RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 AXIN2Q9Y2T1 843 aa9.96□□□□□ -0.82
ATPAF1-211ENST00000534216 EN1Q05925 392 aaPredicted RBP9.95□□□□□ -0.82
ATPAF1-211ENST00000534216 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
ATPAF1-211ENST00000534216 PTPREP23469 700 aa9.94□□□□□ -0.82
ATPAF1-211ENST00000534216 KCNK17Q96T54 332 aa9.94□□□□□ -0.82
ATPAF1-211ENST00000534216 MAP3K7O43318 606 aa9.93□□□□□ -0.82
ATPAF1-211ENST00000534216 PSEN2P49810 448 aa9.93□□□□□ -0.82
ATPAF1-211ENST00000534216 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
ATPAF1-211ENST00000534216 KCNH8Q96L42 1107 aa9.92□□□□□ -0.82
ATPAF1-211ENST00000534216 SMYD5Q6GMV2 418 aa9.91□□□□□ -0.82
ATPAF1-211ENST00000534216 LSM11P83369 360 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATPAF1-211ENST00000534216 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.82
ATPAF1-211ENST00000534216 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
ATPAF1-211ENST00000534216 PPP1R3GB7ZBB8 358 aa9.88□□□□□ -0.83
ATPAF1-211ENST00000534216 COL9A1P20849 921 aa9.88□□□□□ -0.83
ATPAF1-211ENST00000534216 RBM26Q5T8P6 1007 aaKnown RBP9.86□□□□□ -0.83
ATPAF1-211ENST00000534216 CDHR5Q9HBB8 845 aa9.86□□□□□ -0.83
ATPAF1-211ENST00000534216 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
ATPAF1-211ENST00000534216 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
ATPAF1-211ENST00000534216 TK2O00142 265 aa9.84□□□□□ -0.83
ATPAF1-211ENST00000534216 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
ATPAF1-211ENST00000534216 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
ATPAF1-211ENST00000534216 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
ATPAF1-211ENST00000534216 BCANQ96GW7 911 aa9.83□□□□□ -0.84
ATPAF1-211ENST00000534216 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
ATPAF1-211ENST00000534216 ADGRD1Q6QNK2 874 aa9.82□□□□□ -0.84
ATPAF1-211ENST00000534216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATPAF1-211ENST00000534216 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
ATPAF1-211ENST00000534216 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
ATPAF1-211ENST00000534216 PTGDRQ13258 359 aa9.8□□□□□ -0.84
ATPAF1-211ENST00000534216 PROX2Q3B8N5 592 aa9.8□□□□□ -0.84
ATPAF1-211ENST00000534216 PRSS12P56730 875 aa9.78□□□□□ -0.84
ATPAF1-211ENST00000534216 CDCA7LQ96GN5 454 aa9.78□□□□□ -0.84
ATPAF1-211ENST00000534216 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
ATPAF1-211ENST00000534216 HRO43593 1189 aa9.77□□□□□ -0.85
ATPAF1-211ENST00000534216 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
ATPAF1-211ENST00000534216 FCHSD2O94868 740 aa9.77□□□□□ -0.85
ATPAF1-211ENST00000534216 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
ATPAF1-211ENST00000534216 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
ATPAF1-211ENST00000534216 GPR37O15354 613 aa9.76□□□□□ -0.85
ATPAF1-211ENST00000534216 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
ATPAF1-211ENST00000534216 TSKSQ9UJT2 592 aa9.76□□□□□ -0.85
ATPAF1-211ENST00000534216 RABGEF1Q9UJ41 708 aa9.75□□□□□ -0.85
ATPAF1-211ENST00000534216 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
ATPAF1-211ENST00000534216 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
ATPAF1-211ENST00000534216 KIAA1468Q9P260 1216 aa9.74□□□□□ -0.85
ATPAF1-211ENST00000534216 FAM198AQ9UFP1 575 aa9.74□□□□□ -0.85
ATPAF1-211ENST00000534216 HIC1Q14526 733 aa9.73□□□□□ -0.85
ATPAF1-211ENST00000534216 PADI6Q6TGC4 694 aa9.73□□□□□ -0.85
ATPAF1-211ENST00000534216 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
ATPAF1-211ENST00000534216 NBPF3Q9H094 633 aa9.71□□□□□ -0.86
ATPAF1-211ENST00000534216 GNPATO15228 680 aa9.7□□□□□ -0.86
ATPAF1-211ENST00000534216 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
ATPAF1-211ENST00000534216 STAC3Q96MF2 364 aa9.69□□□□□ -0.86
ATPAF1-211ENST00000534216 FECHP22830 423 aa9.68□□□□□ -0.86
ATPAF1-211ENST00000534216 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
ATPAF1-211ENST00000534216 MYT1LQ9UL68 1186 aa9.68□□□□□ -0.86
ATPAF1-211ENST00000534216 NBPF26B4DH59 902 aa9.67□□□□□ -0.86
ATPAF1-211ENST00000534216 LAPTM4BQ86VI4 370 aa9.67□□□□□ -0.86
ATPAF1-211ENST00000534216 TATDN2Q93075 761 aa9.67□□□□□ -0.86
ATPAF1-211ENST00000534216 SEPT9Q9UHD8 586 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-211ENST00000534216 ZC3H15Q8WU90 426 aaKnown RBP9.66□□□□□ -0.86
ATPAF1-211ENST00000534216 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
ATPAF1-211ENST00000534216 SMAPO00193 183 aa9.65□□□□□ -0.86
ATPAF1-211ENST00000534216 NUDT18Q6ZVK8 323 aa9.65□□□□□ -0.86
ATPAF1-211ENST00000534216 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
ATPAF1-211ENST00000534216 FAM98CQ17RN3 349 aaKnown RBP9.64□□□□□ -0.87
ATPAF1-211ENST00000534216 FAM161AQ3B820 660 aa9.63□□□□□ -0.87
ATPAF1-211ENST00000534216 EYA1Q99502 592 aa9.63□□□□□ -0.87
ATPAF1-211ENST00000534216 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
ATPAF1-211ENST00000534216 ZMYND10O75800 440 aa9.62□□□□□ -0.87
ATPAF1-211ENST00000534216 RNF166Q96A37 237 aaPredicted RBP9.62□□□□□ -0.87
ATPAF1-211ENST00000534216 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
ATPAF1-211ENST00000534216 OATP04181 439 aa9.6□□□□□ -0.87
ATPAF1-211ENST00000534216 MAP2K5Q13163 448 aa9.6□□□□□ -0.87
ATPAF1-211ENST00000534216 BARGINQ6ZT62 677 aa9.6□□□□□ -0.87
ATPAF1-211ENST00000534216 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
ATPAF1-211ENST00000534216 KCTD12Q96CX2 325 aaKnown RBP9.6□□□□□ -0.87
ATPAF1-211ENST00000534216 MINK1Q8N4C8 1332 aaPredicted RBP9.59□□□□□ -0.87
ATPAF1-211ENST00000534216 WNT2BQ93097 391 aa9.59□□□□□ -0.87
ATPAF1-211ENST00000534216 IRF6O14896 467 aa9.58□□□□□ -0.88
ATPAF1-211ENST00000534216 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
ATPAF1-211ENST00000534216 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
ATPAF1-211ENST00000534216 PXYLP1Q8TE99 480 aa9.58□□□□□ -0.88
ATPAF1-211ENST00000534216 RCCD1A6NED2 376 aa9.55□□□□□ -0.88
ATPAF1-211ENST00000534216 DNAJB2P25686 324 aa9.55□□□□□ -0.88
ATPAF1-211ENST00000534216 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
ATPAF1-211ENST00000534216 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
ATPAF1-211ENST00000534216 KRI1Q8N9T8 703 aaKnown RBP9.55□□□□□ -0.88
ATPAF1-211ENST00000534216 SOWAHBA6NEL2 793 aa9.54□□□□□ -0.88
ATPAF1-211ENST00000534216 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
ATPAF1-211ENST00000534216 LRCH3Q96II8 777 aa9.54□□□□□ -0.88
ATPAF1-211ENST00000534216 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.54□□□□□ -0.88
ATPAF1-211ENST00000534216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
ATPAF1-211ENST00000534216 BCAMP50895 628 aa9.53□□□□□ -0.88
ATPAF1-211ENST00000534216 PHOX2BQ99453 314 aa9.53□□□□□ -0.88
ATPAF1-211ENST00000534216 TMEM134Q9H6X4 195 aa9.53□□□□□ -0.88
ATPAF1-211ENST00000534216 HDGFP51858 240 aaKnown RBP9.52□□□□□ -0.89
ATPAF1-211ENST00000534216 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.89
ATPAF1-211ENST00000534216 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms