RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
NCAPD3-214ENST00000534548 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
NCAPD3-214ENST00000534548 EPRSP07814 1512 aaKnown RBP12.97□□□□□ -0.33
NCAPD3-214ENST00000534548 A0A0U1RQG5 324 aaPredicted RBP12.96□□□□□ -0.33
NCAPD3-214ENST00000534548 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
NCAPD3-214ENST00000534548 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.34
NCAPD3-214ENST00000534548 CRBNQ96SW2 442 aa12.96□□□□□ -0.34
NCAPD3-214ENST00000534548 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
NCAPD3-214ENST00000534548 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
NCAPD3-214ENST00000534548 UGGT2Q9NYU1 1516 aa12.95□□□□□ -0.34
NCAPD3-214ENST00000534548 FAM13BQ9NYF5 915 aa12.94□□□□□ -0.34
NCAPD3-214ENST00000534548 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
NCAPD3-214ENST00000534548 FRAT2O75474 233 aaPredicted RBP12.94□□□□□ -0.34
NCAPD3-214ENST00000534548 KDM6BO15054 1643 aa12.93□□□□□ -0.34
NCAPD3-214ENST00000534548 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
NCAPD3-214ENST00000534548 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
NCAPD3-214ENST00000534548 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
NCAPD3-214ENST00000534548 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
NCAPD3-214ENST00000534548 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
NCAPD3-214ENST00000534548 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
NCAPD3-214ENST00000534548 SAMD9Q5K651 1589 aa12.9□□□□□ -0.34
NCAPD3-214ENST00000534548 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
NCAPD3-214ENST00000534548 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
NCAPD3-214ENST00000534548 DAPK1P53355 1430 aa12.9□□□□□ -0.34
NCAPD3-214ENST00000534548 LAMC3Q9Y6N6 1575 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 TMF1P82094 1093 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 USP47Q96K76 1375 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 ABCC5O15440 1437 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 HECW1Q76N89 1606 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
NCAPD3-214ENST00000534548 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 NUP155O75694 1391 aa12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 IQGAP2Q13576 1575 aa12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 RRP9O43818 475 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-214ENST00000534548 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
NCAPD3-214ENST00000534548 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
NCAPD3-214ENST00000534548 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
NCAPD3-214ENST00000534548 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
NCAPD3-214ENST00000534548 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
NCAPD3-214ENST00000534548 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
NCAPD3-214ENST00000534548 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
NCAPD3-214ENST00000534548 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
NCAPD3-214ENST00000534548 MRE11P49959 708 aa12.86□□□□□ -0.35
NCAPD3-214ENST00000534548 TPM2P07951 284 aa12.86□□□□□ -0.35
NCAPD3-214ENST00000534548 HNRNPMP52272 730 aaKnown RBP eCLIP12.86□□□□□ -0.352e-6■■■■□ 20.3
NCAPD3-214ENST00000534548 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 ROCK2O75116 1388 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-214ENST00000534548 ZRSR1Q15695 479 aaKnown RBP12.84□□□□□ -0.35
NCAPD3-214ENST00000534548 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
NCAPD3-214ENST00000534548 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
NCAPD3-214ENST00000534548 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
NCAPD3-214ENST00000534548 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
NCAPD3-214ENST00000534548 MAP7D2Q96T17 732 aa12.82□□□□□ -0.36
NCAPD3-214ENST00000534548 ANKRD30AQ9BXX3 1397 aa12.82□□□□□ -0.36
NCAPD3-214ENST00000534548 NPM1P06748 294 aaKnown RBP eCLIP12.81□□□□□ -0.36
NCAPD3-214ENST00000534548 R3HCC1Q9Y3T6 440 aaKnown RBP12.81□□□□□ -0.36
NCAPD3-214ENST00000534548 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
NCAPD3-214ENST00000534548 ROCK1Q13464 1354 aa12.8□□□□□ -0.36
NCAPD3-214ENST00000534548 CFAP44Q96MT7 982 aa12.8□□□□□ -0.36
NCAPD3-214ENST00000534548 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
NCAPD3-214ENST00000534548 CENPJQ9HC77 1338 aaPredicted RBP12.8□□□□□ -0.36
NCAPD3-214ENST00000534548 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
NCAPD3-214ENST00000534548 PLB1Q6P1J6 1458 aa12.8□□□□□ -0.36
NCAPD3-214ENST00000534548 CSPP1Q1MSJ5 1256 aa12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 ZNF771Q7L3S4 317 aaPredicted RBP12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 ZMYND15Q9H091 742 aa12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 WDR62O43379 1518 aa12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 NRDCO43847 1150 aa12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
NCAPD3-214ENST00000534548 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 GOLGA6L4A6NEF3 574 aa12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 TRAK2O60296 914 aa12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
NCAPD3-214ENST00000534548 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.36
NCAPD3-214ENST00000534548 KIAA1107Q9UPP5 1409 aa12.77□□□□□ -0.36
NCAPD3-214ENST00000534548 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
NCAPD3-214ENST00000534548 GCC2Q8IWJ2 1684 aa12.76□□□□□ -0.37
NCAPD3-214ENST00000534548 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
NCAPD3-214ENST00000534548 MCCP23508 829 aa12.76□□□□□ -0.37
NCAPD3-214ENST00000534548 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
NCAPD3-214ENST00000534548 TARBP1Q13395 1621 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms