RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 DISP3Q9P2K9 1392 aa17.86■□□□□ 0.45
CLCF1-202ENST00000533438 FAM135AQ9P2D6 1515 aa17.86■□□□□ 0.45
CLCF1-202ENST00000533438 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.45
CLCF1-202ENST00000533438 KDM5DQ9BY66 1539 aa17.83■□□□□ 0.45
CLCF1-202ENST00000533438 TSPY4P0CV99 314 aa17.83■□□□□ 0.44
CLCF1-202ENST00000533438 TSPY10P0CW01 314 aa17.83■□□□□ 0.44
CLCF1-202ENST00000533438 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.44
CLCF1-202ENST00000533438 KIF3BO15066 747 aa17.82■□□□□ 0.44
CLCF1-202ENST00000533438 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
CLCF1-202ENST00000533438 PKD2Q13563 968 aa17.81■□□□□ 0.44
CLCF1-202ENST00000533438 CROCC2H7BZ55 1655 aa17.8■□□□□ 0.44
CLCF1-202ENST00000533438 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
CLCF1-202ENST00000533438 PTPN23Q9H3S7 1636 aa17.79■□□□□ 0.44
CLCF1-202ENST00000533438 PZPP20742 1482 aa17.78■□□□□ 0.44
CLCF1-202ENST00000533438 PLA2R1Q13018 1463 aa17.78■□□□□ 0.44
CLCF1-202ENST00000533438 APLP2Q06481 763 aa17.77■□□□□ 0.44
CLCF1-202ENST00000533438 ZC3H13Q5T200 1668 aaKnown RBP17.77■□□□□ 0.43
CLCF1-202ENST00000533438 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
CLCF1-202ENST00000533438 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
CLCF1-202ENST00000533438 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
CLCF1-202ENST00000533438 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
CLCF1-202ENST00000533438 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
CLCF1-202ENST00000533438 MROH1Q8NDA8 1641 aa17.75■□□□□ 0.43
CLCF1-202ENST00000533438 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
CLCF1-202ENST00000533438 ABCC5O15440 1437 aa17.73■□□□□ 0.43
CLCF1-202ENST00000533438 FGD6Q6ZV73 1430 aa17.73■□□□□ 0.43
CLCF1-202ENST00000533438 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
CLCF1-202ENST00000533438 ABCC3O15438 1527 aa17.72■□□□□ 0.43
CLCF1-202ENST00000533438 FBXO31Q5XUX0 539 aaPredicted RBP17.72■□□□□ 0.43
CLCF1-202ENST00000533438 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
CLCF1-202ENST00000533438 TNRQ92752 1358 aa17.71■□□□□ 0.43
CLCF1-202ENST00000533438 CEP152O94986 1710 aa17.71■□□□□ 0.43
CLCF1-202ENST00000533438 DAPK1P53355 1430 aa17.71■□□□□ 0.43
CLCF1-202ENST00000533438 POLR1AO95602 1720 aaPredicted RBP17.69■□□□□ 0.42
CLCF1-202ENST00000533438 SPATA31D1Q6ZQQ2 1576 aa17.68■□□□□ 0.42
CLCF1-202ENST00000533438 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
CLCF1-202ENST00000533438 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
CLCF1-202ENST00000533438 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
CLCF1-202ENST00000533438 KIF15Q9NS87 1388 aa17.67■□□□□ 0.42
CLCF1-202ENST00000533438 DEPDC5O75140 1603 aa17.66■□□□□ 0.42
CLCF1-202ENST00000533438 UBAP1LF5GYI3 381 aa17.66■□□□□ 0.42
CLCF1-202ENST00000533438 NEURL4Q96JN8 1562 aa17.66■□□□□ 0.42
CLCF1-202ENST00000533438 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
CLCF1-202ENST00000533438 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
CLCF1-202ENST00000533438 CFAP65Q6ZU64 1925 aaKnown RBP17.63■□□□□ 0.41
CLCF1-202ENST00000533438 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
CLCF1-202ENST00000533438 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
CLCF1-202ENST00000533438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.414e-7■■■■■ 49.5
CLCF1-202ENST00000533438 ARHGAP31Q2M1Z3 1444 aa17.6■□□□□ 0.41
CLCF1-202ENST00000533438 ADGRL2O95490 1459 aa17.6■□□□□ 0.41
CLCF1-202ENST00000533438 VWDEQ8N2E2 1590 aa17.58■□□□□ 0.41
CLCF1-202ENST00000533438 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
CLCF1-202ENST00000533438 UBR1Q8IWV7 1749 aa17.58■□□□□ 0.4
CLCF1-202ENST00000533438 MED14O60244 1454 aa17.57■□□□□ 0.4
CLCF1-202ENST00000533438 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
CLCF1-202ENST00000533438 TOM1O60784 492 aa17.56■□□□□ 0.4
CLCF1-202ENST00000533438 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
CLCF1-202ENST00000533438 CPS1P31327 1500 aa17.56■□□□□ 0.4
CLCF1-202ENST00000533438 LMTK2Q8IWU2 1503 aa17.56■□□□□ 0.4
CLCF1-202ENST00000533438 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
CLCF1-202ENST00000533438 HSPA1LP34931 641 aa17.53■□□□□ 0.4
CLCF1-202ENST00000533438 KANK1Q14678 1352 aa17.53■□□□□ 0.4
CLCF1-202ENST00000533438 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
CLCF1-202ENST00000533438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
CLCF1-202ENST00000533438 NPHP4O75161 1426 aaPredicted RBP17.52■□□□□ 0.4
CLCF1-202ENST00000533438 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
CLCF1-202ENST00000533438 KDM5AP29375 1690 aaKnown RBP17.5■□□□□ 0.39
CLCF1-202ENST00000533438 EFCAB6Q5THR3 1501 aa17.5■□□□□ 0.39
CLCF1-202ENST00000533438 ARHGAP23Q9P227 1491 aa17.5■□□□□ 0.39
CLCF1-202ENST00000533438 SLIT1O75093 1534 aa17.49■□□□□ 0.39
CLCF1-202ENST00000533438 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
CLCF1-202ENST00000533438 SYNMO15061 1565 aa17.48■□□□□ 0.39
CLCF1-202ENST00000533438 STRCP1A6NGW2 1772 aa17.47■□□□□ 0.39
CLCF1-202ENST00000533438 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
CLCF1-202ENST00000533438 NOS1P29475 1434 aa17.46■□□□□ 0.39
CLCF1-202ENST00000533438 UNC13BO14795 1591 aa17.45■□□□□ 0.38
CLCF1-202ENST00000533438 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
CLCF1-202ENST00000533438 TET3O43151 1660 aa17.44■□□□□ 0.38
CLCF1-202ENST00000533438 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
CLCF1-202ENST00000533438 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
CLCF1-202ENST00000533438 PIP4K2BP78356 416 aa17.43■□□□□ 0.38
CLCF1-202ENST00000533438 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
CLCF1-202ENST00000533438 LTKP29376 864 aa17.42■□□□□ 0.38
CLCF1-202ENST00000533438 IDI1Q13907 227 aa17.41■□□□□ 0.38
CLCF1-202ENST00000533438 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
CLCF1-202ENST00000533438 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-202ENST00000533438 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
CLCF1-202ENST00000533438 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
CLCF1-202ENST00000533438 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
CLCF1-202ENST00000533438 IQGAP3Q86VI3 1631 aa17.38■□□□□ 0.37
CLCF1-202ENST00000533438 E9PCH4 1651 aa17.38■□□□□ 0.37
CLCF1-202ENST00000533438 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
CLCF1-202ENST00000533438 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
CLCF1-202ENST00000533438 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
CLCF1-202ENST00000533438 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
CLCF1-202ENST00000533438 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
CLCF1-202ENST00000533438 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
CLCF1-202ENST00000533438 XIRP1Q702N8 1843 aaKnown RBP17.35■□□□□ 0.37
CLCF1-202ENST00000533438 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
CLCF1-202ENST00000533438 RRBP1Q9P2E9 1410 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms