RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 PKD2Q13563 968 aa26.38■■□□□ 1.81
GSDMD-215ENST00000534018 DISP3Q9P2K9 1392 aa26.37■■□□□ 1.81
GSDMD-215ENST00000534018 FAM135AQ9P2D6 1515 aa26.37■■□□□ 1.81
GSDMD-215ENST00000534018 SPATA31D1Q6ZQQ2 1576 aa26.35■■□□□ 1.81
GSDMD-215ENST00000534018 PZPP20742 1482 aa26.35■■□□□ 1.81
GSDMD-215ENST00000534018 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
GSDMD-215ENST00000534018 LRRC9Q6ZRR7 1453 aa26.34■■□□□ 1.81
GSDMD-215ENST00000534018 TNRQ92752 1358 aa26.33■■□□□ 1.8
GSDMD-215ENST00000534018 RSPH4AQ5TD94 716 aa26.32■■□□□ 1.8
GSDMD-215ENST00000534018 FBXO31Q5XUX0 539 aaPredicted RBP26.31■■□□□ 1.8
GSDMD-215ENST00000534018 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
GSDMD-215ENST00000534018 RNF17Q9BXT8 1623 aaKnown RBP26.29■■□□□ 1.8
GSDMD-215ENST00000534018 WASHC2CQ9Y4E1 1318 aa26.29■■□□□ 1.8
GSDMD-215ENST00000534018 MAST1Q9Y2H9 1570 aa26.29■■□□□ 1.8
GSDMD-215ENST00000534018 ZC3H13Q5T200 1668 aaKnown RBP26.28■■□□□ 1.8
GSDMD-215ENST00000534018 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
GSDMD-215ENST00000534018 TSPY4P0CV99 314 aa26.26■■□□□ 1.79
GSDMD-215ENST00000534018 TSPY10P0CW01 314 aa26.26■■□□□ 1.79
GSDMD-215ENST00000534018 EIF2AK4Q9P2K8 1649 aaKnown RBP26.25■■□□□ 1.79
GSDMD-215ENST00000534018 UBAP1LF5GYI3 381 aa26.24■■□□□ 1.79
GSDMD-215ENST00000534018 ILDR2Q71H61 639 aa26.24■■□□□ 1.79
GSDMD-215ENST00000534018 CEP152O94986 1710 aa26.23■■□□□ 1.79
GSDMD-215ENST00000534018 UGGT1Q9NYU2 1555 aa26.22■■□□□ 1.79
GSDMD-215ENST00000534018 ABCC3O15438 1527 aa26.21■■□□□ 1.79
GSDMD-215ENST00000534018 MAP3K1Q13233 1512 aa26.21■■□□□ 1.79
GSDMD-215ENST00000534018 NLRP1Q9C000 1473 aa26.21■■□□□ 1.79
GSDMD-215ENST00000534018 CFAP65Q6ZU64 1925 aaKnown RBP26.2■■□□□ 1.79
GSDMD-215ENST00000534018 MROH1Q8NDA8 1641 aa26.2■■□□□ 1.78
GSDMD-215ENST00000534018 MIA2Q96PC5 1412 aa26.2■■□□□ 1.78
GSDMD-215ENST00000534018 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
GSDMD-215ENST00000534018 MYOM3Q5VTT5 1437 aa26.19■■□□□ 1.78
GSDMD-215ENST00000534018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.19■■□□□ 1.78
GSDMD-215ENST00000534018 CROCC2H7BZ55 1655 aa26.18■■□□□ 1.78
GSDMD-215ENST00000534018 DEPDC5O75140 1603 aa26.17■■□□□ 1.78
GSDMD-215ENST00000534018 CPS1P31327 1500 aa26.16■■□□□ 1.78
GSDMD-215ENST00000534018 IQGAP1P46940 1657 aa26.15■■□□□ 1.78
GSDMD-215ENST00000534018 SHANK2Q9UPX8 1470 aa26.15■■□□□ 1.78
GSDMD-215ENST00000534018 VWDEQ8N2E2 1590 aa26.14■■□□□ 1.78
GSDMD-215ENST00000534018 ANKLE2Q86XL3 938 aa26.12■■□□□ 1.77
GSDMD-215ENST00000534018 THEMISQ8N1K5 641 aaPredicted RBP26.12■■□□□ 1.77
GSDMD-215ENST00000534018 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
GSDMD-215ENST00000534018 DUOX2Q9NRD8 1548 aa26.11■■□□□ 1.77
GSDMD-215ENST00000534018 NPHP4O75161 1426 aaPredicted RBP26.11■■□□□ 1.77
GSDMD-215ENST00000534018 UBR1Q8IWV7 1749 aa26.1■■□□□ 1.77
GSDMD-215ENST00000534018 MED14O60244 1454 aa26.1■■□□□ 1.77
GSDMD-215ENST00000534018 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
GSDMD-215ENST00000534018 STRCP1A6NGW2 1772 aa26.08■■□□□ 1.77
GSDMD-215ENST00000534018 SOCS7O14512 581 aa26.07■■□□□ 1.76
GSDMD-215ENST00000534018 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
GSDMD-215ENST00000534018 PRDM15P57071 1507 aaPredicted RBP26.05■■□□□ 1.76
GSDMD-215ENST00000534018 PIP4K2BP78356 416 aa26.03■■□□□ 1.76
GSDMD-215ENST00000534018 KIF15Q9NS87 1388 aa26.02■■□□□ 1.76
GSDMD-215ENST00000534018 ABCC5O15440 1437 aa26.01■■□□□ 1.75
GSDMD-215ENST00000534018 TOM1O60784 492 aa26■■□□□ 1.75
GSDMD-215ENST00000534018 SYNMO15061 1565 aa25.99■■□□□ 1.75
GSDMD-215ENST00000534018 ERBINQ96RT1 1412 aa25.99■■□□□ 1.75
GSDMD-215ENST00000534018 ALKQ9UM73 1620 aa25.99■■□□□ 1.75
GSDMD-215ENST00000534018 DAPK1P53355 1430 aa25.97■■□□□ 1.75
GSDMD-215ENST00000534018 HSPA1LP34931 641 aa25.97■■□□□ 1.75
GSDMD-215ENST00000534018 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
GSDMD-215ENST00000534018 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
GSDMD-215ENST00000534018 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.75
GSDMD-215ENST00000534018 APLP2Q06481 763 aa25.95■■□□□ 1.74
GSDMD-215ENST00000534018 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
GSDMD-215ENST00000534018 SCAF11Q99590 1463 aaKnown RBP25.93■■□□□ 1.74
GSDMD-215ENST00000534018 ARHGAP31Q2M1Z3 1444 aa25.93■■□□□ 1.74
GSDMD-215ENST00000534018 LRRC7Q96NW7 1537 aa25.93■■□□□ 1.74
GSDMD-215ENST00000534018 SLIT1O75093 1534 aa25.92■■□□□ 1.74
GSDMD-215ENST00000534018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.91■■□□□ 1.741e-6■□□□□ 9.3
GSDMD-215ENST00000534018 ARHGAP23Q9P227 1491 aa25.91■■□□□ 1.74
GSDMD-215ENST00000534018 XIRP1Q702N8 1843 aaKnown RBP25.88■■□□□ 1.73
GSDMD-215ENST00000534018 KANK1Q14678 1352 aa25.86■■□□□ 1.73
GSDMD-215ENST00000534018 KDM5AP29375 1690 aaKnown RBP25.86■■□□□ 1.73
GSDMD-215ENST00000534018 LTKP29376 864 aa25.85■■□□□ 1.73
GSDMD-215ENST00000534018 CHIC2Q9UKJ5 165 aa25.85■■□□□ 1.73
GSDMD-215ENST00000534018 ANKRD30AQ9BXX3 1397 aa25.84■■□□□ 1.73
GSDMD-215ENST00000534018 LMTK2Q8IWU2 1503 aa25.83■■□□□ 1.73
GSDMD-215ENST00000534018 TXNDC2Q86VQ3 553 aa25.83■■□□□ 1.73
GSDMD-215ENST00000534018 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
GSDMD-215ENST00000534018 EFCAB6Q5THR3 1501 aa25.81■■□□□ 1.72
GSDMD-215ENST00000534018 STAG3Q9UJ98 1225 aa25.78■■□□□ 1.72
GSDMD-215ENST00000534018 EID1Q9Y6B2 187 aa25.78■■□□□ 1.72
GSDMD-215ENST00000534018 TMEM2Q9UHN6 1383 aa25.78■■□□□ 1.72
GSDMD-215ENST00000534018 ADGRL2O95490 1459 aa25.76■■□□□ 1.71
GSDMD-215ENST00000534018 MYO5BQ9ULV0 1848 aa25.75■■□□□ 1.71
GSDMD-215ENST00000534018 ADGRB3O60242 1522 aa25.75■■□□□ 1.71
GSDMD-215ENST00000534018 IDI1Q13907 227 aa25.72■■□□□ 1.71
GSDMD-215ENST00000534018 NOS1P29475 1434 aa25.71■■□□□ 1.71
GSDMD-215ENST00000534018 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.7
GSDMD-215ENST00000534018 TET3O43151 1660 aa25.7■■□□□ 1.7
GSDMD-215ENST00000534018 GCC2Q8IWJ2 1684 aa25.7■■□□□ 1.7
GSDMD-215ENST00000534018 PHF23Q9BUL5 403 aaPredicted RBP25.69■■□□□ 1.7
GSDMD-215ENST00000534018 ANKRD50Q9ULJ7 1429 aa25.66■■□□□ 1.7
GSDMD-215ENST00000534018 RPRD2Q5VT52 1461 aaKnown RBP25.64■■□□□ 1.69
GSDMD-215ENST00000534018 NWD1Q149M9 1564 aa25.64■■□□□ 1.69
GSDMD-215ENST00000534018 SLC26A8Q96RN1 970 aa25.63■■□□□ 1.69
GSDMD-215ENST00000534018 UNC13BO14795 1591 aa25.63■■□□□ 1.69
GSDMD-215ENST00000534018 TMEM94Q12767 1356 aa25.62■■□□□ 1.69
GSDMD-215ENST00000534018 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
GSDMD-215ENST00000534018 TMEM131LA2VDJ0 1609 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms