RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 NEFLP07196 543 aa11.45□□□□□ -0.58
TRIM53BP-201ENST00000532912 IQGAP3Q86VI3 1631 aa11.45□□□□□ -0.58
TRIM53BP-201ENST00000532912 UHRF1BP1LA0JNW5 1464 aa11.44□□□□□ -0.58
TRIM53BP-201ENST00000532912 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
TRIM53BP-201ENST00000532912 TRPM1Q7Z4N2 1603 aa11.43□□□□□ -0.58
TRIM53BP-201ENST00000532912 E9PCH4 1651 aa11.43□□□□□ -0.58
TRIM53BP-201ENST00000532912 ZBED9Q6R2W3 1325 aa11.42□□□□□ -0.58
TRIM53BP-201ENST00000532912 MRS2Q9HD23 443 aa11.42□□□□□ -0.58
TRIM53BP-201ENST00000532912 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
TRIM53BP-201ENST00000532912 ATP10AO60312 1499 aa11.42□□□□□ -0.58
TRIM53BP-201ENST00000532912 PLCH2O75038 1416 aa11.41□□□□□ -0.58
TRIM53BP-201ENST00000532912 PRAG1Q86YV5 1406 aa11.41□□□□□ -0.58
TRIM53BP-201ENST00000532912 DUOX2Q9NRD8 1548 aa11.41□□□□□ -0.58
TRIM53BP-201ENST00000532912 ZNF326Q5BKZ1 582 aaKnown RBP11.41□□□□□ -0.58
TRIM53BP-201ENST00000532912 ABCC1P33527 1531 aa11.41□□□□□ -0.58
TRIM53BP-201ENST00000532912 LAMC1P11047 1609 aa11.4□□□□□ -0.58
TRIM53BP-201ENST00000532912 ERBINQ96RT1 1412 aa11.4□□□□□ -0.58
TRIM53BP-201ENST00000532912 GPRASP1Q5JY77 1395 aa11.4□□□□□ -0.58
TRIM53BP-201ENST00000532912 CARD11Q9BXL7 1154 aa11.4□□□□□ -0.58
TRIM53BP-201ENST00000532912 A2MP01023 1474 aa11.39□□□□□ -0.59
TRIM53BP-201ENST00000532912 CCDC144AA2RUR9 1427 aa11.39□□□□□ -0.59
TRIM53BP-201ENST00000532912 FAM9BQ8IZU0 186 aa11.38□□□□□ -0.59
TRIM53BP-201ENST00000532912 ARAP3Q8WWN8 1544 aa11.38□□□□□ -0.59
TRIM53BP-201ENST00000532912 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
TRIM53BP-201ENST00000532912 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
TRIM53BP-201ENST00000532912 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
TRIM53BP-201ENST00000532912 ERICH6BQ5W0A0 696 aa11.36□□□□□ -0.59
TRIM53BP-201ENST00000532912 TRAPPC8Q9Y2L5 1435 aa11.36□□□□□ -0.59
TRIM53BP-201ENST00000532912 KDM2AQ9Y2K7 1162 aa11.35□□□□□ -0.59
TRIM53BP-201ENST00000532912 RNF17Q9BXT8 1623 aaKnown RBP11.34□□□□□ -0.59
TRIM53BP-201ENST00000532912 EIF2AK4Q9P2K8 1649 aaKnown RBP11.34□□□□□ -0.59
TRIM53BP-201ENST00000532912 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
TRIM53BP-201ENST00000532912 SMG6Q86US8 1419 aaKnown RBP11.34□□□□□ -0.59
TRIM53BP-201ENST00000532912 ZFYVE16Q7Z3T8 1539 aa11.33□□□□□ -0.6
TRIM53BP-201ENST00000532912 RTEL1-TNFRSF6BF6WH68 1400 aa11.33□□□□□ -0.6
TRIM53BP-201ENST00000532912 COL17A1Q9UMD9 1497 aaPredicted RBP11.33□□□□□ -0.6
TRIM53BP-201ENST00000532912 EFCAB2Q5VUJ9 269 aa11.32□□□□□ -0.6
TRIM53BP-201ENST00000532912 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
TRIM53BP-201ENST00000532912 LRPPRCP42704 1394 aaKnown RBP11.32□□□□□ -0.6
TRIM53BP-201ENST00000532912 DEPDC5O75140 1603 aa11.32□□□□□ -0.6
TRIM53BP-201ENST00000532912 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
TRIM53BP-201ENST00000532912 MYT1Q01538 1121 aa11.31□□□□□ -0.6
TRIM53BP-201ENST00000532912 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
TRIM53BP-201ENST00000532912 ABCA9Q8IUA7 1624 aa11.31□□□□□ -0.6
TRIM53BP-201ENST00000532912 BRD4O60885 1362 aaPredicted RBP11.3□□□□□ -0.6
TRIM53BP-201ENST00000532912 POLR3GLQ9BT43 218 aa11.3□□□□□ -0.6
TRIM53BP-201ENST00000532912 VWDEQ8N2E2 1590 aa11.3□□□□□ -0.6
TRIM53BP-201ENST00000532912 INO80Q9ULG1 1556 aaPredicted RBP11.3□□□□□ -0.6
TRIM53BP-201ENST00000532912 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
TRIM53BP-201ENST00000532912 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 TESK2Q96S53 571 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 TRPM2O94759 1503 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 PTPRTO14522 1441 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 MYBBP1AQ9BQG0 1328 aaKnown RBP11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 RALBP1Q15311 655 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 MADDQ8WXG6 1647 aa11.29□□□□□ -0.6
TRIM53BP-201ENST00000532912 WDR7Q9Y4E6 1490 aa11.28□□□□□ -0.6
TRIM53BP-201ENST00000532912 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
TRIM53BP-201ENST00000532912 RGL3Q3MIN7 710 aa11.28□□□□□ -0.6
TRIM53BP-201ENST00000532912 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.6
TRIM53BP-201ENST00000532912 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
TRIM53BP-201ENST00000532912 CEP152O94986 1710 aa11.27□□□□□ -0.61
TRIM53BP-201ENST00000532912 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
TRIM53BP-201ENST00000532912 TET3O43151 1660 aa11.26□□□□□ -0.61
TRIM53BP-201ENST00000532912 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
TRIM53BP-201ENST00000532912 CLTCL1P53675 1640 aa11.26□□□□□ -0.61
TRIM53BP-201ENST00000532912 NEURL4Q96JN8 1562 aa11.25□□□□□ -0.61
TRIM53BP-201ENST00000532912 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
TRIM53BP-201ENST00000532912 SPAG9O60271 1321 aaKnown RBP11.25□□□□□ -0.61
TRIM53BP-201ENST00000532912 MROH1Q8NDA8 1641 aa11.25□□□□□ -0.61
TRIM53BP-201ENST00000532912 AFAP1Q8N556 730 aa11.24□□□□□ -0.61
TRIM53BP-201ENST00000532912 TMC1Q8TDI8 760 aa11.24□□□□□ -0.61
TRIM53BP-201ENST00000532912 FANCAO15360 1455 aa11.24□□□□□ -0.61
TRIM53BP-201ENST00000532912 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
TRIM53BP-201ENST00000532912 CNGB1Q14028 1251 aaPredicted RBP11.23□□□□□ -0.61
TRIM53BP-201ENST00000532912 ZMYM4Q5VZL5 1548 aa11.23□□□□□ -0.61
TRIM53BP-201ENST00000532912 INSRP06213 1382 aa11.23□□□□□ -0.61
TRIM53BP-201ENST00000532912 SCAPERQ9BY12 1400 aa11.22□□□□□ -0.61
TRIM53BP-201ENST00000532912 NLRP13Q86W25 1043 aa11.22□□□□□ -0.61
TRIM53BP-201ENST00000532912 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
TRIM53BP-201ENST00000532912 ADGRL1O94910 1474 aa11.2□□□□□ -0.62
TRIM53BP-201ENST00000532912 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
TRIM53BP-201ENST00000532912 TMF1P82094 1093 aa11.19□□□□□ -0.62
TRIM53BP-201ENST00000532912 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
TRIM53BP-201ENST00000532912 KIDINS220Q9ULH0 1771 aa11.19□□□□□ -0.62
TRIM53BP-201ENST00000532912 BLMP54132 1417 aaPredicted RBP11.18□□□□□ -0.62
TRIM53BP-201ENST00000532912 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
TRIM53BP-201ENST00000532912 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
TRIM53BP-201ENST00000532912 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
TRIM53BP-201ENST00000532912 SYNMO15061 1565 aa11.18□□□□□ -0.62
TRIM53BP-201ENST00000532912 PANK3Q9H999 370 aa11.18□□□□□ -0.62
TRIM53BP-201ENST00000532912 EFCAB6Q5THR3 1501 aa11.17□□□□□ -0.62
TRIM53BP-201ENST00000532912 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
TRIM53BP-201ENST00000532912 MYOM2P54296 1465 aa11.17□□□□□ -0.62
TRIM53BP-201ENST00000532912 MYOM1P52179 1685 aa11.17□□□□□ -0.62
TRIM53BP-201ENST00000532912 IFT172Q9UG01 1749 aa11.17□□□□□ -0.62
TRIM53BP-201ENST00000532912 FANCIQ9NVI1 1328 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms