RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 BCAMP50895 628 aa11.26□□□□□ -0.61
KNTC1-209ENST00000536625 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
KNTC1-209ENST00000536625 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
KNTC1-209ENST00000536625 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
KNTC1-209ENST00000536625 KIAA1468Q9P260 1216 aa11.2□□□□□ -0.62
KNTC1-209ENST00000536625 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
KNTC1-209ENST00000536625 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
KNTC1-209ENST00000536625 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
KNTC1-209ENST00000536625 PHF14O94880 888 aa11.17□□□□□ -0.62
KNTC1-209ENST00000536625 LAPTM4BQ86VI4 370 aa11.17□□□□□ -0.62
KNTC1-209ENST00000536625 ZFRQ96KR1 1074 aaKnown RBP11.17□□□□□ -0.62
KNTC1-209ENST00000536625 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
KNTC1-209ENST00000536625 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
KNTC1-209ENST00000536625 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
KNTC1-209ENST00000536625 Q6ZNB5 142 aa11.12□□□□□ -0.63
KNTC1-209ENST00000536625 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
KNTC1-209ENST00000536625 KCNC4Q03721 635 aa11.1□□□□□ -0.63
KNTC1-209ENST00000536625 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
KNTC1-209ENST00000536625 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
KNTC1-209ENST00000536625 DPYSL4O14531 572 aa11.07□□□□□ -0.64
KNTC1-209ENST00000536625 LCE2BO14633 110 aa11.07□□□□□ -0.64
KNTC1-209ENST00000536625 DCAF8L2P0C7V8 631 aa11.07□□□□□ -0.64
KNTC1-209ENST00000536625 CAMK2BQ13554 666 aa11.07□□□□□ -0.64
KNTC1-209ENST00000536625 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
KNTC1-209ENST00000536625 EPAS1Q99814 870 aa11.07□□□□□ -0.64
KNTC1-209ENST00000536625 FAM98CQ17RN3 349 aaKnown RBP11.06□□□□□ -0.64
KNTC1-209ENST00000536625 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
KNTC1-209ENST00000536625 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
KNTC1-209ENST00000536625 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
KNTC1-209ENST00000536625 DDX12PQ92771 950 aa11.03□□□□□ -0.64
KNTC1-209ENST00000536625 LRCH3Q96II8 777 aa11.02□□□□□ -0.65
KNTC1-209ENST00000536625 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
KNTC1-209ENST00000536625 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
KNTC1-209ENST00000536625 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
KNTC1-209ENST00000536625 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
KNTC1-209ENST00000536625 C3orf80F5H4A9 247 aa10.94□□□□□ -0.66
KNTC1-209ENST00000536625 SMAPO00193 183 aa10.94□□□□□ -0.66
KNTC1-209ENST00000536625 GFRA3O60609 400 aa10.94□□□□□ -0.66
KNTC1-209ENST00000536625 NBR1Q14596 966 aa10.94□□□□□ -0.66
KNTC1-209ENST00000536625 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
KNTC1-209ENST00000536625 FAM198AQ9UFP1 575 aa10.94□□□□□ -0.66
KNTC1-209ENST00000536625 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
KNTC1-209ENST00000536625 MAP3K7O43318 606 aa10.92□□□□□ -0.66
KNTC1-209ENST00000536625 PPP4CP60510 307 aa10.92□□□□□ -0.66
KNTC1-209ENST00000536625 LAPTM4AQ15012 233 aa10.92□□□□□ -0.66
KNTC1-209ENST00000536625 SAMD7Q7Z3H4 446 aa10.92□□□□□ -0.66
KNTC1-209ENST00000536625 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
KNTC1-209ENST00000536625 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
KNTC1-209ENST00000536625 PRKD2Q9BZL6 878 aa10.9□□□□□ -0.66
KNTC1-209ENST00000536625 PDIA6Q15084 440 aa10.89□□□□□ -0.67
KNTC1-209ENST00000536625 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
KNTC1-209ENST00000536625 MTRQ99707 1265 aa10.89□□□□□ -0.67
KNTC1-209ENST00000536625 PPP1R18Q6NYC8 613 aa10.87□□□□□ -0.67
KNTC1-209ENST00000536625 PRSS12P56730 875 aa10.86□□□□□ -0.67
KNTC1-209ENST00000536625 ZNF516Q92618 1163 aa10.86□□□□□ -0.67
KNTC1-209ENST00000536625 NRG2O14511 850 aaPredicted RBP10.84□□□□□ -0.67
KNTC1-209ENST00000536625 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
KNTC1-209ENST00000536625 TATDN2Q93075 761 aa10.83□□□□□ -0.68
KNTC1-209ENST00000536625 APLP1P51693 650 aa10.81□□□□□ -0.68
KNTC1-209ENST00000536625 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
KNTC1-209ENST00000536625 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
KNTC1-209ENST00000536625 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
KNTC1-209ENST00000536625 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
KNTC1-209ENST00000536625 SPDYE16A6NNV3 312 aaPredicted RBP10.79□□□□□ -0.68
KNTC1-209ENST00000536625 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.79□□□□□ -0.68
KNTC1-209ENST00000536625 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
KNTC1-209ENST00000536625 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
KNTC1-209ENST00000536625 GRXCR2A6NFK2 248 aa10.77□□□□□ -0.69
KNTC1-209ENST00000536625 NUDT18Q6ZVK8 323 aa10.77□□□□□ -0.69
KNTC1-209ENST00000536625 SPRYD3Q8NCJ5 442 aa10.77□□□□□ -0.69
KNTC1-209ENST00000536625 RNF40O75150 1001 aa10.76□□□□□ -0.69
KNTC1-209ENST00000536625 PAXIP1Q6ZW49 1069 aaPredicted RBP10.76□□□□□ -0.69
KNTC1-209ENST00000536625 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
KNTC1-209ENST00000536625 OSBPP22059 807 aa10.74□□□□□ -0.69
KNTC1-209ENST00000536625 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
KNTC1-209ENST00000536625 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
KNTC1-209ENST00000536625 COPS2P61201 443 aa10.71□□□□□ -0.69
KNTC1-209ENST00000536625 ZNF787Q6DD87 383 aa10.71□□□□□ -0.69
KNTC1-209ENST00000536625 E2F4Q16254 413 aa10.7□□□□□ -0.7
KNTC1-209ENST00000536625 SWT1Q5T5J6 900 aaKnown RBP10.7□□□□□ -0.7
KNTC1-209ENST00000536625 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
KNTC1-209ENST00000536625 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
KNTC1-209ENST00000536625 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
KNTC1-209ENST00000536625 RBM27Q9P2N5 1060 aaKnown RBP10.68□□□□□ -0.7
KNTC1-209ENST00000536625 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
KNTC1-209ENST00000536625 PADI6Q6TGC4 694 aa10.67□□□□□ -0.7
KNTC1-209ENST00000536625 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
KNTC1-209ENST00000536625 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
KNTC1-209ENST00000536625 EMID1Q96A84 441 aaPredicted RBP10.66□□□□□ -0.7
KNTC1-209ENST00000536625 ZNF775Q96BV0 537 aaPredicted RBP10.66□□□□□ -0.7
KNTC1-209ENST00000536625 ZPR1O75312 459 aa10.63□□□□□ -0.71
KNTC1-209ENST00000536625 GGCXP38435 758 aa10.62□□□□□ -0.71
KNTC1-209ENST00000536625 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
KNTC1-209ENST00000536625 TMUB1Q9BVT8 246 aa10.62□□□□□ -0.71
KNTC1-209ENST00000536625 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
KNTC1-209ENST00000536625 EYA1Q99502 592 aa10.61□□□□□ -0.71
KNTC1-209ENST00000536625 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
KNTC1-209ENST00000536625 BLOC1S3Q6QNY0 202 aa10.58□□□□□ -0.72
KNTC1-209ENST00000536625 NECTIN2Q92692 538 aa10.58□□□□□ -0.72
KNTC1-209ENST00000536625 TLL1O43897 1013 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms