RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 KDM4CQ9H3R0 1056 aa9.75□□□□□ -0.85
CASP4-211ENST00000533252 FOSBP53539 338 aa9.74□□□□□ -0.85
CASP4-211ENST00000533252 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
CASP4-211ENST00000533252 ZNF710Q8N1W2 664 aa9.74□□□□□ -0.85
CASP4-211ENST00000533252 ABCC9O60706 1549 aa9.72□□□□□ -0.85
CASP4-211ENST00000533252 MAMSTRQ6ZN01 415 aa9.72□□□□□ -0.85
CASP4-211ENST00000533252 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
CASP4-211ENST00000533252 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
CASP4-211ENST00000533252 LHX6Q9UPM6 363 aa9.72□□□□□ -0.85
CASP4-211ENST00000533252 C6orf132Q5T0Z8 1188 aa9.71□□□□□ -0.86
CASP4-211ENST00000533252 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
CASP4-211ENST00000533252 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
CASP4-211ENST00000533252 NLRP7Q8WX94 980 aa9.69□□□□□ -0.86
CASP4-211ENST00000533252 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
CASP4-211ENST00000533252 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
CASP4-211ENST00000533252 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
CASP4-211ENST00000533252 OTUD5Q96G74 571 aa9.68□□□□□ -0.86
CASP4-211ENST00000533252 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
CASP4-211ENST00000533252 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
CASP4-211ENST00000533252 TIMELESSQ9UNS1 1208 aa9.67□□□□□ -0.86
CASP4-211ENST00000533252 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
CASP4-211ENST00000533252 PHOX2BQ99453 314 aa9.66□□□□□ -0.86
CASP4-211ENST00000533252 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
CASP4-211ENST00000533252 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
CASP4-211ENST00000533252 AMHR2Q16671 573 aa9.64□□□□□ -0.87
CASP4-211ENST00000533252 COL9A1P20849 921 aa9.63□□□□□ -0.87
CASP4-211ENST00000533252 MDM2Q00987 491 aaPredicted RBP9.63□□□□□ -0.87
CASP4-211ENST00000533252 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
CASP4-211ENST00000533252 FAM198AQ9UFP1 575 aa9.61□□□□□ -0.87
CASP4-211ENST00000533252 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
CASP4-211ENST00000533252 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
CASP4-211ENST00000533252 SNPHO15079 494 aa9.59□□□□□ -0.87
CASP4-211ENST00000533252 MS4A1P11836 297 aa9.59□□□□□ -0.87
CASP4-211ENST00000533252 PRSS12P56730 875 aa9.59□□□□□ -0.87
CASP4-211ENST00000533252 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
CASP4-211ENST00000533252 CDCA7LQ96GN5 454 aa9.59□□□□□ -0.87
CASP4-211ENST00000533252 ADGRG1Q9Y653 693 aa9.59□□□□□ -0.87
CASP4-211ENST00000533252 LHX8Q68G74 356 aa9.58□□□□□ -0.88
CASP4-211ENST00000533252 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
CASP4-211ENST00000533252 METTL3Q86U44 580 aaKnown RBP9.56□□□□□ -0.88
CASP4-211ENST00000533252 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
CASP4-211ENST00000533252 CERKQ8TCT0 537 aa9.56□□□□□ -0.88
CASP4-211ENST00000533252 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
CASP4-211ENST00000533252 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
CASP4-211ENST00000533252 TSKSQ9UJT2 592 aa9.55□□□□□ -0.88
CASP4-211ENST00000533252 PTPREP23469 700 aa9.54□□□□□ -0.88
CASP4-211ENST00000533252 C14orf37Q86TY3 774 aa9.54□□□□□ -0.88
CASP4-211ENST00000533252 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
CASP4-211ENST00000533252 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
CASP4-211ENST00000533252 SMAPO00193 183 aa9.53□□□□□ -0.88
CASP4-211ENST00000533252 OATP04181 439 aa9.53□□□□□ -0.88
CASP4-211ENST00000533252 SSTR3P32745 418 aaPredicted RBP9.53□□□□□ -0.88
CASP4-211ENST00000533252 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
CASP4-211ENST00000533252 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
CASP4-211ENST00000533252 CLCN1P35523 988 aa9.52□□□□□ -0.89
CASP4-211ENST00000533252 MARVELD3Q96A59 401 aa9.52□□□□□ -0.89
CASP4-211ENST00000533252 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
CASP4-211ENST00000533252 PSEN2P49810 448 aa9.51□□□□□ -0.89
CASP4-211ENST00000533252 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
CASP4-211ENST00000533252 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
CASP4-211ENST00000533252 NUDT18Q6ZVK8 323 aa9.5□□□□□ -0.89
CASP4-211ENST00000533252 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
CASP4-211ENST00000533252 ERBB3P21860 1342 aa9.5□□□□□ -0.89
CASP4-211ENST00000533252 ST18O60284 1047 aa9.49□□□□□ -0.89
CASP4-211ENST00000533252 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
CASP4-211ENST00000533252 RBM46Q8TBY0 533 aaKnown RBP9.49□□□□□ -0.89
CASP4-211ENST00000533252 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
CASP4-211ENST00000533252 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
CASP4-211ENST00000533252 POTEEQ6S8J3 1075 aa9.48□□□□□ -0.89
CASP4-211ENST00000533252 EYA1Q99502 592 aa9.48□□□□□ -0.89
CASP4-211ENST00000533252 BEGAINQ9BUH8 593 aa9.48□□□□□ -0.89
CASP4-211ENST00000533252 FAM217BQ9NTX9 383 aaPredicted RBP9.48□□□□□ -0.89
CASP4-211ENST00000533252 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
CASP4-211ENST00000533252 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
CASP4-211ENST00000533252 TATDN2Q93075 761 aa9.47□□□□□ -0.89
CASP4-211ENST00000533252 FAM163AQ96GL9 167 aaPredicted RBP9.47□□□□□ -0.89
CASP4-211ENST00000533252 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
CASP4-211ENST00000533252 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
CASP4-211ENST00000533252 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
CASP4-211ENST00000533252 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
CASP4-211ENST00000533252 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
CASP4-211ENST00000533252 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
CASP4-211ENST00000533252 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
CASP4-211ENST00000533252 EMP3P54852 163 aa9.43□□□□□ -0.9
CASP4-211ENST00000533252 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
CASP4-211ENST00000533252 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
CASP4-211ENST00000533252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
CASP4-211ENST00000533252 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
CASP4-211ENST00000533252 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
CASP4-211ENST00000533252 NBPF26B4DH59 902 aa9.41□□□□□ -0.9
CASP4-211ENST00000533252 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
CASP4-211ENST00000533252 SEPT9Q9UHD8 586 aaPredicted RBP9.41□□□□□ -0.9
CASP4-211ENST00000533252 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.9
CASP4-211ENST00000533252 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
CASP4-211ENST00000533252 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
CASP4-211ENST00000533252 DNAJB2P25686 324 aa9.38□□□□□ -0.91
CASP4-211ENST00000533252 SH3D19Q5HYK7 790 aa9.38□□□□□ -0.91
CASP4-211ENST00000533252 TBC1D2Q9BYX2 928 aa9.38□□□□□ -0.91
CASP4-211ENST00000533252 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
CASP4-211ENST00000533252 MYSM1Q5VVJ2 828 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms