RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 HRO43593 1189 aa7.95□□□□□ -1.14
SNHG1-201ENST00000535076 DDX12PQ92771 950 aa7.95□□□□□ -1.14
SNHG1-201ENST00000535076 PHF14O94880 888 aa7.94□□□□□ -1.14
SNHG1-201ENST00000535076 COL9A1P20849 921 aa7.94□□□□□ -1.14
SNHG1-201ENST00000535076 KCNV2Q8TDN2 545 aa7.94□□□□□ -1.14
SNHG1-201ENST00000535076 MYT1LQ9UL68 1186 aa7.94□□□□□ -1.14
SNHG1-201ENST00000535076 PTGER2P43116 358 aa7.93□□□□□ -1.14
SNHG1-201ENST00000535076 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-201ENST00000535076 ANP32EQ9BTT0 268 aa7.93□□□□□ -1.14
SNHG1-201ENST00000535076 WDR70Q9NW82 654 aa7.93□□□□□ -1.14
SNHG1-201ENST00000535076 TK2O00142 265 aa7.92□□□□□ -1.14
SNHG1-201ENST00000535076 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
SNHG1-201ENST00000535076 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
SNHG1-201ENST00000535076 VPS9D1Q9Y2B5 631 aa7.92□□□□□ -1.14
SNHG1-201ENST00000535076 PTPREP23469 700 aa7.9□□□□□ -1.14
SNHG1-201ENST00000535076 RBM33Q96EV2 1170 aaKnown RBP7.9□□□□□ -1.14
SNHG1-201ENST00000535076 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-201ENST00000535076 PROX2Q3B8N5 592 aa7.89□□□□□ -1.15
SNHG1-201ENST00000535076 NBR1Q14596 966 aa7.88□□□□□ -1.15
SNHG1-201ENST00000535076 TSR1Q2NL82 804 aaKnown RBP7.88□□□□□ -1.15
SNHG1-201ENST00000535076 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
SNHG1-201ENST00000535076 FBXW7Q969H0 707 aa7.88□□□□□ -1.15
SNHG1-201ENST00000535076 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
SNHG1-201ENST00000535076 KDM2AQ9Y2K7 1162 aa7.88□□□□□ -1.15
SNHG1-201ENST00000535076 BHMG1C9JSJ3 638 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-201ENST00000535076 EN1Q05925 392 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-201ENST00000535076 EPAS1Q99814 870 aa7.87□□□□□ -1.15
SNHG1-201ENST00000535076 GRXCR2A6NFK2 248 aa7.86□□□□□ -1.15
SNHG1-201ENST00000535076 PPP1R3GB7ZBB8 358 aa7.86□□□□□ -1.15
SNHG1-201ENST00000535076 HOMEZQ8IX15 550 aa7.86□□□□□ -1.15
SNHG1-201ENST00000535076 PODXL2Q9NZ53 605 aa7.86□□□□□ -1.15
SNHG1-201ENST00000535076 OSBPP22059 807 aa7.85□□□□□ -1.15
SNHG1-201ENST00000535076 MLLT3P42568 568 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-201ENST00000535076 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-201ENST00000535076 KCNH8Q96L42 1107 aa7.84□□□□□ -1.15
SNHG1-201ENST00000535076 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.15
SNHG1-201ENST00000535076 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
SNHG1-201ENST00000535076 ACIN1Q9UKV3 1341 aaKnown RBP7.82□□□□□ -1.16
SNHG1-201ENST00000535076 MAP3K7O43318 606 aa7.82□□□□□ -1.16
SNHG1-201ENST00000535076 C3orf80F5H4A9 247 aa7.81□□□□□ -1.16
SNHG1-201ENST00000535076 FAM198AQ9UFP1 575 aa7.81□□□□□ -1.16
SNHG1-201ENST00000535076 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
SNHG1-201ENST00000535076 KIAA1468Q9P260 1216 aa7.79□□□□□ -1.16
SNHG1-201ENST00000535076 TSKSQ9UJT2 592 aa7.79□□□□□ -1.16
SNHG1-201ENST00000535076 SEMA3EO15041 775 aa7.78□□□□□ -1.16
SNHG1-201ENST00000535076 ZEB1P37275 1124 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-201ENST00000535076 ERICH6BQ5W0A0 696 aa7.78□□□□□ -1.16
SNHG1-201ENST00000535076 RABGEF1Q9UJ41 708 aa7.78□□□□□ -1.16
SNHG1-201ENST00000535076 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
SNHG1-201ENST00000535076 NEFLP07196 543 aa7.77□□□□□ -1.17
SNHG1-201ENST00000535076 NPDC1Q9NQX5 325 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-201ENST00000535076 SEPT9Q9UHD8 586 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-201ENST00000535076 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
SNHG1-201ENST00000535076 MRPL50Q8N5N7 158 aaKnown RBP7.75□□□□□ -1.17
SNHG1-201ENST00000535076 PRSS12P56730 875 aa7.74□□□□□ -1.17
SNHG1-201ENST00000535076 THSD4Q6ZMP0 1018 aa7.74□□□□□ -1.17
SNHG1-201ENST00000535076 P3H3Q8IVL6 736 aa7.74□□□□□ -1.17
SNHG1-201ENST00000535076 CDCA7LQ96GN5 454 aa7.74□□□□□ -1.17
SNHG1-201ENST00000535076 PKNOX2Q96KN3 472 aa7.74□□□□□ -1.17
SNHG1-201ENST00000535076 SMAPO00193 183 aa7.73□□□□□ -1.17
SNHG1-201ENST00000535076 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-201ENST00000535076 NBPF3Q9H094 633 aa7.73□□□□□ -1.17
SNHG1-201ENST00000535076 TTC13Q8NBP0 860 aa7.72□□□□□ -1.17
SNHG1-201ENST00000535076 WNT2BQ93097 391 aa7.72□□□□□ -1.17
SNHG1-201ENST00000535076 STAC3Q96MF2 364 aa7.72□□□□□ -1.17
SNHG1-201ENST00000535076 HCSTQ9UBK5 93 aa7.72□□□□□ -1.17
SNHG1-201ENST00000535076 TESPA1A2RU30 521 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-201ENST00000535076 BCAMP50895 628 aa7.71□□□□□ -1.18
SNHG1-201ENST00000535076 PTPN5P54829 565 aa7.71□□□□□ -1.18
SNHG1-201ENST00000535076 PADI6Q6TGC4 694 aa7.7□□□□□ -1.18
SNHG1-201ENST00000535076 ZFRQ96KR1 1074 aaKnown RBP7.7□□□□□ -1.18
SNHG1-201ENST00000535076 PDIA4P13667 645 aaKnown RBP7.69□□□□□ -1.18
SNHG1-201ENST00000535076 LAPTM4BQ86VI4 370 aa7.69□□□□□ -1.18
SNHG1-201ENST00000535076 GOLGA8CPA6NN73 597 aa7.68□□□□□ -1.18
SNHG1-201ENST00000535076 PTGDRQ13258 359 aa7.68□□□□□ -1.18
SNHG1-201ENST00000535076 FAM98CQ17RN3 349 aaKnown RBP7.68□□□□□ -1.18
SNHG1-201ENST00000535076 RBM26Q5T8P6 1007 aaKnown RBP7.67□□□□□ -1.18
SNHG1-201ENST00000535076 VSIG10Q8N0Z9 540 aa7.67□□□□□ -1.18
SNHG1-201ENST00000535076 CERKQ8TCT0 537 aa7.67□□□□□ -1.18
SNHG1-201ENST00000535076 TATDN2Q93075 761 aa7.67□□□□□ -1.18
SNHG1-201ENST00000535076 SOWAHBA6NEL2 793 aa7.66□□□□□ -1.18
SNHG1-201ENST00000535076 GPR37O15354 613 aa7.66□□□□□ -1.18
SNHG1-201ENST00000535076 PACS2Q86VP3 889 aa7.66□□□□□ -1.18
SNHG1-201ENST00000535076 ANKK1Q8NFD2 765 aa7.66□□□□□ -1.18
SNHG1-201ENST00000535076 NUDT18Q6ZVK8 323 aa7.65□□□□□ -1.18
SNHG1-201ENST00000535076 RBM27Q9P2N5 1060 aaKnown RBP7.65□□□□□ -1.18
SNHG1-201ENST00000535076 PNMA3Q9UL41 463 aa7.65□□□□□ -1.18
SNHG1-201ENST00000535076 CLSPNQ9HAW4 1339 aa7.64□□□□□ -1.19
SNHG1-201ENST00000535076 NUTM2FA1L443 756 aa7.64□□□□□ -1.19
SNHG1-201ENST00000535076 FAM161AQ3B820 660 aa7.64□□□□□ -1.19
SNHG1-201ENST00000535076 WBP1LQ9NX94 342 aa7.64□□□□□ -1.19
SNHG1-201ENST00000535076 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
SNHG1-201ENST00000535076 GTF3C3Q9Y5Q9 886 aa7.64□□□□□ -1.19
SNHG1-201ENST00000535076 SAMD7Q7Z3H4 446 aa7.63□□□□□ -1.19
SNHG1-201ENST00000535076 NBPF26B4DH59 902 aa7.62□□□□□ -1.19
SNHG1-201ENST00000535076 PDE4CQ08493 712 aa7.62□□□□□ -1.19
SNHG1-201ENST00000535076 EYA1Q99502 592 aa7.62□□□□□ -1.19
SNHG1-201ENST00000535076 TULP1O00294 542 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-201ENST00000535076 FECHP22830 423 aa7.61□□□□□ -1.19
SNHG1-201ENST00000535076 HPS5Q9UPZ3 1129 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms