RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
SMG6-203ENST00000536871 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
SMG6-203ENST00000536871 USP47Q96K76 1375 aa18.86■□□□□ 0.61
SMG6-203ENST00000536871 CFAP74Q9C0B2 1584 aa18.85■□□□□ 0.61
SMG6-203ENST00000536871 ADGRL1O94910 1474 aa18.85■□□□□ 0.61
SMG6-203ENST00000536871 STAC3Q96MF2 364 aa18.84■□□□□ 0.61
SMG6-203ENST00000536871 INO80Q9ULG1 1556 aaPredicted RBP18.84■□□□□ 0.61
SMG6-203ENST00000536871 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
SMG6-203ENST00000536871 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.61
SMG6-203ENST00000536871 KANK1Q14678 1352 aa18.83■□□□□ 0.6
SMG6-203ENST00000536871 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
SMG6-203ENST00000536871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.66e-8■■■■□ 25.6
SMG6-203ENST00000536871 KDM5CP41229 1560 aa18.82■□□□□ 0.6
SMG6-203ENST00000536871 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
SMG6-203ENST00000536871 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
SMG6-203ENST00000536871 DEPDC5O75140 1603 aa18.81■□□□□ 0.6
SMG6-203ENST00000536871 KIF7Q2M1P5 1343 aa18.8■□□□□ 0.6
SMG6-203ENST00000536871 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
SMG6-203ENST00000536871 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
SMG6-203ENST00000536871 ZNF518AQ6AHZ1 1483 aa18.79■□□□□ 0.6
SMG6-203ENST00000536871 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
SMG6-203ENST00000536871 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
SMG6-203ENST00000536871 PRAG1Q86YV5 1406 aa18.78■□□□□ 0.6
SMG6-203ENST00000536871 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
SMG6-203ENST00000536871 LAMC1P11047 1609 aa18.76■□□□□ 0.59
SMG6-203ENST00000536871 GPRASP1Q5JY77 1395 aa18.76■□□□□ 0.59
SMG6-203ENST00000536871 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
SMG6-203ENST00000536871 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
SMG6-203ENST00000536871 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
SMG6-203ENST00000536871 PTPRTO14522 1441 aa18.75■□□□□ 0.59
SMG6-203ENST00000536871 TET3O43151 1660 aa18.74■□□□□ 0.59
SMG6-203ENST00000536871 TRPM2O94759 1503 aa18.74■□□□□ 0.59
SMG6-203ENST00000536871 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
SMG6-203ENST00000536871 A2MP01023 1474 aa18.73■□□□□ 0.59
SMG6-203ENST00000536871 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
SMG6-203ENST00000536871 NEO1Q92859 1461 aa18.72■□□□□ 0.59
SMG6-203ENST00000536871 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
SMG6-203ENST00000536871 TRPM1Q7Z4N2 1603 aa18.72■□□□□ 0.59
SMG6-203ENST00000536871 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
SMG6-203ENST00000536871 MLH3Q9UHC1 1453 aa18.7■□□□□ 0.58
SMG6-203ENST00000536871 POGZQ7Z3K3 1410 aa18.69■□□□□ 0.58
SMG6-203ENST00000536871 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
SMG6-203ENST00000536871 E9PCH4 1651 aa18.68■□□□□ 0.58
SMG6-203ENST00000536871 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
SMG6-203ENST00000536871 LMTK2Q8IWU2 1503 aa18.68■□□□□ 0.58
SMG6-203ENST00000536871 KIF3BO15066 747 aa18.66■□□□□ 0.58
SMG6-203ENST00000536871 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
SMG6-203ENST00000536871 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
SMG6-203ENST00000536871 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
SMG6-203ENST00000536871 RGL3Q3MIN7 710 aa18.65■□□□□ 0.58
SMG6-203ENST00000536871 RNF17Q9BXT8 1623 aaKnown RBP18.64■□□□□ 0.57
SMG6-203ENST00000536871 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
SMG6-203ENST00000536871 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
SMG6-203ENST00000536871 CEP152O94986 1710 aa18.63■□□□□ 0.57
SMG6-203ENST00000536871 MROH1Q8NDA8 1641 aa18.62■□□□□ 0.57
SMG6-203ENST00000536871 EFCAB6Q5THR3 1501 aa18.61■□□□□ 0.57
SMG6-203ENST00000536871 GLI2P10070 1586 aa18.6■□□□□ 0.57
SMG6-203ENST00000536871 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
SMG6-203ENST00000536871 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
SMG6-203ENST00000536871 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
SMG6-203ENST00000536871 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
SMG6-203ENST00000536871 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
SMG6-203ENST00000536871 MYOM2P54296 1465 aa18.55■□□□□ 0.56
SMG6-203ENST00000536871 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
SMG6-203ENST00000536871 RALBP1Q15311 655 aa18.55■□□□□ 0.56
SMG6-203ENST00000536871 TMF1P82094 1093 aa18.54■□□□□ 0.56
SMG6-203ENST00000536871 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMG6-203ENST00000536871 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
SMG6-203ENST00000536871 MAP3K4Q9Y6R4 1608 aa18.54■□□□□ 0.56
SMG6-203ENST00000536871 NEFLP07196 543 aa18.53■□□□□ 0.56
SMG6-203ENST00000536871 NBPF1Q3BBV0 1214 aa18.53■□□□□ 0.56
SMG6-203ENST00000536871 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
SMG6-203ENST00000536871 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
SMG6-203ENST00000536871 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
SMG6-203ENST00000536871 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.56
SMG6-203ENST00000536871 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
SMG6-203ENST00000536871 SCAF11Q99590 1463 aaKnown RBP18.51■□□□□ 0.55
SMG6-203ENST00000536871 TESK2Q96S53 571 aa18.5■□□□□ 0.55
SMG6-203ENST00000536871 PPRC1Q5VV67 1664 aaKnown RBP18.49■□□□□ 0.55
SMG6-203ENST00000536871 ABCA6Q8N139 1617 aa18.48■□□□□ 0.55
SMG6-203ENST00000536871 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
SMG6-203ENST00000536871 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
SMG6-203ENST00000536871 KIF1BO60333 1816 aa18.47■□□□□ 0.55
SMG6-203ENST00000536871 RPGRIP1LQ68CZ1 1315 aa18.47■□□□□ 0.55
SMG6-203ENST00000536871 IQGAP1P46940 1657 aa18.46■□□□□ 0.55
SMG6-203ENST00000536871 MYBBP1AQ9BQG0 1328 aaKnown RBP18.46■□□□□ 0.55
SMG6-203ENST00000536871 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
SMG6-203ENST00000536871 DIP2CQ9Y2E4 1556 aa18.45■□□□□ 0.54
SMG6-203ENST00000536871 ABCC3O15438 1527 aa18.45■□□□□ 0.54
SMG6-203ENST00000536871 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
SMG6-203ENST00000536871 RIMBP3CA6NJZ7 1639 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 RIMBP3BA6NNM3 1639 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 RIMBP3Q9UFD9 1639 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
SMG6-203ENST00000536871 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 NPATQ14207 1427 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 RICTORQ6R327 1708 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
SMG6-203ENST00000536871 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
SMG6-203ENST00000536871 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 471.4 ms