RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
KNTC1-208ENST00000535410 KDM5DQ9BY66 1539 aa18.32■□□□□ 0.52
KNTC1-208ENST00000535410 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
KNTC1-208ENST00000535410 PKD2Q13563 968 aa18.31■□□□□ 0.52
KNTC1-208ENST00000535410 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
KNTC1-208ENST00000535410 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
KNTC1-208ENST00000535410 PTPRTO14522 1441 aa18.31■□□□□ 0.52
KNTC1-208ENST00000535410 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
KNTC1-208ENST00000535410 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
KNTC1-208ENST00000535410 DUOX2Q9NRD8 1548 aa18.3■□□□□ 0.52
KNTC1-208ENST00000535410 FAM50AQ14320 339 aaKnown RBP18.29■□□□□ 0.52
KNTC1-208ENST00000535410 DAPK1P53355 1430 aa18.29■□□□□ 0.52
KNTC1-208ENST00000535410 PZPP20742 1482 aa18.28■□□□□ 0.52
KNTC1-208ENST00000535410 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
KNTC1-208ENST00000535410 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
KNTC1-208ENST00000535410 TNRQ92752 1358 aa18.28■□□□□ 0.52
KNTC1-208ENST00000535410 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
KNTC1-208ENST00000535410 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
KNTC1-208ENST00000535410 THEMISQ8N1K5 641 aaPredicted RBP18.26■□□□□ 0.51
KNTC1-208ENST00000535410 CHIC2Q9UKJ5 165 aa18.26■□□□□ 0.51
KNTC1-208ENST00000535410 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
KNTC1-208ENST00000535410 KANK1Q14678 1352 aa18.25■□□□□ 0.51
KNTC1-208ENST00000535410 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
KNTC1-208ENST00000535410 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
KNTC1-208ENST00000535410 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
KNTC1-208ENST00000535410 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
KNTC1-208ENST00000535410 RNF17Q9BXT8 1623 aaKnown RBP18.23■□□□□ 0.51
KNTC1-208ENST00000535410 STRCQ7RTU9 1775 aa18.22■□□□□ 0.51
KNTC1-208ENST00000535410 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
KNTC1-208ENST00000535410 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
KNTC1-208ENST00000535410 NLRP1Q9C000 1473 aa18.21■□□□□ 0.51
KNTC1-208ENST00000535410 MYO3AQ8NEV4 1616 aa18.21■□□□□ 0.51
KNTC1-208ENST00000535410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
KNTC1-208ENST00000535410 ABCC3O15438 1527 aa18.2■□□□□ 0.5
KNTC1-208ENST00000535410 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
KNTC1-208ENST00000535410 ZNF142P52746 1687 aaPredicted RBP18.19■□□□□ 0.5
KNTC1-208ENST00000535410 ZC3H13Q5T200 1668 aaKnown RBP18.19■□□□□ 0.5
KNTC1-208ENST00000535410 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
KNTC1-208ENST00000535410 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
KNTC1-208ENST00000535410 ADGRL2O95490 1459 aa18.15■□□□□ 0.5
KNTC1-208ENST00000535410 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
KNTC1-208ENST00000535410 ERVK-7P63135 1459 aa18.13■□□□□ 0.49
KNTC1-208ENST00000535410 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
KNTC1-208ENST00000535410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
KNTC1-208ENST00000535410 ANKRD50Q9ULJ7 1429 aa18.12■□□□□ 0.49
KNTC1-208ENST00000535410 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
KNTC1-208ENST00000535410 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
KNTC1-208ENST00000535410 ROCK1Q13464 1354 aa18.11■□□□□ 0.49
KNTC1-208ENST00000535410 STAG3Q9UJ98 1225 aa18.1■□□□□ 0.49
KNTC1-208ENST00000535410 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
KNTC1-208ENST00000535410 IQSEC2Q5JU85 1478 aa18.08■□□□□ 0.49
KNTC1-208ENST00000535410 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
KNTC1-208ENST00000535410 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
KNTC1-208ENST00000535410 DEPDC5O75140 1603 aa18.07■□□□□ 0.48
KNTC1-208ENST00000535410 LMTK2Q8IWU2 1503 aa18.07■□□□□ 0.48
KNTC1-208ENST00000535410 ITGAEP38570 1179 aa18.06■□□□□ 0.48
KNTC1-208ENST00000535410 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
KNTC1-208ENST00000535410 CEP152O94986 1710 aa18.05■□□□□ 0.48
KNTC1-208ENST00000535410 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
KNTC1-208ENST00000535410 NPHP4O75161 1426 aaPredicted RBP18.03■□□□□ 0.48
KNTC1-208ENST00000535410 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
KNTC1-208ENST00000535410 MED14O60244 1454 aa18.02■□□□□ 0.48
KNTC1-208ENST00000535410 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
KNTC1-208ENST00000535410 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
KNTC1-208ENST00000535410 IDI1Q13907 227 aa18.01■□□□□ 0.47
KNTC1-208ENST00000535410 HDGFP51858 240 aaKnown RBP18■□□□□ 0.47
KNTC1-208ENST00000535410 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
KNTC1-208ENST00000535410 CFAP65Q6ZU64 1925 aaKnown RBP17.98■□□□□ 0.47
KNTC1-208ENST00000535410 EFCAB6Q5THR3 1501 aa17.98■□□□□ 0.47
KNTC1-208ENST00000535410 NOS1P29475 1434 aa17.98■□□□□ 0.47
KNTC1-208ENST00000535410 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
KNTC1-208ENST00000535410 TMEM2Q9UHN6 1383 aa17.97■□□□□ 0.47
KNTC1-208ENST00000535410 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
KNTC1-208ENST00000535410 CPS1P31327 1500 aa17.97■□□□□ 0.47
KNTC1-208ENST00000535410 NEURL4Q96JN8 1562 aa17.96■□□□□ 0.47
KNTC1-208ENST00000535410 NUP155O75694 1391 aa17.96■□□□□ 0.47
KNTC1-208ENST00000535410 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
KNTC1-208ENST00000535410 SLIT1O75093 1534 aa17.95■□□□□ 0.46
KNTC1-208ENST00000535410 TOM1O60784 492 aa17.95■□□□□ 0.46
KNTC1-208ENST00000535410 LTKP29376 864 aa17.95■□□□□ 0.46
KNTC1-208ENST00000535410 ARHGAP23Q9P227 1491 aa17.94■□□□□ 0.46
KNTC1-208ENST00000535410 UBR1Q8IWV7 1749 aa17.93■□□□□ 0.46
KNTC1-208ENST00000535410 TET3O43151 1660 aa17.91■□□□□ 0.46
KNTC1-208ENST00000535410 IQGAP1P46940 1657 aa17.91■□□□□ 0.46
KNTC1-208ENST00000535410 UNC13BO14795 1591 aa17.91■□□□□ 0.46
KNTC1-208ENST00000535410 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
KNTC1-208ENST00000535410 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
KNTC1-208ENST00000535410 BCANQ96GW7 911 aa17.89■□□□□ 0.45
KNTC1-208ENST00000535410 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
KNTC1-208ENST00000535410 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
KNTC1-208ENST00000535410 CHGAP10645 457 aaKnown RBP17.88■□□□□ 0.45
KNTC1-208ENST00000535410 SYNMO15061 1565 aa17.87■□□□□ 0.45
KNTC1-208ENST00000535410 GCC2Q8IWJ2 1684 aa17.86■□□□□ 0.45
KNTC1-208ENST00000535410 ADGRB3O60242 1522 aa17.85■□□□□ 0.45
KNTC1-208ENST00000535410 IQGAP3Q86VI3 1631 aa17.85■□□□□ 0.45
KNTC1-208ENST00000535410 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
KNTC1-208ENST00000535410 KCNA6P17658 529 aa17.83■□□□□ 0.44
KNTC1-208ENST00000535410 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
KNTC1-208ENST00000535410 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
KNTC1-208ENST00000535410 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms