ENST00000537556 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
SRGAP1-202ENST00000537556 L3MBTL2Q969R5 705 aa10.72□□□□□ -0.69
SRGAP1-202ENST00000537556 MIA2Q96PC5 1412 aa10.72□□□□□ -0.69
SRGAP1-202ENST00000537556 PTPN23Q9H3S7 1636 aa10.72□□□□□ -0.69
SRGAP1-202ENST00000537556 SLC20A2Q08357 652 aa10.71□□□□□ -0.69
SRGAP1-202ENST00000537556 FOXD1Q16676 465 aa10.71□□□□□ -0.69
SRGAP1-202ENST00000537556 TBC1D32Q96NH3 1257 aa10.71□□□□□ -0.69
SRGAP1-202ENST00000537556 GBP4Q96PP9 640 aa10.71□□□□□ -0.69
SRGAP1-202ENST00000537556 CBX1P83916 185 aa10.71□□□□□ -0.69
SRGAP1-202ENST00000537556 KIF15Q9NS87 1388 aa10.71□□□□□ -0.69
SRGAP1-202ENST00000537556 CDCA7LQ96GN5 454 aa10.71□□□□□ -0.7
SRGAP1-202ENST00000537556 DNAJC2Q99543 621 aaKnown RBP10.71□□□□□ -0.7
SRGAP1-202ENST00000537556 C20orf194Q5TEA3 1177 aa10.7□□□□□ -0.7
SRGAP1-202ENST00000537556 CGNQ9P2M7 1197 aaKnown RBP10.7□□□□□ -0.7
SRGAP1-202ENST00000537556 CFTRP13569 1480 aa10.7□□□□□ -0.7
SRGAP1-202ENST00000537556 SEC24BO95487 1268 aa10.7□□□□□ -0.7
SRGAP1-202ENST00000537556 XPCQ01831 940 aaPredicted RBP10.7□□□□□ -0.7
SRGAP1-202ENST00000537556 WDR62O43379 1518 aa10.7□□□□□ -0.7
SRGAP1-202ENST00000537556 NLRP1Q9C000 1473 aa10.69□□□□□ -0.7
SRGAP1-202ENST00000537556 SECISBP2LQ93073 1101 aaKnown RBP10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 IBTKQ9P2D0 1353 aaPredicted RBP10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 ZKSCAN5Q9Y2L8 839 aa10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 NAIPQ13075 1403 aa10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 HMGN5P82970 282 aaKnown RBP10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 POLR3GLQ9BT43 218 aa10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 CCDC144AA2RUR9 1427 aa10.68□□□□□ -0.7
SRGAP1-202ENST00000537556 INSRP06213 1382 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 PLEKHH2Q8IVE3 1493 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 MRC2Q9UBG0 1479 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 MYRIPQ8NFW9 859 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 NBPF1Q3BBV0 1214 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 RGS22Q8NE09 1264 aa10.67□□□□□ -0.7
SRGAP1-202ENST00000537556 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.7
SRGAP1-202ENST00000537556 NLRP13Q86W25 1043 aa10.66□□□□□ -0.7
SRGAP1-202ENST00000537556 PRIMPOLQ96LW4 560 aa10.66□□□□□ -0.7
SRGAP1-202ENST00000537556 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
SRGAP1-202ENST00000537556 ZMYM3Q14202 1370 aa10.65□□□□□ -0.7
SRGAP1-202ENST00000537556 ZNF771Q7L3S4 317 aaPredicted RBP10.65□□□□□ -0.7
SRGAP1-202ENST00000537556 RBM25P49756 843 aaKnown RBP10.65□□□□□ -0.7
SRGAP1-202ENST00000537556 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
SRGAP1-202ENST00000537556 FGD6Q6ZV73 1430 aa10.65□□□□□ -0.7
SRGAP1-202ENST00000537556 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
SRGAP1-202ENST00000537556 TOP2BQ02880 1626 aa10.65□□□□□ -0.71
SRGAP1-202ENST00000537556 CCDC66A2RUB6 948 aa10.65□□□□□ -0.71
SRGAP1-202ENST00000537556 GOLGA6L22H0YM25 854 aa10.65□□□□□ -0.71
SRGAP1-202ENST00000537556 NBPF8Q3BBV2 869 aa10.65□□□□□ -0.71
SRGAP1-202ENST00000537556 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
SRGAP1-202ENST00000537556 HSCBQ8IWL3 235 aa10.64□□□□□ -0.71
SRGAP1-202ENST00000537556 ZMYM4Q5VZL5 1548 aa10.64□□□□□ -0.71
SRGAP1-202ENST00000537556 PDLIM2Q96JY6 352 aa10.64□□□□□ -0.71
SRGAP1-202ENST00000537556 CCDC39Q9UFE4 941 aa10.63□□□□□ -0.71
SRGAP1-202ENST00000537556 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.63□□□□□ -0.71
SRGAP1-202ENST00000537556 ZBTB22O15209 634 aa10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 GTF2F1P35269 517 aaKnown RBP eCLIP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms