RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 AGLP35573 1532 aa17.62■□□□□ 0.41
TNC-209ENST00000534839 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
TNC-209ENST00000534839 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
TNC-209ENST00000534839 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
TNC-209ENST00000534839 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
TNC-209ENST00000534839 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
TNC-209ENST00000534839 ZNF142P52746 1687 aaPredicted RBP17.6■□□□□ 0.41
TNC-209ENST00000534839 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
TNC-209ENST00000534839 VASPP50552 380 aaPredicted RBP17.58■□□□□ 0.4
TNC-209ENST00000534839 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.4
TNC-209ENST00000534839 CEP170BQ9Y4F5 1589 aaPredicted RBP17.57■□□□□ 0.4
TNC-209ENST00000534839 PRKAR2AP13861 404 aaKnown RBP17.57■□□□□ 0.4
TNC-209ENST00000534839 PLCH2O75038 1416 aa17.56■□□□□ 0.4
TNC-209ENST00000534839 MYT1LQ9UL68 1186 aa17.56■□□□□ 0.4
TNC-209ENST00000534839 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
TNC-209ENST00000534839 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
TNC-209ENST00000534839 MIER1Q8N108 512 aa17.54■□□□□ 0.4
TNC-209ENST00000534839 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
TNC-209ENST00000534839 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
TNC-209ENST00000534839 KDM5CP41229 1560 aa17.53■□□□□ 0.4
TNC-209ENST00000534839 MROH2AA6NES4 1674 aa17.52■□□□□ 0.4
TNC-209ENST00000534839 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
TNC-209ENST00000534839 NEURL4Q96JN8 1562 aa17.51■□□□□ 0.39
TNC-209ENST00000534839 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
TNC-209ENST00000534839 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
TNC-209ENST00000534839 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
TNC-209ENST00000534839 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
TNC-209ENST00000534839 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
TNC-209ENST00000534839 LRRC7Q96NW7 1537 aa17.44■□□□□ 0.38
TNC-209ENST00000534839 MNX1P50219 401 aaPredicted RBP17.44■□□□□ 0.38
TNC-209ENST00000534839 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
TNC-209ENST00000534839 SAMD9Q5K651 1589 aa17.43■□□□□ 0.38
TNC-209ENST00000534839 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
TNC-209ENST00000534839 POTEHQ6S545 545 aa17.41■□□□□ 0.38
TNC-209ENST00000534839 IFNLR1Q8IU57 520 aaPredicted RBP17.41■□□□□ 0.38
TNC-209ENST00000534839 A2ML1A8K2U0 1454 aa17.41■□□□□ 0.38
TNC-209ENST00000534839 CLTCQ00610 1675 aaKnown RBP17.39■□□□□ 0.37
TNC-209ENST00000534839 STRCP1A6NGW2 1772 aa17.39■□□□□ 0.37
TNC-209ENST00000534839 FARP1Q9Y4F1 1045 aaPredicted RBP17.38■□□□□ 0.37
TNC-209ENST00000534839 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
TNC-209ENST00000534839 SYNMO15061 1565 aa17.33■□□□□ 0.37
TNC-209ENST00000534839 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
TNC-209ENST00000534839 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
TNC-209ENST00000534839 ANKLE2Q86XL3 938 aa17.32■□□□□ 0.36
TNC-209ENST00000534839 ARHGAP5Q13017 1502 aa17.31■□□□□ 0.36
TNC-209ENST00000534839 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
TNC-209ENST00000534839 KIDINS220Q9ULH0 1771 aa17.31■□□□□ 0.36
TNC-209ENST00000534839 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
TNC-209ENST00000534839 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
TNC-209ENST00000534839 MED14O60244 1454 aa17.3■□□□□ 0.36
TNC-209ENST00000534839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
TNC-209ENST00000534839 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
TNC-209ENST00000534839 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.35
TNC-209ENST00000534839 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
TNC-209ENST00000534839 IQGAP1P46940 1657 aa17.24■□□□□ 0.35
TNC-209ENST00000534839 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
TNC-209ENST00000534839 ABCC1P33527 1531 aa17.24■□□□□ 0.35
TNC-209ENST00000534839 KIF14Q15058 1648 aa17.24■□□□□ 0.35
TNC-209ENST00000534839 RXRBP28702 533 aa17.23■□□□□ 0.35
TNC-209ENST00000534839 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
TNC-209ENST00000534839 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
TNC-209ENST00000534839 XIRP1Q702N8 1843 aaKnown RBP17.21■□□□□ 0.35
TNC-209ENST00000534839 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
TNC-209ENST00000534839 GGT6Q6P531 493 aa17.21■□□□□ 0.35
TNC-209ENST00000534839 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
TNC-209ENST00000534839 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
TNC-209ENST00000534839 LRP6O75581 1613 aa17.2■□□□□ 0.34
TNC-209ENST00000534839 CDK12Q9NYV4 1490 aaPredicted RBP17.19■□□□□ 0.34
TNC-209ENST00000534839 TNRQ92752 1358 aa17.19■□□□□ 0.34
TNC-209ENST00000534839 JCADQ9P266 1359 aa17.19■□□□□ 0.34
TNC-209ENST00000534839 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
TNC-209ENST00000534839 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
TNC-209ENST00000534839 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
TNC-209ENST00000534839 CDC42BPBQ9Y5S2 1711 aa17.17■□□□□ 0.34
TNC-209ENST00000534839 NUBP1P53384 320 aa17.16■□□□□ 0.34
TNC-209ENST00000534839 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
TNC-209ENST00000534839 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
TNC-209ENST00000534839 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
TNC-209ENST00000534839 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
TNC-209ENST00000534839 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
TNC-209ENST00000534839 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
TNC-209ENST00000534839 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
TNC-209ENST00000534839 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
TNC-209ENST00000534839 ZC3H13Q5T200 1668 aaKnown RBP17.12■□□□□ 0.33
TNC-209ENST00000534839 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
TNC-209ENST00000534839 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
TNC-209ENST00000534839 EVX2Q03828 476 aa17.11■□□□□ 0.33
TNC-209ENST00000534839 HAX1O00165 279 aa17.1■□□□□ 0.33
TNC-209ENST00000534839 A2MP01023 1474 aa17.1■□□□□ 0.33
TNC-209ENST00000534839 RGS12O14924 1447 aa17.09■□□□□ 0.33
TNC-209ENST00000534839 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
TNC-209ENST00000534839 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
TNC-209ENST00000534839 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
TNC-209ENST00000534839 NUTM2DQ5VT03 806 aaPredicted RBP17.08■□□□□ 0.32
TNC-209ENST00000534839 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
TNC-209ENST00000534839 KDM5DQ9BY66 1539 aa17.07■□□□□ 0.32
TNC-209ENST00000534839 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
TNC-209ENST00000534839 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
TNC-209ENST00000534839 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
TNC-209ENST00000534839 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms