RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 DHX29Q7Z478 1369 aaKnown RBP30.99■■■□□ 2.55
AP004608.1-202ENST00000533390 HECW2Q9P2P5 1572 aa30.98■■■□□ 2.55
AP004608.1-202ENST00000533390 MLH3Q9UHC1 1453 aa30.95■■■□□ 2.55
AP004608.1-202ENST00000533390 DIP2BQ9P265 1576 aa30.95■■■□□ 2.55
AP004608.1-202ENST00000533390 CCDC144AA2RUR9 1427 aa30.94■■■□□ 2.54
AP004608.1-202ENST00000533390 KANK1Q14678 1352 aa30.93■■■□□ 2.54
AP004608.1-202ENST00000533390 MIER1Q8N108 512 aa30.92■■■□□ 2.54
AP004608.1-202ENST00000533390 HIRIP3Q9BW71 556 aaPredicted RBP30.92■■■□□ 2.54
AP004608.1-202ENST00000533390 KIF3BO15066 747 aa30.91■■■□□ 2.54
AP004608.1-202ENST00000533390 NBPF8Q3BBV2 869 aa30.91■■■□□ 2.54
AP004608.1-202ENST00000533390 FAM69CQ0P6D2 419 aa30.9■■■□□ 2.54
AP004608.1-202ENST00000533390 A2MP01023 1474 aa30.89■■■□□ 2.54
AP004608.1-202ENST00000533390 ATP10AO60312 1499 aa30.88■■■□□ 2.53
AP004608.1-202ENST00000533390 TET3O43151 1660 aa30.88■■■□□ 2.53
AP004608.1-202ENST00000533390 PRDM15P57071 1507 aaPredicted RBP30.88■■■□□ 2.53
AP004608.1-202ENST00000533390 E9PCH4 1651 aa30.88■■■□□ 2.53
AP004608.1-202ENST00000533390 PLA2R1Q13018 1463 aa30.87■■■□□ 2.53
AP004608.1-202ENST00000533390 EIF4G2P78344 907 aaKnown RBP eCLIP30.87■■■□□ 2.53
AP004608.1-202ENST00000533390 VWDEQ8N2E2 1590 aa30.87■■■□□ 2.53
AP004608.1-202ENST00000533390 RICTORQ6R327 1708 aa30.86■■■□□ 2.53
AP004608.1-202ENST00000533390 MROH1Q8NDA8 1641 aa30.83■■■□□ 2.53
AP004608.1-202ENST00000533390 ABCA6Q8N139 1617 aa30.83■■■□□ 2.53
AP004608.1-202ENST00000533390 HSPA5P11021 654 aaKnown RBP30.82■■■□□ 2.53
AP004608.1-202ENST00000533390 RAPGEF3O95398 923 aa30.82■■■□□ 2.52
AP004608.1-202ENST00000533390 UHRF1BP1Q6BDS2 1440 aa30.82■■■□□ 2.52
AP004608.1-202ENST00000533390 TSPOAP1O95153 1857 aa30.81■■■□□ 2.52
AP004608.1-202ENST00000533390 RNF17Q9BXT8 1623 aaKnown RBP30.8■■■□□ 2.52
AP004608.1-202ENST00000533390 SPHKAPQ2M3C7 1700 aa30.79■■■□□ 2.52
AP004608.1-202ENST00000533390 ZNF326Q5BKZ1 582 aaKnown RBP30.78■■■□□ 2.52
AP004608.1-202ENST00000533390 DDX10Q13206 875 aaKnown RBP30.78■■■□□ 2.52
AP004608.1-202ENST00000533390 FRMPD1Q5SYB0 1578 aa30.77■■■□□ 2.52
AP004608.1-202ENST00000533390 BCORL1Q5H9F3 1711 aa30.77■■■□□ 2.52
AP004608.1-202ENST00000533390 DCAF11Q8TEB1 546 aa30.76■■■□□ 2.51
AP004608.1-202ENST00000533390 PPRC1Q5VV67 1664 aaKnown RBP30.75■■■□□ 2.51
AP004608.1-202ENST00000533390 TRPM2O94759 1503 aa30.75■■■□□ 2.51
AP004608.1-202ENST00000533390 DIP2CQ9Y2E4 1556 aa30.74■■■□□ 2.51
AP004608.1-202ENST00000533390 KDM2AQ9Y2K7 1162 aa30.72■■■□□ 2.51
AP004608.1-202ENST00000533390 RALGAPBQ86X10 1494 aa30.71■■■□□ 2.51
AP004608.1-202ENST00000533390 CEP152O94986 1710 aa30.71■■■□□ 2.51
AP004608.1-202ENST00000533390 PTPRTO14522 1441 aa30.71■■■□□ 2.51
AP004608.1-202ENST00000533390 LMTK2Q8IWU2 1503 aa30.7■■■□□ 2.51
AP004608.1-202ENST00000533390 KIF13AQ9H1H9 1805 aa30.69■■■□□ 2.5
AP004608.1-202ENST00000533390 EFCAB6Q5THR3 1501 aa30.68■■■□□ 2.5
AP004608.1-202ENST00000533390 RGL3Q3MIN7 710 aa30.68■■■□□ 2.5
AP004608.1-202ENST00000533390 ZMYM4Q5VZL5 1548 aa30.67■■■□□ 2.5
AP004608.1-202ENST00000533390 SPATA31E1Q6ZUB1 1445 aa30.65■■■□□ 2.5
AP004608.1-202ENST00000533390 CLTCL1P53675 1640 aa30.63■■■□□ 2.49
AP004608.1-202ENST00000533390 GGT6Q6P531 493 aa30.63■■■□□ 2.49
AP004608.1-202ENST00000533390 POLR1AO95602 1720 aaPredicted RBP30.62■■■□□ 2.49
AP004608.1-202ENST00000533390 PRAG1Q86YV5 1406 aa30.61■■■□□ 2.49
AP004608.1-202ENST00000533390 YEATS2Q9ULM3 1422 aa30.61■■■□□ 2.49
AP004608.1-202ENST00000533390 USP47Q96K76 1375 aa30.6■■■□□ 2.49
AP004608.1-202ENST00000533390 TRPM1Q7Z4N2 1603 aa30.6■■■□□ 2.49
AP004608.1-202ENST00000533390 WASHC2AQ641Q2 1341 aa30.58■■■□□ 2.49
AP004608.1-202ENST00000533390 CARD11Q9BXL7 1154 aa30.58■■■□□ 2.49
AP004608.1-202ENST00000533390 ROCK2O75116 1388 aaKnown RBP30.54■■■□□ 2.48
AP004608.1-202ENST00000533390 ABCC3O15438 1527 aa30.54■■■□□ 2.48
AP004608.1-202ENST00000533390 WASHC2CQ9Y4E1 1318 aa30.54■■■□□ 2.48
AP004608.1-202ENST00000533390 KIF1BO60333 1816 aa30.54■■■□□ 2.48
AP004608.1-202ENST00000533390 NEURL4Q96JN8 1562 aa30.53■■■□□ 2.48
AP004608.1-202ENST00000533390 ZC3H13Q5T200 1668 aaKnown RBP30.52■■■□□ 2.48
AP004608.1-202ENST00000533390 CAMSAP1Q5T5Y3 1602 aa30.52■■■□□ 2.48
AP004608.1-202ENST00000533390 CCDC7Q96M83 1385 aa30.52■■■□□ 2.48
AP004608.1-202ENST00000533390 CENPBP07199 599 aaPredicted RBP30.5■■■□□ 2.47
AP004608.1-202ENST00000533390 STAC3Q96MF2 364 aa30.49■■■□□ 2.47
AP004608.1-202ENST00000533390 ANP32CO43423 234 aa30.48■■■□□ 2.47
AP004608.1-202ENST00000533390 NPATQ14207 1427 aa30.48■■■□□ 2.47
AP004608.1-202ENST00000533390 CFAP65Q6ZU64 1925 aaKnown RBP30.48■■■□□ 2.47
AP004608.1-202ENST00000533390 YTHDC1Q96MU7 727 aaKnown RBP30.47■■■□□ 2.47
AP004608.1-202ENST00000533390 LAMC1P11047 1609 aa30.47■■■□□ 2.47
AP004608.1-202ENST00000533390 C11orf95C9JLR9 678 aaPredicted RBP30.46■■■□□ 2.47
AP004608.1-202ENST00000533390 UGGT1Q9NYU2 1555 aa30.45■■■□□ 2.47
AP004608.1-202ENST00000533390 REREQ9P2R6 1566 aa30.45■■■□□ 2.47
AP004608.1-202ENST00000533390 CNTLNQ9NXG0 1405 aa30.43■■■□□ 2.46
AP004608.1-202ENST00000533390 GPRASP1Q5JY77 1395 aa30.43■■■□□ 2.46
AP004608.1-202ENST00000533390 MADDQ8WXG6 1647 aa30.43■■■□□ 2.46
AP004608.1-202ENST00000533390 KIF7Q2M1P5 1343 aa30.42■■■□□ 2.46
AP004608.1-202ENST00000533390 ARID4BQ4LE39 1312 aaPredicted RBP30.39■■■□□ 2.46
AP004608.1-202ENST00000533390 NBPF1Q3BBV0 1214 aa30.38■■■□□ 2.45
AP004608.1-202ENST00000533390 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
AP004608.1-202ENST00000533390 ARHGAP31Q2M1Z3 1444 aa30.37■■■□□ 2.45
AP004608.1-202ENST00000533390 AGLP35573 1532 aa30.37■■■□□ 2.45
AP004608.1-202ENST00000533390 SIGLEC1Q9BZZ2 1709 aa30.35■■■□□ 2.45
AP004608.1-202ENST00000533390 ST20-MTHFSA0A0A6YYL1 179 aa30.35■■■□□ 2.45
AP004608.1-202ENST00000533390 COL17A1Q9UMD9 1497 aaPredicted RBP30.35■■■□□ 2.45
AP004608.1-202ENST00000533390 IFT172Q9UG01 1749 aa30.35■■■□□ 2.45
AP004608.1-202ENST00000533390 ADGRB3O60242 1522 aa30.34■■■□□ 2.45
AP004608.1-202ENST00000533390 ARHGEF40Q8TER5 1519 aa30.34■■■□□ 2.45
AP004608.1-202ENST00000533390 NOS1P29475 1434 aa30.34■■■□□ 2.45
AP004608.1-202ENST00000533390 MYOM2P54296 1465 aa30.32■■■□□ 2.44
AP004608.1-202ENST00000533390 CCER2I3L3R5 266 aa30.31■■■□□ 2.44
AP004608.1-202ENST00000533390 KIAA1210Q9ULL0 1709 aa30.3■■■□□ 2.44
AP004608.1-202ENST00000533390 CHGAP10645 457 aaKnown RBP30.29■■■□□ 2.44
AP004608.1-202ENST00000533390 PIK3C2BO00750 1634 aa30.28■■■□□ 2.44
AP004608.1-202ENST00000533390 PPP6R1Q9UPN7 881 aa30.27■■■□□ 2.44
AP004608.1-202ENST00000533390 SYNMO15061 1565 aa30.27■■■□□ 2.44
AP004608.1-202ENST00000533390 POLR3GLQ9BT43 218 aa30.26■■■□□ 2.43
AP004608.1-202ENST00000533390 PREX1Q8TCU6 1659 aa30.25■■■□□ 2.43
AP004608.1-202ENST00000533390 PPLO60437 1756 aa30.23■■■□□ 2.43
AP004608.1-202ENST00000533390 IQGAP1P46940 1657 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms