RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 NCBP3Q53F19 620 aaKnown RBP9.76□□□□□ -0.85
CSRP1-218ENST00000533402 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
CSRP1-218ENST00000533402 EFCAB2Q5VUJ9 269 aa9.76□□□□□ -0.85
CSRP1-218ENST00000533402 PDE4AP27815 886 aa9.75□□□□□ -0.85
CSRP1-218ENST00000533402 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
CSRP1-218ENST00000533402 TPM4P67936 248 aa9.75□□□□□ -0.85
CSRP1-218ENST00000533402 DDX49Q9Y6V7 483 aaKnown RBP9.75□□□□□ -0.85
CSRP1-218ENST00000533402 PLEKHH2Q8IVE3 1493 aa9.75□□□□□ -0.85
CSRP1-218ENST00000533402 RDXP35241 583 aaKnown RBP9.74□□□□□ -0.85
CSRP1-218ENST00000533402 POGKQ9P215 609 aa9.74□□□□□ -0.85
CSRP1-218ENST00000533402 ZNF592Q92610 1267 aa9.74□□□□□ -0.85
CSRP1-218ENST00000533402 TAF7LQ5H9L4 462 aa9.74□□□□□ -0.85
CSRP1-218ENST00000533402 KCNJ4P48050 445 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 NFKBIBQ15653 356 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 UACAQ9BZF9 1416 aa9.73□□□□□ -0.85
CSRP1-218ENST00000533402 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
CSRP1-218ENST00000533402 CCAR2Q8N163 923 aaKnown RBP9.72□□□□□ -0.85
CSRP1-218ENST00000533402 SUPT6HQ7KZ85 1726 aaKnown RBP9.72□□□□□ -0.85
CSRP1-218ENST00000533402 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
CSRP1-218ENST00000533402 MFAP1P55081 439 aaKnown RBP9.72□□□□□ -0.85
CSRP1-218ENST00000533402 BBXQ8WY36 941 aaPredicted RBP9.72□□□□□ -0.85
CSRP1-218ENST00000533402 NUDCQ9Y266 331 aa9.72□□□□□ -0.85
CSRP1-218ENST00000533402 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.85
CSRP1-218ENST00000533402 MRE11P49959 708 aa9.71□□□□□ -0.85
CSRP1-218ENST00000533402 EHBP1L1Q8N3D4 1523 aa9.71□□□□□ -0.85
CSRP1-218ENST00000533402 DIAPH3Q9NSV4 1193 aa9.71□□□□□ -0.86
CSRP1-218ENST00000533402 PTPRGP23470 1445 aa9.71□□□□□ -0.86
CSRP1-218ENST00000533402 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.86
CSRP1-218ENST00000533402 PLEKHG5O94827 1062 aa9.71□□□□□ -0.86
CSRP1-218ENST00000533402 NAP1L2Q9ULW6 460 aaPredicted RBP9.71□□□□□ -0.86
CSRP1-218ENST00000533402 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
CSRP1-218ENST00000533402 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
CSRP1-218ENST00000533402 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
CSRP1-218ENST00000533402 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
CSRP1-218ENST00000533402 ARGLU1Q9NWB6 273 aaPredicted RBP9.7□□□□□ -0.86
CSRP1-218ENST00000533402 H0YHG0 523 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 OSCARQ8IYS5 282 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 IQGAP2Q13576 1575 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 EIF3AQ14152 1382 aaKnown RBP9.69□□□□□ -0.86
CSRP1-218ENST00000533402 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 CTTNBP2Q8WZ74 1663 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 IGF1RP08069 1367 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSRP1-218ENST00000533402 DEF6Q9H4E7 631 aa9.69□□□□□ -0.86
CSRP1-218ENST00000533402 WASHC2AQ641Q2 1341 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
CSRP1-218ENST00000533402 HSP90AB3PQ58FF7 597 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 KNSTRNQ9Y448 316 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 FAM161AQ3B820 660 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
CSRP1-218ENST00000533402 G3V3G9 751 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 TPM3P06753 285 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 MYOM3Q5VTT5 1437 aa9.68□□□□□ -0.86
CSRP1-218ENST00000533402 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
CSRP1-218ENST00000533402 RRP12Q5JTH9 1297 aaKnown RBP9.67□□□□□ -0.86
CSRP1-218ENST00000533402 MAPK8IP3Q9UPT6 1336 aa9.67□□□□□ -0.86
CSRP1-218ENST00000533402 HMGN5P82970 282 aaKnown RBP9.67□□□□□ -0.86
CSRP1-218ENST00000533402 CCDC9Q9Y3X0 531 aaKnown RBP9.67□□□□□ -0.86
CSRP1-218ENST00000533402 CLSTN1O94985 981 aa9.67□□□□□ -0.86
CSRP1-218ENST00000533402 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 RWDD1Q9H446 243 aaPredicted RBP9.66□□□□□ -0.86
CSRP1-218ENST00000533402 NASPP49321 788 aaPredicted RBP9.66□□□□□ -0.86
CSRP1-218ENST00000533402 CHIC2Q9UKJ5 165 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 TSPYL1Q9H0U9 437 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 STK11IPQ8N1F8 1099 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 HSP90B2PQ58FF3 399 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
CSRP1-218ENST00000533402 PDCL3Q9H2J4 239 aa9.65□□□□□ -0.86
CSRP1-218ENST00000533402 KIAA0586Q9BVV6 1533 aa9.65□□□□□ -0.86
CSRP1-218ENST00000533402 CCDC191Q8NCU4 936 aa9.65□□□□□ -0.86
CSRP1-218ENST00000533402 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.87
CSRP1-218ENST00000533402 LEKR1Q6ZMV7 388 aa9.65□□□□□ -0.87
CSRP1-218ENST00000533402 HDAC5Q9UQL6 1122 aa9.64□□□□□ -0.87
CSRP1-218ENST00000533402 GOLGA6L19H0YKK7 550 aa9.64□□□□□ -0.87
CSRP1-218ENST00000533402 MEX3CQ5U5Q3 659 aaKnown RBP9.64□□□□□ -0.87
CSRP1-218ENST00000533402 ACBD3Q9H3P7 528 aa9.64□□□□□ -0.87
CSRP1-218ENST00000533402 UQCRHLA0A096LP55 91 aa9.63□□□□□ -0.87
CSRP1-218ENST00000533402 UQCRHP07919 91 aa9.63□□□□□ -0.87
CSRP1-218ENST00000533402 PMFBP1Q8TBY8 1022 aa9.63□□□□□ -0.87
CSRP1-218ENST00000533402 PRDM10Q9NQV6 1147 aa9.63□□□□□ -0.87
CSRP1-218ENST00000533402 ZHX1Q9UKY1 873 aaPredicted RBP9.63□□□□□ -0.87
CSRP1-218ENST00000533402 FHOD3Q2V2M9 1422 aa9.63□□□□□ -0.87
CSRP1-218ENST00000533402 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
CSRP1-218ENST00000533402 IFT57Q9NWB7 429 aa9.62□□□□□ -0.87
CSRP1-218ENST00000533402 HOMER1Q86YM7 354 aa9.62□□□□□ -0.87
CSRP1-218ENST00000533402 CHMP5Q9NZZ3 219 aa9.62□□□□□ -0.87
CSRP1-218ENST00000533402 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
CSRP1-218ENST00000533402 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
CSRP1-218ENST00000533402 ST18O60284 1047 aa9.62□□□□□ -0.87
CSRP1-218ENST00000533402 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
CSRP1-218ENST00000533402 FOXD4L5Q5VV16 416 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms