RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-232ENST00000532649 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-232ENST00000532649 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
CTNND1-232ENST00000532649 CASKIN1Q8WXD9 1431 aa11.07□□□□□ -0.64
CTNND1-232ENST00000532649 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
CTNND1-232ENST00000532649 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
CTNND1-232ENST00000532649 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-232ENST00000532649 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
CTNND1-232ENST00000532649 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
CTNND1-232ENST00000532649 GNL2Q13823 731 aaKnown RBP11.06□□□□□ -0.64
CTNND1-232ENST00000532649 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
CTNND1-232ENST00000532649 ERICH3Q5RHP9 1530 aa11.05□□□□□ -0.64
CTNND1-232ENST00000532649 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
CTNND1-232ENST00000532649 NCOA2Q15596 1464 aa11.05□□□□□ -0.64
CTNND1-232ENST00000532649 TOP2BQ02880 1626 aa11.05□□□□□ -0.64
CTNND1-232ENST00000532649 NAP1L5Q96NT1 182 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-232ENST00000532649 PHLDB1Q86UU1 1377 aa11.05□□□□□ -0.64
CTNND1-232ENST00000532649 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
CTNND1-232ENST00000532649 PANK3Q9H999 370 aa11.04□□□□□ -0.64
CTNND1-232ENST00000532649 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
CTNND1-232ENST00000532649 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
CTNND1-232ENST00000532649 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
CTNND1-232ENST00000532649 APBB1O00213 710 aa11.03□□□□□ -0.64
CTNND1-232ENST00000532649 HSP90AB1P08238 724 aaKnown RBP11.03□□□□□ -0.64
CTNND1-232ENST00000532649 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
CTNND1-232ENST00000532649 COG3Q96JB2 828 aa11.02□□□□□ -0.65
CTNND1-232ENST00000532649 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
CTNND1-232ENST00000532649 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.02□□□□□ -0.65
CTNND1-232ENST00000532649 USP47Q96K76 1375 aa11.02□□□□□ -0.65
CTNND1-232ENST00000532649 ANKRD50Q9ULJ7 1429 aa11.02□□□□□ -0.65
CTNND1-232ENST00000532649 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
CTNND1-232ENST00000532649 RCAN3Q9UKA8 241 aa11.01□□□□□ -0.65
CTNND1-232ENST00000532649 AEBP2Q6ZN18 517 aaPredicted RBP11.01□□□□□ -0.65
CTNND1-232ENST00000532649 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
CTNND1-232ENST00000532649 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
CTNND1-232ENST00000532649 CGNL1Q0VF96 1302 aa11□□□□□ -0.65
CTNND1-232ENST00000532649 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
CTNND1-232ENST00000532649 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
CTNND1-232ENST00000532649 ARAP1Q96P48 1450 aa11□□□□□ -0.65
CTNND1-232ENST00000532649 MCCP23508 829 aa11□□□□□ -0.65
CTNND1-232ENST00000532649 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
CTNND1-232ENST00000532649 G3V3G9 751 aa10.99□□□□□ -0.65
CTNND1-232ENST00000532649 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
CTNND1-232ENST00000532649 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
CTNND1-232ENST00000532649 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
CTNND1-232ENST00000532649 EVA1CP58658 441 aa10.98□□□□□ -0.65
CTNND1-232ENST00000532649 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
CTNND1-232ENST00000532649 RRP7AQ9Y3A4 280 aaKnown RBP10.97□□□□□ -0.65
CTNND1-232ENST00000532649 CHMP3Q9Y3E7 222 aa10.97□□□□□ -0.65
CTNND1-232ENST00000532649 A0A0U1RQG5 324 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-232ENST00000532649 PSME1Q06323 249 aa10.97□□□□□ -0.65
CTNND1-232ENST00000532649 SLC4A10Q6U841 1118 aa10.96□□□□□ -0.65
CTNND1-232ENST00000532649 ERICH6BQ5W0A0 696 aa10.96□□□□□ -0.65
CTNND1-232ENST00000532649 PRXQ9BXM0 1461 aa10.96□□□□□ -0.66
CTNND1-232ENST00000532649 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-232ENST00000532649 PDE4CQ08493 712 aa10.95□□□□□ -0.66
CTNND1-232ENST00000532649 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
CTNND1-232ENST00000532649 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
CTNND1-232ENST00000532649 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
CTNND1-232ENST00000532649 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
CTNND1-232ENST00000532649 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
CTNND1-232ENST00000532649 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-232ENST00000532649 ATF3P18847 181 aa10.93□□□□□ -0.66
CTNND1-232ENST00000532649 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
CTNND1-232ENST00000532649 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-232ENST00000532649 TMEM132EQ6IEE7 984 aa10.93□□□□□ -0.66
CTNND1-232ENST00000532649 GORABQ5T7V8 394 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 HSCBQ8IWL3 235 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 PLEKHH2Q8IVE3 1493 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 KIAA1211Q6ZU35 1233 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 HDAC5Q9UQL6 1122 aa10.92□□□□□ -0.66
CTNND1-232ENST00000532649 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
CTNND1-232ENST00000532649 KIAA0586Q9BVV6 1533 aa10.91□□□□□ -0.66
CTNND1-232ENST00000532649 PDE3BQ13370 1112 aa10.91□□□□□ -0.66
CTNND1-232ENST00000532649 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
CTNND1-232ENST00000532649 ELL2O00472 640 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-232ENST00000532649 RAPGEF3O95398 923 aa10.91□□□□□ -0.66
CTNND1-232ENST00000532649 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-232ENST00000532649 TEFQ10587 303 aa10.9□□□□□ -0.66
CTNND1-232ENST00000532649 HMMRO75330 724 aa10.9□□□□□ -0.66
CTNND1-232ENST00000532649 TPM4P67936 248 aa10.9□□□□□ -0.66
CTNND1-232ENST00000532649 MEX3CQ5U5Q3 659 aaKnown RBP10.9□□□□□ -0.66
CTNND1-232ENST00000532649 TXNDC2Q86VQ3 553 aa10.9□□□□□ -0.66
CTNND1-232ENST00000532649 PMFBP1Q8TBY8 1022 aa10.9□□□□□ -0.66
CTNND1-232ENST00000532649 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-232ENST00000532649 DIAPH1O60610 1272 aaKnown RBP10.9□□□□□ -0.67
CTNND1-232ENST00000532649 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
CTNND1-232ENST00000532649 MSNP26038 577 aaKnown RBP10.89□□□□□ -0.67
CTNND1-232ENST00000532649 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
CTNND1-232ENST00000532649 IQGAP2Q13576 1575 aa10.89□□□□□ -0.67
CTNND1-232ENST00000532649 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
CTNND1-232ENST00000532649 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
CTNND1-232ENST00000532649 GPATCH3Q96I76 525 aa10.88□□□□□ -0.67
CTNND1-232ENST00000532649 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 CFAP70Q5T0N1 1121 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 TTC5Q8N0Z6 440 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms