RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
CCND1-203ENST00000536559 MAST1Q9Y2H9 1570 aa25.93■■□□□ 1.74
CCND1-203ENST00000536559 PKD2Q13563 968 aa25.92■■□□□ 1.74
CCND1-203ENST00000536559 MYO3AQ8NEV4 1616 aa25.92■■□□□ 1.74
CCND1-203ENST00000536559 CEP170BQ9Y4F5 1589 aaPredicted RBP25.9■■□□□ 1.74
CCND1-203ENST00000536559 NCKAP5LQ9HCH0 1330 aa25.88■■□□□ 1.73
CCND1-203ENST00000536559 ZNF142P52746 1687 aaPredicted RBP25.88■■□□□ 1.73
CCND1-203ENST00000536559 TNRQ92752 1358 aa25.88■■□□□ 1.73
CCND1-203ENST00000536559 FBXO31Q5XUX0 539 aaPredicted RBP25.87■■□□□ 1.73
CCND1-203ENST00000536559 PZPP20742 1482 aa25.86■■□□□ 1.73
CCND1-203ENST00000536559 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
CCND1-203ENST00000536559 PLA2R1Q13018 1463 aa25.85■■□□□ 1.73
CCND1-203ENST00000536559 PTPN23Q9H3S7 1636 aa25.84■■□□□ 1.73
CCND1-203ENST00000536559 DUOX2Q9NRD8 1548 aa25.83■■□□□ 1.72
CCND1-203ENST00000536559 EIF2AK4Q9P2K8 1649 aaKnown RBP25.82■■□□□ 1.72
CCND1-203ENST00000536559 RRP7BPQ9NSQ0 103 aa25.81■■□□□ 1.72
CCND1-203ENST00000536559 FGD6Q6ZV73 1430 aa25.8■■□□□ 1.72
CCND1-203ENST00000536559 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
CCND1-203ENST00000536559 RNF17Q9BXT8 1623 aaKnown RBP25.8■■□□□ 1.72
CCND1-203ENST00000536559 KIF15Q9NS87 1388 aa25.8■■□□□ 1.72
CCND1-203ENST00000536559 ABCC5O15440 1437 aa25.8■■□□□ 1.72
CCND1-203ENST00000536559 SHANK2Q9UPX8 1470 aa25.79■■□□□ 1.72
CCND1-203ENST00000536559 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
CCND1-203ENST00000536559 ZC3H13Q5T200 1668 aaKnown RBP25.77■■□□□ 1.72
CCND1-203ENST00000536559 DAPK1P53355 1430 aa25.77■■□□□ 1.72
CCND1-203ENST00000536559 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
CCND1-203ENST00000536559 NLRP1Q9C000 1473 aa25.76■■□□□ 1.71
CCND1-203ENST00000536559 ABCC3O15438 1527 aa25.75■■□□□ 1.71
CCND1-203ENST00000536559 ANKRD30AQ9BXX3 1397 aa25.75■■□□□ 1.71
CCND1-203ENST00000536559 ANKLE2Q86XL3 938 aa25.75■■□□□ 1.71
CCND1-203ENST00000536559 CROCC2H7BZ55 1655 aa25.74■■□□□ 1.71
CCND1-203ENST00000536559 ERBINQ96RT1 1412 aa25.73■■□□□ 1.71
CCND1-203ENST00000536559 FAM50AQ14320 339 aaKnown RBP25.73■■□□□ 1.71
CCND1-203ENST00000536559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.73■■□□□ 1.711e-6■■□□□ 11.9
CCND1-203ENST00000536559 CHIC2Q9UKJ5 165 aa25.73■■□□□ 1.71
CCND1-203ENST00000536559 KANK1Q14678 1352 aa25.72■■□□□ 1.71
CCND1-203ENST00000536559 LTBP4Q8N2S1 1624 aa25.72■■□□□ 1.71
CCND1-203ENST00000536559 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
CCND1-203ENST00000536559 ZNF335Q9H4Z2 1342 aaPredicted RBP25.7■■□□□ 1.71
CCND1-203ENST00000536559 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
CCND1-203ENST00000536559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.69■■□□□ 1.72e-6■□□□□ 9.2
CCND1-203ENST00000536559 CEP152O94986 1710 aa25.66■■□□□ 1.7
CCND1-203ENST00000536559 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
CCND1-203ENST00000536559 POLR1AO95602 1720 aaPredicted RBP25.65■■□□□ 1.7
CCND1-203ENST00000536559 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
CCND1-203ENST00000536559 SPATA31D1Q6ZQQ2 1576 aa25.65■■□□□ 1.7
CCND1-203ENST00000536559 CFAP65Q6ZU64 1925 aaKnown RBP25.65■■□□□ 1.7
CCND1-203ENST00000536559 PRDM15P57071 1507 aaPredicted RBP25.63■■□□□ 1.69
CCND1-203ENST00000536559 ARHGAP31Q2M1Z3 1444 aa25.61■■□□□ 1.69
CCND1-203ENST00000536559 UBAP1LF5GYI3 381 aa25.59■■□□□ 1.69
CCND1-203ENST00000536559 STAG3Q9UJ98 1225 aa25.58■■□□□ 1.69
CCND1-203ENST00000536559 NPHP4O75161 1426 aaPredicted RBP25.57■■□□□ 1.68
CCND1-203ENST00000536559 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
CCND1-203ENST00000536559 NEURL4Q96JN8 1562 aa25.55■■□□□ 1.68
CCND1-203ENST00000536559 ADGRL2O95490 1459 aa25.54■■□□□ 1.68
CCND1-203ENST00000536559 MED14O60244 1454 aa25.53■■□□□ 1.68
CCND1-203ENST00000536559 EID1Q9Y6B2 187 aa25.53■■□□□ 1.68
CCND1-203ENST00000536559 CPS1P31327 1500 aa25.52■■□□□ 1.68
CCND1-203ENST00000536559 ANKRD50Q9ULJ7 1429 aa25.51■■□□□ 1.67
CCND1-203ENST00000536559 TXNDC2Q86VQ3 553 aa25.5■■□□□ 1.67
CCND1-203ENST00000536559 UBR1Q8IWV7 1749 aa25.49■■□□□ 1.67
CCND1-203ENST00000536559 IQGAP1P46940 1657 aa25.48■■□□□ 1.67
CCND1-203ENST00000536559 LMTK2Q8IWU2 1503 aa25.48■■□□□ 1.67
CCND1-203ENST00000536559 TOM1O60784 492 aa25.47■■□□□ 1.67
CCND1-203ENST00000536559 SCAF11Q99590 1463 aaKnown RBP25.45■■□□□ 1.66
CCND1-203ENST00000536559 VWDEQ8N2E2 1590 aa25.44■■□□□ 1.66
CCND1-203ENST00000536559 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
CCND1-203ENST00000536559 ITGAEP38570 1179 aa25.43■■□□□ 1.66
CCND1-203ENST00000536559 PPARGC1BQ86YN6 1023 aaKnown RBP25.43■■□□□ 1.66
CCND1-203ENST00000536559 SLC52A1Q9NWF4 448 aa25.43■■□□□ 1.66
CCND1-203ENST00000536559 IDI1Q13907 227 aa25.42■■□□□ 1.66
CCND1-203ENST00000536559 SLIT1O75093 1534 aa25.41■■□□□ 1.66
CCND1-203ENST00000536559 EFCAB6Q5THR3 1501 aa25.41■■□□□ 1.66
CCND1-203ENST00000536559 ROCK1Q13464 1354 aa25.41■■□□□ 1.66
CCND1-203ENST00000536559 LTKP29376 864 aa25.4■■□□□ 1.66
CCND1-203ENST00000536559 PIK3C2BO00750 1634 aa25.4■■□□□ 1.66
CCND1-203ENST00000536559 PIP4K2BP78356 416 aa25.39■■□□□ 1.66
CCND1-203ENST00000536559 DISP3Q9P2K9 1392 aa25.39■■□□□ 1.65
CCND1-203ENST00000536559 TMEM2Q9UHN6 1383 aa25.39■■□□□ 1.65
CCND1-203ENST00000536559 ARHGAP23Q9P227 1491 aa25.39■■□□□ 1.65
CCND1-203ENST00000536559 RPRD2Q5VT52 1461 aaKnown RBP25.38■■□□□ 1.65
CCND1-203ENST00000536559 NOS1P29475 1434 aa25.36■■□□□ 1.65
CCND1-203ENST00000536559 KDM5AP29375 1690 aaKnown RBP25.36■■□□□ 1.65
CCND1-203ENST00000536559 HDGFP51858 240 aaKnown RBP25.34■■□□□ 1.65
CCND1-203ENST00000536559 BCANQ96GW7 911 aa25.33■■□□□ 1.65
CCND1-203ENST00000536559 TET3O43151 1660 aa25.32■■□□□ 1.64
CCND1-203ENST00000536559 SYNMO15061 1565 aa25.31■■□□□ 1.64
CCND1-203ENST00000536559 ADGRB3O60242 1522 aa25.28■■□□□ 1.64
CCND1-203ENST00000536559 UNC13BO14795 1591 aa25.28■■□□□ 1.64
CCND1-203ENST00000536559 NUP155O75694 1391 aa25.28■■□□□ 1.64
CCND1-203ENST00000536559 LRRC7Q96NW7 1537 aa25.27■■□□□ 1.64
CCND1-203ENST00000536559 GCC2Q8IWJ2 1684 aa25.27■■□□□ 1.64
CCND1-203ENST00000536559 CHGAP10645 457 aaKnown RBP25.27■■□□□ 1.64
CCND1-203ENST00000536559 PPP1R15AO75807 674 aaPredicted RBP25.26■■□□□ 1.63
CCND1-203ENST00000536559 STRCP1A6NGW2 1772 aa25.24■■□□□ 1.63
CCND1-203ENST00000536559 HSPA1LP34931 641 aa25.24■■□□□ 1.63
CCND1-203ENST00000536559 SLC26A8Q96RN1 970 aa25.24■■□□□ 1.63
CCND1-203ENST00000536559 KCNA6P17658 529 aa25.21■■□□□ 1.63
CCND1-203ENST00000536559 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.21■■□□□ 1.63
CCND1-203ENST00000536559 IQGAP3Q86VI3 1631 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms