RNA–Protein interactions for RNA: ENST00000533661.1

SBF2-213, Transcript of SET binding factor 2, humanhuman

TSL 3

Gene SBF2, Length 999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF2-213ENST00000533661 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
SBF2-213ENST00000533661 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
SBF2-213ENST00000533661 KIAA1107Q9UPP5 1409 aa18.24■□□□□ 0.51
SBF2-213ENST00000533661 A2MP01023 1474 aa18.24■□□□□ 0.51
SBF2-213ENST00000533661 ZNF142P52746 1687 aaPredicted RBP18.23■□□□□ 0.51
SBF2-213ENST00000533661 APLP2Q06481 763 aa18.23■□□□□ 0.51
SBF2-213ENST00000533661 PTPRTO14522 1441 aa18.23■□□□□ 0.51
SBF2-213ENST00000533661 CAMSAP1Q5T5Y3 1602 aa18.22■□□□□ 0.51
SBF2-213ENST00000533661 NPATQ14207 1427 aa18.22■□□□□ 0.51
SBF2-213ENST00000533661 NCOA1Q15788 1441 aa18.21■□□□□ 0.51
SBF2-213ENST00000533661 ZMYM3Q14202 1370 aa18.18■□□□□ 0.5
SBF2-213ENST00000533661 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
SBF2-213ENST00000533661 GGT6Q6P531 493 aa18.16■□□□□ 0.5
SBF2-213ENST00000533661 ABCB7O75027 752 aa18.15■□□□□ 0.5
SBF2-213ENST00000533661 ZNF219Q9P2Y4 722 aaPredicted RBP18.15■□□□□ 0.5
SBF2-213ENST00000533661 LTBP4Q8N2S1 1624 aa18.14■□□□□ 0.49
SBF2-213ENST00000533661 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
SBF2-213ENST00000533661 PTPRKQ15262 1439 aa18.12■□□□□ 0.49
SBF2-213ENST00000533661 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
SBF2-213ENST00000533661 CAMSAP2Q08AD1 1489 aa18.12■□□□□ 0.49
SBF2-213ENST00000533661 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
SBF2-213ENST00000533661 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
SBF2-213ENST00000533661 IQSEC2Q5JU85 1478 aa18.11■□□□□ 0.49
SBF2-213ENST00000533661 POLR1AO95602 1720 aaPredicted RBP18.1■□□□□ 0.49
SBF2-213ENST00000533661 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
SBF2-213ENST00000533661 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
SBF2-213ENST00000533661 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
SBF2-213ENST00000533661 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
SBF2-213ENST00000533661 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.49
SBF2-213ENST00000533661 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
SBF2-213ENST00000533661 PTPN23Q9H3S7 1636 aa18.07■□□□□ 0.48
SBF2-213ENST00000533661 SPATA31D1Q6ZQQ2 1576 aa18.07■□□□□ 0.48
SBF2-213ENST00000533661 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
SBF2-213ENST00000533661 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
SBF2-213ENST00000533661 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
SBF2-213ENST00000533661 TCOF1Q13428 1488 aaKnown RBP18.05■□□□□ 0.48
SBF2-213ENST00000533661 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
SBF2-213ENST00000533661 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
SBF2-213ENST00000533661 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
SBF2-213ENST00000533661 A2ML1A8K2U0 1454 aa18.04■□□□□ 0.48
SBF2-213ENST00000533661 PKD2Q13563 968 aa18.03■□□□□ 0.48
SBF2-213ENST00000533661 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
SBF2-213ENST00000533661 ZNF335Q9H4Z2 1342 aaPredicted RBP18.02■□□□□ 0.48
SBF2-213ENST00000533661 KIF3BO15066 747 aa18.02■□□□□ 0.48
SBF2-213ENST00000533661 CROCC2H7BZ55 1655 aa18.01■□□□□ 0.47
SBF2-213ENST00000533661 PZPP20742 1482 aa18.01■□□□□ 0.47
SBF2-213ENST00000533661 TNRQ92752 1358 aa18■□□□□ 0.47
SBF2-213ENST00000533661 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
SBF2-213ENST00000533661 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
SBF2-213ENST00000533661 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
SBF2-213ENST00000533661 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
SBF2-213ENST00000533661 MAST1Q9Y2H9 1570 aa17.97■□□□□ 0.47
SBF2-213ENST00000533661 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
SBF2-213ENST00000533661 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
SBF2-213ENST00000533661 CEP152O94986 1710 aa17.95■□□□□ 0.46
SBF2-213ENST00000533661 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
SBF2-213ENST00000533661 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
SBF2-213ENST00000533661 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
SBF2-213ENST00000533661 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
SBF2-213ENST00000533661 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
SBF2-213ENST00000533661 UGGT1Q9NYU2 1555 aa17.93■□□□□ 0.46
SBF2-213ENST00000533661 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
SBF2-213ENST00000533661 NLRP1Q9C000 1473 aa17.93■□□□□ 0.46
SBF2-213ENST00000533661 CPS1P31327 1500 aa17.91■□□□□ 0.46
SBF2-213ENST00000533661 CFAP65Q6ZU64 1925 aaKnown RBP17.9■□□□□ 0.46
SBF2-213ENST00000533661 ABCC3O15438 1527 aa17.9■□□□□ 0.46
SBF2-213ENST00000533661 DEPDC5O75140 1603 aa17.9■□□□□ 0.46
SBF2-213ENST00000533661 IQGAP1P46940 1657 aa17.9■□□□□ 0.46
SBF2-213ENST00000533661 ILDR2Q71H61 639 aa17.89■□□□□ 0.45
SBF2-213ENST00000533661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
SBF2-213ENST00000533661 MROH1Q8NDA8 1641 aa17.88■□□□□ 0.45
SBF2-213ENST00000533661 DAPK1P53355 1430 aa17.88■□□□□ 0.45
SBF2-213ENST00000533661 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
SBF2-213ENST00000533661 POTEHQ6S545 545 aa17.87■□□□□ 0.45
SBF2-213ENST00000533661 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
SBF2-213ENST00000533661 ABCC5O15440 1437 aa17.86■□□□□ 0.45
SBF2-213ENST00000533661 NPHP4O75161 1426 aaPredicted RBP17.85■□□□□ 0.45
SBF2-213ENST00000533661 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
SBF2-213ENST00000533661 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
SBF2-213ENST00000533661 THEMISQ8N1K5 641 aaPredicted RBP17.85■□□□□ 0.45
SBF2-213ENST00000533661 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
SBF2-213ENST00000533661 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
SBF2-213ENST00000533661 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
SBF2-213ENST00000533661 UBR1Q8IWV7 1749 aa17.84■□□□□ 0.45
SBF2-213ENST00000533661 MED14O60244 1454 aa17.82■□□□□ 0.44
SBF2-213ENST00000533661 SOCS7O14512 581 aa17.82■□□□□ 0.44
SBF2-213ENST00000533661 SYNMO15061 1565 aa17.82■□□□□ 0.44
SBF2-213ENST00000533661 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
SBF2-213ENST00000533661 PIP4K2BP78356 416 aa17.81■□□□□ 0.44
SBF2-213ENST00000533661 STRCP1A6NGW2 1772 aa17.8■□□□□ 0.44
SBF2-213ENST00000533661 TOM1O60784 492 aa17.79■□□□□ 0.44
SBF2-213ENST00000533661 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
SBF2-213ENST00000533661 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
SBF2-213ENST00000533661 ADGRL2O95490 1459 aa17.77■□□□□ 0.44
SBF2-213ENST00000533661 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
SBF2-213ENST00000533661 GCC2Q8IWJ2 1684 aa17.74■□□□□ 0.43
SBF2-213ENST00000533661 PIK3C2BO00750 1634 aa17.74■□□□□ 0.43
SBF2-213ENST00000533661 POLA2Q14181 598 aa17.74■□□□□ 0.43
SBF2-213ENST00000533661 SCAF11Q99590 1463 aaKnown RBP17.74■□□□□ 0.43
SBF2-213ENST00000533661 HSPA1LP34931 641 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms