RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 CCER2I3L3R5 266 aa39.83■■■■□ 3.97
SAMD1-202ENST00000533683 INO80Q9ULG1 1556 aaPredicted RBP39.83■■■■□ 3.97
SAMD1-202ENST00000533683 CCDC7Q96M83 1385 aa39.83■■■■□ 3.97
SAMD1-202ENST00000533683 ATP7AQ04656 1500 aa39.82■■■■□ 3.96
SAMD1-202ENST00000533683 RALGAPBQ86X10 1494 aa39.79■■■■□ 3.96
SAMD1-202ENST00000533683 DCAF11Q8TEB1 546 aa39.78■■■■□ 3.96
SAMD1-202ENST00000533683 KDM2AQ9Y2K7 1162 aa39.76■■■■□ 3.96
SAMD1-202ENST00000533683 USP47Q96K76 1375 aa39.75■■■■□ 3.95
SAMD1-202ENST00000533683 ATP10AO60312 1499 aa39.75■■■■□ 3.95
SAMD1-202ENST00000533683 POLR1AO95602 1720 aaPredicted RBP39.75■■■■□ 3.95
SAMD1-202ENST00000533683 CNTLNQ9NXG0 1405 aa39.73■■■■□ 3.95
SAMD1-202ENST00000533683 KDM5CP41229 1560 aa39.72■■■■□ 3.95
SAMD1-202ENST00000533683 KIF7Q2M1P5 1343 aa39.7■■■■□ 3.95
SAMD1-202ENST00000533683 DEPDC5O75140 1603 aa39.69■■■■□ 3.94
SAMD1-202ENST00000533683 CD109Q6YHK3 1445 aa39.69■■■■□ 3.94
SAMD1-202ENST00000533683 MYT1LQ9UL68 1186 aa39.65■■■■□ 3.94
SAMD1-202ENST00000533683 RGL3Q3MIN7 710 aa39.63■■■■□ 3.94
SAMD1-202ENST00000533683 CARD11Q9BXL7 1154 aa39.63■■■■□ 3.94
SAMD1-202ENST00000533683 E9PCH4 1651 aa39.62■■■■□ 3.93
SAMD1-202ENST00000533683 DHX29Q7Z478 1369 aaKnown RBP39.62■■■■□ 3.93
SAMD1-202ENST00000533683 BCORL1Q5H9F3 1711 aa39.62■■■■□ 3.93
SAMD1-202ENST00000533683 A2MP01023 1474 aa39.61■■■■□ 3.93
SAMD1-202ENST00000533683 ZNF518AQ6AHZ1 1483 aa39.61■■■■□ 3.93
SAMD1-202ENST00000533683 CFAP74Q9C0B2 1584 aa39.6■■■■□ 3.93
SAMD1-202ENST00000533683 KIDINS220Q9ULH0 1771 aa39.6■■■■□ 3.93
SAMD1-202ENST00000533683 PRAG1Q86YV5 1406 aa39.59■■■■□ 3.93
SAMD1-202ENST00000533683 EIF2AK4Q9P2K8 1649 aaKnown RBP39.57■■■■□ 3.93
SAMD1-202ENST00000533683 KIF3BO15066 747 aa39.56■■■■□ 3.92
SAMD1-202ENST00000533683 VWDEQ8N2E2 1590 aa39.55■■■■□ 3.92
SAMD1-202ENST00000533683 TRPM1Q7Z4N2 1603 aa39.53■■■■□ 3.92
SAMD1-202ENST00000533683 TET3O43151 1660 aa39.53■■■■□ 3.92
SAMD1-202ENST00000533683 KANK1Q14678 1352 aa39.52■■■■□ 3.92
SAMD1-202ENST00000533683 ROCK2O75116 1388 aaKnown RBP39.52■■■■□ 3.92
SAMD1-202ENST00000533683 POGZQ7Z3K3 1410 aa39.5■■■■□ 3.91
SAMD1-202ENST00000533683 PRDM15P57071 1507 aaPredicted RBP39.49■■■■□ 3.91
SAMD1-202ENST00000533683 MROH1Q8NDA8 1641 aa39.49■■■■□ 3.91
SAMD1-202ENST00000533683 TRPM2O94759 1503 aa39.48■■■■□ 3.91
SAMD1-202ENST00000533683 PTPRTO14522 1441 aa39.47■■■■□ 3.91
SAMD1-202ENST00000533683 ARID4BQ4LE39 1312 aaPredicted RBP39.47■■■■□ 3.91
SAMD1-202ENST00000533683 SPHKAPQ2M3C7 1700 aa39.46■■■■□ 3.91
SAMD1-202ENST00000533683 ST20-MTHFSA0A0A6YYL1 179 aa39.43■■■■□ 3.9
SAMD1-202ENST00000533683 CYB5RLQ6IPT4 315 aa39.42■■■■□ 3.9
SAMD1-202ENST00000533683 MLH3Q9UHC1 1453 aa39.41■■■■□ 3.9
SAMD1-202ENST00000533683 PRKRIP1Q9H875 184 aaPredicted RBP39.41■■■■□ 3.9
SAMD1-202ENST00000533683 NBPF1Q3BBV0 1214 aa39.39■■■■□ 3.9
SAMD1-202ENST00000533683 GPRASP1Q5JY77 1395 aa39.39■■■■□ 3.9
SAMD1-202ENST00000533683 NEO1Q92859 1461 aa39.39■■■■□ 3.9
SAMD1-202ENST00000533683 HECW2Q9P2P5 1572 aa39.36■■■■□ 3.89
SAMD1-202ENST00000533683 CLTCL1P53675 1640 aa39.36■■■■□ 3.89
SAMD1-202ENST00000533683 CEP152O94986 1710 aa39.36■■■■□ 3.89
SAMD1-202ENST00000533683 POLR3GLQ9BT43 218 aa39.36■■■■□ 3.89
SAMD1-202ENST00000533683 RIMBP3CA6NJZ7 1639 aa39.33■■■■□ 3.89
SAMD1-202ENST00000533683 RIMBP3BA6NNM3 1639 aa39.33■■■■□ 3.89
SAMD1-202ENST00000533683 RIMBP3Q9UFD9 1639 aa39.33■■■■□ 3.89
SAMD1-202ENST00000533683 LAMC1P11047 1609 aa39.33■■■■□ 3.89
SAMD1-202ENST00000533683 RNF17Q9BXT8 1623 aaKnown RBP39.31■■■■□ 3.88
SAMD1-202ENST00000533683 FRMPD1Q5SYB0 1578 aa39.3■■■■□ 3.88
SAMD1-202ENST00000533683 MAP3K4Q9Y6R4 1608 aa39.28■■■■□ 3.88
SAMD1-202ENST00000533683 EFCAB6Q5THR3 1501 aa39.28■■■■□ 3.88
SAMD1-202ENST00000533683 RAPGEF3O95398 923 aa39.26■■■■□ 3.88
SAMD1-202ENST00000533683 LMTK2Q8IWU2 1503 aa39.25■■■■□ 3.87
SAMD1-202ENST00000533683 ABCA6Q8N139 1617 aa39.25■■■■□ 3.87
SAMD1-202ENST00000533683 CCDC184Q52MB2 194 aa39.24■■■■□ 3.87
SAMD1-202ENST00000533683 PPRC1Q5VV67 1664 aaKnown RBP39.24■■■■□ 3.87
SAMD1-202ENST00000533683 MADDQ8WXG6 1647 aa39.22■■■■□ 3.87
SAMD1-202ENST00000533683 GLI2P10070 1586 aa39.2■■■■□ 3.87
SAMD1-202ENST00000533683 STAC3Q96MF2 364 aa39.18■■■■□ 3.86
SAMD1-202ENST00000533683 NEURL4Q96JN8 1562 aa39.16■■■■□ 3.86
SAMD1-202ENST00000533683 UGGT1Q9NYU2 1555 aa39.15■■■■□ 3.86
SAMD1-202ENST00000533683 RICTORQ6R327 1708 aa39.15■■■■□ 3.86
SAMD1-202ENST00000533683 GGT6Q6P531 493 aa39.13■■■■□ 3.85
SAMD1-202ENST00000533683 MRS2Q9HD23 443 aa39.11■■■■□ 3.85
SAMD1-202ENST00000533683 TESK2Q96S53 571 aa39.11■■■■□ 3.85
SAMD1-202ENST00000533683 DIP2CQ9Y2E4 1556 aa39.1■■■■□ 3.85
SAMD1-202ENST00000533683 KIF1BO60333 1816 aa39.07■■■■□ 3.85
SAMD1-202ENST00000533683 HNRNPUQ00839 825 aaKnown RBP eCLIP39.06■■■■□ 3.84
SAMD1-202ENST00000533683 COL17A1Q9UMD9 1497 aaPredicted RBP39.05■■■■□ 3.84
SAMD1-202ENST00000533683 NPATQ14207 1427 aa39.05■■■■□ 3.84
SAMD1-202ENST00000533683 FAM69CQ0P6D2 419 aa39.04■■■■□ 3.84
SAMD1-202ENST00000533683 DIP2BQ9P265 1576 aa39.03■■■■□ 3.84
SAMD1-202ENST00000533683 ABCC3O15438 1527 aa39.02■■■■□ 3.84
SAMD1-202ENST00000533683 DISP3Q9P2K9 1392 aa39.01■■■■□ 3.83
SAMD1-202ENST00000533683 WASHC2CQ9Y4E1 1318 aa39.01■■■■□ 3.83
SAMD1-202ENST00000533683 CNGB1Q14028 1251 aaPredicted RBP39.01■■■■□ 3.83
SAMD1-202ENST00000533683 IQGAP1P46940 1657 aa39■■■■□ 3.83
SAMD1-202ENST00000533683 FAM9BQ8IZU0 186 aa38.98■■■■□ 3.83
SAMD1-202ENST00000533683 MROH2AA6NES4 1674 aa38.97■■■■□ 3.83
SAMD1-202ENST00000533683 SUPT16HQ9Y5B9 1047 aaKnown RBP38.97■■■■□ 3.83
SAMD1-202ENST00000533683 YEATS2Q9ULM3 1422 aa38.97■■■■□ 3.83
SAMD1-202ENST00000533683 CFAP65Q6ZU64 1925 aaKnown RBP38.97■■■■□ 3.83
SAMD1-202ENST00000533683 MYOM2P54296 1465 aa38.96■■■■□ 3.83
SAMD1-202ENST00000533683 PELP1Q8IZL8 1130 aaKnown RBP38.95■■■■□ 3.83
SAMD1-202ENST00000533683 KIAA1210Q9ULL0 1709 aa38.95■■■■□ 3.83
SAMD1-202ENST00000533683 IFT172Q9UG01 1749 aa38.94■■■■□ 3.82
SAMD1-202ENST00000533683 TMF1P82094 1093 aa38.93■■■■□ 3.82
SAMD1-202ENST00000533683 SCAF11Q99590 1463 aaKnown RBP38.92■■■■□ 3.82
SAMD1-202ENST00000533683 CAMSAP1Q5T5Y3 1602 aa38.92■■■■□ 3.82
SAMD1-202ENST00000533683 ADGRB3O60242 1522 aa38.91■■■■□ 3.82
SAMD1-202ENST00000533683 ADGRF5Q8IZF2 1346 aa38.89■■■■□ 3.82
SAMD1-202ENST00000533683 TSPOAP1O95153 1857 aa38.86■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms