RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 RNF17Q9BXT8 1623 aaKnown RBP33.68■■■□□ 2.98
VPS51-214ENST00000534124 EIF2AK4Q9P2K8 1649 aaKnown RBP33.68■■■□□ 2.98
VPS51-214ENST00000534124 CROCC2H7BZ55 1655 aa33.68■■■□□ 2.98
VPS51-214ENST00000534124 PTPRTO14522 1441 aa33.68■■■□□ 2.98
VPS51-214ENST00000534124 KIF3BO15066 747 aa33.66■■■□□ 2.98
VPS51-214ENST00000534124 APLP2Q06481 763 aa33.65■■■□□ 2.98
VPS51-214ENST00000534124 PTPN23Q9H3S7 1636 aa33.64■■■□□ 2.98
VPS51-214ENST00000534124 ZC3H13Q5T200 1668 aaKnown RBP33.63■■■□□ 2.97
VPS51-214ENST00000534124 PZPP20742 1482 aa33.61■■■□□ 2.97
VPS51-214ENST00000534124 PLA2R1Q13018 1463 aa33.6■■■□□ 2.97
VPS51-214ENST00000534124 SHANK2Q9UPX8 1470 aa33.6■■■□□ 2.97
VPS51-214ENST00000534124 CERKQ8TCT0 537 aa33.59■■■□□ 2.97
VPS51-214ENST00000534124 A2ML1A8K2U0 1454 aa33.56■■■□□ 2.96
VPS51-214ENST00000534124 DUOX2Q9NRD8 1548 aa33.55■■■□□ 2.96
VPS51-214ENST00000534124 DNMT1P26358 1616 aaKnown RBP33.55■■■□□ 2.96
VPS51-214ENST00000534124 FGD6Q6ZV73 1430 aa33.53■■■□□ 2.96
VPS51-214ENST00000534124 MROH1Q8NDA8 1641 aa33.53■■■□□ 2.96
VPS51-214ENST00000534124 WASHC2CQ9Y4E1 1318 aa33.53■■■□□ 2.96
VPS51-214ENST00000534124 TCOF1Q13428 1488 aaKnown RBP33.52■■■□□ 2.96
VPS51-214ENST00000534124 ABCC3O15438 1527 aa33.51■■■□□ 2.95
VPS51-214ENST00000534124 TNRQ92752 1358 aa33.49■■■□□ 2.95
VPS51-214ENST00000534124 ABCC5O15440 1437 aa33.47■■■□□ 2.95
VPS51-214ENST00000534124 POLR1AO95602 1720 aaPredicted RBP33.47■■■□□ 2.95
VPS51-214ENST00000534124 LTBP4Q8N2S1 1624 aa33.46■■■□□ 2.95
VPS51-214ENST00000534124 CEP152O94986 1710 aa33.46■■■□□ 2.95
VPS51-214ENST00000534124 DAPK1P53355 1430 aa33.45■■■□□ 2.95
VPS51-214ENST00000534124 PRDM15P57071 1507 aaPredicted RBP33.43■■■□□ 2.94
VPS51-214ENST00000534124 PKD2Q13563 968 aa33.43■■■□□ 2.94
VPS51-214ENST00000534124 KIF15Q9NS87 1388 aa33.43■■■□□ 2.94
VPS51-214ENST00000534124 ERBINQ96RT1 1412 aa33.43■■■□□ 2.94
VPS51-214ENST00000534124 NLRP1Q9C000 1473 aa33.43■■■□□ 2.94
VPS51-214ENST00000534124 FBXO31Q5XUX0 539 aaPredicted RBP33.41■■■□□ 2.94
VPS51-214ENST00000534124 DEPDC5O75140 1603 aa33.4■■■□□ 2.94
VPS51-214ENST00000534124 SPATA31D1Q6ZQQ2 1576 aa33.4■■■□□ 2.94
VPS51-214ENST00000534124 IQSEC2Q5JU85 1478 aa33.38■■■□□ 2.93
VPS51-214ENST00000534124 NCKAP5LQ9HCH0 1330 aa33.38■■■□□ 2.93
VPS51-214ENST00000534124 NEURL4Q96JN8 1562 aa33.34■■■□□ 2.93
VPS51-214ENST00000534124 UGGT1Q9NYU2 1555 aa33.34■■■□□ 2.93
VPS51-214ENST00000534124 ERVK-7P63135 1459 aa33.33■■■□□ 2.93
VPS51-214ENST00000534124 ANKRD30AQ9BXX3 1397 aa33.29■■■□□ 2.92
VPS51-214ENST00000534124 CFAP65Q6ZU64 1925 aaKnown RBP33.28■■■□□ 2.92
VPS51-214ENST00000534124 ADGRL2O95490 1459 aa33.27■■■□□ 2.92
VPS51-214ENST00000534124 RRP7BPQ9NSQ0 103 aa33.27■■■□□ 2.92
VPS51-214ENST00000534124 ARHGAP31Q2M1Z3 1444 aa33.25■■■□□ 2.91
VPS51-214ENST00000534124 ZNF335Q9H4Z2 1342 aaPredicted RBP33.23■■■□□ 2.91
VPS51-214ENST00000534124 THEMISQ8N1K5 641 aaPredicted RBP33.22■■■□□ 2.91
VPS51-214ENST00000534124 UBR1Q8IWV7 1749 aa33.22■■■□□ 2.91
VPS51-214ENST00000534124 VWDEQ8N2E2 1590 aa33.21■■■□□ 2.91
VPS51-214ENST00000534124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.21■■■□□ 2.91
VPS51-214ENST00000534124 KANK1Q14678 1352 aa33.19■■■□□ 2.9
VPS51-214ENST00000534124 LMTK2Q8IWU2 1503 aa33.18■■■□□ 2.9
VPS51-214ENST00000534124 MED14O60244 1454 aa33.18■■■□□ 2.9
VPS51-214ENST00000534124 IQGAP1P46940 1657 aa33.17■■■□□ 2.9
VPS51-214ENST00000534124 CHIC2Q9UKJ5 165 aa33.16■■■□□ 2.9
VPS51-214ENST00000534124 ANKLE2Q86XL3 938 aa33.15■■■□□ 2.9
VPS51-214ENST00000534124 FAM50AQ14320 339 aaKnown RBP33.13■■■□□ 2.89
VPS51-214ENST00000534124 CPS1P31327 1500 aa33.12■■■□□ 2.89
VPS51-214ENST00000534124 EFCAB6Q5THR3 1501 aa33.11■■■□□ 2.89
VPS51-214ENST00000534124 NPHP4O75161 1426 aaPredicted RBP33.11■■■□□ 2.89
VPS51-214ENST00000534124 KDM5AP29375 1690 aaKnown RBP33.1■■■□□ 2.89
VPS51-214ENST00000534124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.09■■■□□ 2.894e-6■□□□□ 8.4
VPS51-214ENST00000534124 PIK3C2BO00750 1634 aa33.07■■■□□ 2.88
VPS51-214ENST00000534124 ANKRD50Q9ULJ7 1429 aa33.06■■■□□ 2.88
VPS51-214ENST00000534124 SLIT1O75093 1534 aa33.05■■■□□ 2.88
VPS51-214ENST00000534124 ARHGAP23Q9P227 1491 aa33.03■■■□□ 2.88
VPS51-214ENST00000534124 UNC13BO14795 1591 aa33.01■■■□□ 2.88
VPS51-214ENST00000534124 SYNMO15061 1565 aa33.01■■■□□ 2.88
VPS51-214ENST00000534124 SCAF11Q99590 1463 aaKnown RBP33.01■■■□□ 2.88
VPS51-214ENST00000534124 TET3O43151 1660 aa33■■■□□ 2.87
VPS51-214ENST00000534124 GCC2Q8IWJ2 1684 aa32.97■■■□□ 2.87
VPS51-214ENST00000534124 RPRD2Q5VT52 1461 aaKnown RBP32.97■■■□□ 2.87
VPS51-214ENST00000534124 ROCK1Q13464 1354 aa32.96■■■□□ 2.87
VPS51-214ENST00000534124 NOS1P29475 1434 aa32.95■■■□□ 2.87
VPS51-214ENST00000534124 STRCP1A6NGW2 1772 aa32.94■■■□□ 2.86
VPS51-214ENST00000534124 UBAP1LF5GYI3 381 aa32.92■■■□□ 2.86
VPS51-214ENST00000534124 ADGRB3O60242 1522 aa32.92■■■□□ 2.86
VPS51-214ENST00000534124 TMEM2Q9UHN6 1383 aa32.88■■■□□ 2.85
VPS51-214ENST00000534124 IQGAP3Q86VI3 1631 aa32.88■■■□□ 2.85
VPS51-214ENST00000534124 LTKP29376 864 aa32.84■■■□□ 2.85
VPS51-214ENST00000534124 EID1Q9Y6B2 187 aa32.84■■■□□ 2.85
VPS51-214ENST00000534124 IDI1Q13907 227 aa32.83■■■□□ 2.85
VPS51-214ENST00000534124 TXNDC2Q86VQ3 553 aa32.83■■■□□ 2.85
VPS51-214ENST00000534124 STAG3Q9UJ98 1225 aa32.83■■■□□ 2.85
VPS51-214ENST00000534124 E9PCH4 1651 aa32.82■■■□□ 2.84
VPS51-214ENST00000534124 MYO5BQ9ULV0 1848 aa32.8■■■□□ 2.84
VPS51-214ENST00000534124 SLC52A1Q9NWF4 448 aa32.8■■■□□ 2.84
VPS51-214ENST00000534124 LRRC7Q96NW7 1537 aa32.8■■■□□ 2.84
VPS51-214ENST00000534124 TOM1O60784 492 aa32.75■■■□□ 2.83
VPS51-214ENST00000534124 ALKQ9UM73 1620 aa32.75■■■□□ 2.83
VPS51-214ENST00000534124 PPARGC1BQ86YN6 1023 aaKnown RBP32.74■■■□□ 2.83
VPS51-214ENST00000534124 TMEM131LA2VDJ0 1609 aa32.73■■■□□ 2.83
VPS51-214ENST00000534124 RRBP1Q9P2E9 1410 aaKnown RBP32.73■■■□□ 2.83
VPS51-214ENST00000534124 XIRP1Q702N8 1843 aaKnown RBP32.72■■■□□ 2.83
VPS51-214ENST00000534124 DISP3Q9P2K9 1392 aa32.7■■■□□ 2.82
VPS51-214ENST00000534124 ITGAEP38570 1179 aa32.69■■■□□ 2.82
VPS51-214ENST00000534124 ZFYVE9O95405 1425 aa32.67■■■□□ 2.82
VPS51-214ENST00000534124 SCAF1Q9H7N4 1312 aaKnown RBP32.66■■■□□ 2.82
VPS51-214ENST00000534124 NUP155O75694 1391 aa32.65■■■□□ 2.82
VPS51-214ENST00000534124 PIP4K2BP78356 416 aa32.64■■■□□ 2.82
VPS51-214ENST00000534124 NWD1Q149M9 1564 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms