RNA–Protein interactions for RNA: ENST00000536917.1

LRTOMT-212, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-212ENST00000536917 KDM5DQ9BY66 1539 aa12.88□□□□□ -0.35
LRTOMT-212ENST00000536917 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
LRTOMT-212ENST00000536917 KIF3BO15066 747 aa12.87□□□□□ -0.35
LRTOMT-212ENST00000536917 RNF17Q9BXT8 1623 aaKnown RBP12.87□□□□□ -0.35
LRTOMT-212ENST00000536917 PZPP20742 1482 aa12.86□□□□□ -0.35
LRTOMT-212ENST00000536917 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
LRTOMT-212ENST00000536917 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
LRTOMT-212ENST00000536917 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
LRTOMT-212ENST00000536917 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
LRTOMT-212ENST00000536917 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
LRTOMT-212ENST00000536917 MROH1Q8NDA8 1641 aa12.84□□□□□ -0.35
LRTOMT-212ENST00000536917 EIF2AK4Q9P2K8 1649 aaKnown RBP12.84□□□□□ -0.35
LRTOMT-212ENST00000536917 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
LRTOMT-212ENST00000536917 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
LRTOMT-212ENST00000536917 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
LRTOMT-212ENST00000536917 SHANK2Q9UPX8 1470 aa12.82□□□□□ -0.36
LRTOMT-212ENST00000536917 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
LRTOMT-212ENST00000536917 ABCC3O15438 1527 aa12.82□□□□□ -0.36
LRTOMT-212ENST00000536917 TNRQ92752 1358 aa12.81□□□□□ -0.36
LRTOMT-212ENST00000536917 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
LRTOMT-212ENST00000536917 ABCC5O15440 1437 aa12.81□□□□□ -0.36
LRTOMT-212ENST00000536917 ZC3H13Q5T200 1668 aaKnown RBP12.81□□□□□ -0.36
LRTOMT-212ENST00000536917 PKD2Q13563 968 aa12.81□□□□□ -0.36
LRTOMT-212ENST00000536917 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
LRTOMT-212ENST00000536917 DUOX2Q9NRD8 1548 aa12.8□□□□□ -0.36
LRTOMT-212ENST00000536917 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
LRTOMT-212ENST00000536917 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
LRTOMT-212ENST00000536917 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
LRTOMT-212ENST00000536917 NEURL4Q96JN8 1562 aa12.78□□□□□ -0.36
LRTOMT-212ENST00000536917 POLR1AO95602 1720 aaPredicted RBP12.78□□□□□ -0.36
LRTOMT-212ENST00000536917 DAPK1P53355 1430 aa12.77□□□□□ -0.37
LRTOMT-212ENST00000536917 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
LRTOMT-212ENST00000536917 CEP152O94986 1710 aa12.76□□□□□ -0.37
LRTOMT-212ENST00000536917 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
LRTOMT-212ENST00000536917 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
LRTOMT-212ENST00000536917 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
LRTOMT-212ENST00000536917 CFAP65Q6ZU64 1925 aaKnown RBP12.76□□□□□ -0.37
LRTOMT-212ENST00000536917 ERVK-7P63135 1459 aa12.75□□□□□ -0.37
LRTOMT-212ENST00000536917 APLP2Q06481 763 aa12.75□□□□□ -0.37
LRTOMT-212ENST00000536917 ERBINQ96RT1 1412 aa12.75□□□□□ -0.37
LRTOMT-212ENST00000536917 ARHGAP31Q2M1Z3 1444 aa12.74□□□□□ -0.37
LRTOMT-212ENST00000536917 UGGT1Q9NYU2 1555 aa12.73□□□□□ -0.37
LRTOMT-212ENST00000536917 MED14O60244 1454 aa12.73□□□□□ -0.37
LRTOMT-212ENST00000536917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
LRTOMT-212ENST00000536917 THEMISQ8N1K5 641 aaPredicted RBP12.72□□□□□ -0.37
LRTOMT-212ENST00000536917 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
LRTOMT-212ENST00000536917 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
LRTOMT-212ENST00000536917 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
LRTOMT-212ENST00000536917 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
LRTOMT-212ENST00000536917 ANKLE2Q86XL3 938 aa12.7□□□□□ -0.38
LRTOMT-212ENST00000536917 LMTK2Q8IWU2 1503 aa12.7□□□□□ -0.38
LRTOMT-212ENST00000536917 ANKRD30AQ9BXX3 1397 aa12.69□□□□□ -0.38
LRTOMT-212ENST00000536917 NPHP4O75161 1426 aaPredicted RBP12.68□□□□□ -0.38
LRTOMT-212ENST00000536917 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
LRTOMT-212ENST00000536917 ARHGAP23Q9P227 1491 aa12.67□□□□□ -0.38
LRTOMT-212ENST00000536917 SLIT1O75093 1534 aa12.67□□□□□ -0.38
LRTOMT-212ENST00000536917 CPS1P31327 1500 aa12.67□□□□□ -0.38
LRTOMT-212ENST00000536917 CHIC2Q9UKJ5 165 aa12.66□□□□□ -0.38
LRTOMT-212ENST00000536917 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
LRTOMT-212ENST00000536917 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
LRTOMT-212ENST00000536917 PIK3C2BO00750 1634 aa12.64□□□□□ -0.39
LRTOMT-212ENST00000536917 SYNMO15061 1565 aa12.64□□□□□ -0.39
LRTOMT-212ENST00000536917 NOS1P29475 1434 aa12.63□□□□□ -0.39
LRTOMT-212ENST00000536917 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
LRTOMT-212ENST00000536917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRTOMT-212ENST00000536917 KANK1Q14678 1352 aa12.63□□□□□ -0.39
LRTOMT-212ENST00000536917 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
LRTOMT-212ENST00000536917 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
LRTOMT-212ENST00000536917 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
LRTOMT-212ENST00000536917 LTKP29376 864 aa12.62□□□□□ -0.39
LRTOMT-212ENST00000536917 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
LRTOMT-212ENST00000536917 FAM50AQ14320 339 aaKnown RBP12.61□□□□□ -0.39
LRTOMT-212ENST00000536917 IDI1Q13907 227 aa12.6□□□□□ -0.39
LRTOMT-212ENST00000536917 ROCK1Q13464 1354 aa12.59□□□□□ -0.39
LRTOMT-212ENST00000536917 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
LRTOMT-212ENST00000536917 UNC13BO14795 1591 aa12.59□□□□□ -0.39
LRTOMT-212ENST00000536917 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
LRTOMT-212ENST00000536917 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
LRTOMT-212ENST00000536917 TET3O43151 1660 aa12.58□□□□□ -0.4
LRTOMT-212ENST00000536917 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
LRTOMT-212ENST00000536917 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
LRTOMT-212ENST00000536917 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
LRTOMT-212ENST00000536917 ADGRB3O60242 1522 aa12.56□□□□□ -0.4
LRTOMT-212ENST00000536917 TOM1O60784 492 aa12.55□□□□□ -0.4
LRTOMT-212ENST00000536917 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
LRTOMT-212ENST00000536917 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
LRTOMT-212ENST00000536917 MYO5BQ9ULV0 1848 aa12.54□□□□□ -0.4
LRTOMT-212ENST00000536917 EID1Q9Y6B2 187 aa12.54□□□□□ -0.4
LRTOMT-212ENST00000536917 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
LRTOMT-212ENST00000536917 E9PCH4 1651 aa12.54□□□□□ -0.4
LRTOMT-212ENST00000536917 ILDR2Q71H61 639 aa12.53□□□□□ -0.4
LRTOMT-212ENST00000536917 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.4
LRTOMT-212ENST00000536917 HSPA1LP34931 641 aa12.52□□□□□ -0.41
LRTOMT-212ENST00000536917 ZFYVE9O95405 1425 aa12.52□□□□□ -0.41
LRTOMT-212ENST00000536917 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
LRTOMT-212ENST00000536917 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
LRTOMT-212ENST00000536917 RRBP1Q9P2E9 1410 aaKnown RBP12.49□□□□□ -0.41
LRTOMT-212ENST00000536917 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
LRTOMT-212ENST00000536917 KCNA6P17658 529 aa12.48□□□□□ -0.41
LRTOMT-212ENST00000536917 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms