RNA–Protein interactions for RNA: ENST00000532419.5

TCN1-203, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-203ENST00000532419 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
TCN1-203ENST00000532419 ANO8Q9HCE9 1232 aaPredicted RBP9.74□□□□□ -0.85
TCN1-203ENST00000532419 NCKAP5LQ9HCH0 1330 aa9.74□□□□□ -0.85
TCN1-203ENST00000532419 A0A0G2JS52 829 aa9.73□□□□□ -0.85
TCN1-203ENST00000532419 EVI5O60447 810 aa9.73□□□□□ -0.85
TCN1-203ENST00000532419 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
TCN1-203ENST00000532419 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
TCN1-203ENST00000532419 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
TCN1-203ENST00000532419 MFSD10Q14728 455 aa9.69□□□□□ -0.86
TCN1-203ENST00000532419 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
TCN1-203ENST00000532419 EIF4G1Q04637 1599 aaKnown RBP9.68□□□□□ -0.86
TCN1-203ENST00000532419 MAP3K9P80192 1104 aa9.68□□□□□ -0.86
TCN1-203ENST00000532419 SCRIBQ14160 1630 aa9.67□□□□□ -0.86
TCN1-203ENST00000532419 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
TCN1-203ENST00000532419 ANKK1Q8NFD2 765 aa9.65□□□□□ -0.86
TCN1-203ENST00000532419 PPP1R3GB7ZBB8 358 aa9.64□□□□□ -0.87
TCN1-203ENST00000532419 RABGEF1Q9UJ41 708 aa9.64□□□□□ -0.87
TCN1-203ENST00000532419 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
TCN1-203ENST00000532419 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
TCN1-203ENST00000532419 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
TCN1-203ENST00000532419 COL9A1P20849 921 aa9.6□□□□□ -0.87
TCN1-203ENST00000532419 BCAMP50895 628 aa9.59□□□□□ -0.87
TCN1-203ENST00000532419 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
TCN1-203ENST00000532419 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
TCN1-203ENST00000532419 TYW1BQ6NUM6 668 aa9.58□□□□□ -0.88
TCN1-203ENST00000532419 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
TCN1-203ENST00000532419 SOWAHBA6NEL2 793 aa9.57□□□□□ -0.88
TCN1-203ENST00000532419 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
TCN1-203ENST00000532419 LAPTM4BQ86VI4 370 aa9.57□□□□□ -0.88
TCN1-203ENST00000532419 ZCCHC6Q5VYS8 1495 aaKnown RBP9.57□□□□□ -0.88
TCN1-203ENST00000532419 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
TCN1-203ENST00000532419 WDR70Q9NW82 654 aa9.56□□□□□ -0.88
TCN1-203ENST00000532419 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
TCN1-203ENST00000532419 PHF14O94880 888 aa9.55□□□□□ -0.88
TCN1-203ENST00000532419 NYAP1Q6ZVC0 841 aa9.55□□□□□ -0.88
TCN1-203ENST00000532419 ZFRQ96KR1 1074 aaKnown RBP9.55□□□□□ -0.88
TCN1-203ENST00000532419 Q6ZNB5 142 aa9.54□□□□□ -0.88
TCN1-203ENST00000532419 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
TCN1-203ENST00000532419 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
TCN1-203ENST00000532419 KCNC4Q03721 635 aa9.52□□□□□ -0.89
TCN1-203ENST00000532419 SEPT9Q9UHD8 586 aaPredicted RBP9.52□□□□□ -0.89
TCN1-203ENST00000532419 ONECUT3O60422 494 aaPredicted RBP9.51□□□□□ -0.89
TCN1-203ENST00000532419 E2F4Q16254 413 aa9.5□□□□□ -0.89
TCN1-203ENST00000532419 C6orf132Q5T0Z8 1188 aa9.5□□□□□ -0.89
TCN1-203ENST00000532419 EPAS1Q99814 870 aa9.49□□□□□ -0.89
TCN1-203ENST00000532419 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
TCN1-203ENST00000532419 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
TCN1-203ENST00000532419 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
TCN1-203ENST00000532419 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
TCN1-203ENST00000532419 LRCH3Q96II8 777 aa9.46□□□□□ -0.9
TCN1-203ENST00000532419 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
TCN1-203ENST00000532419 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
TCN1-203ENST00000532419 ARIH1Q9Y4X5 557 aaPredicted RBP9.46□□□□□ -0.9
TCN1-203ENST00000532419 DPYSL4O14531 572 aa9.45□□□□□ -0.9
TCN1-203ENST00000532419 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
TCN1-203ENST00000532419 LAPTM4AQ15012 233 aa9.42□□□□□ -0.9
TCN1-203ENST00000532419 DDX12PQ92771 950 aa9.41□□□□□ -0.9
TCN1-203ENST00000532419 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
TCN1-203ENST00000532419 PDIA6Q15084 440 aa9.4□□□□□ -0.9
TCN1-203ENST00000532419 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
TCN1-203ENST00000532419 CUX2O14529 1486 aa9.39□□□□□ -0.91
TCN1-203ENST00000532419 GFRA3O60609 400 aa9.38□□□□□ -0.91
TCN1-203ENST00000532419 PPP4CP60510 307 aa9.38□□□□□ -0.91
TCN1-203ENST00000532419 P3H3Q8IVL6 736 aa9.38□□□□□ -0.91
TCN1-203ENST00000532419 ARHGEF1Q92888 912 aaKnown RBP9.37□□□□□ -0.91
TCN1-203ENST00000532419 ERCC6Q03468 1493 aa9.36□□□□□ -0.91
TCN1-203ENST00000532419 MAP3K7O43318 606 aa9.36□□□□□ -0.91
TCN1-203ENST00000532419 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
TCN1-203ENST00000532419 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
TCN1-203ENST00000532419 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
TCN1-203ENST00000532419 NBR1Q14596 966 aa9.35□□□□□ -0.91
TCN1-203ENST00000532419 TSR1Q2NL82 804 aaKnown RBP9.35□□□□□ -0.91
TCN1-203ENST00000532419 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
TCN1-203ENST00000532419 KCNV2Q8TDN2 545 aa9.33□□□□□ -0.92
TCN1-203ENST00000532419 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
TCN1-203ENST00000532419 SMAPO00193 183 aa9.32□□□□□ -0.92
TCN1-203ENST00000532419 LCE2BO14633 110 aa9.32□□□□□ -0.92
TCN1-203ENST00000532419 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
TCN1-203ENST00000532419 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
TCN1-203ENST00000532419 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
TCN1-203ENST00000532419 MTRQ99707 1265 aa9.29□□□□□ -0.92
TCN1-203ENST00000532419 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
TCN1-203ENST00000532419 NRG2O14511 850 aaPredicted RBP9.28□□□□□ -0.92
TCN1-203ENST00000532419 PRSS12P56730 875 aa9.28□□□□□ -0.92
TCN1-203ENST00000532419 PPP1R18Q6NYC8 613 aa9.28□□□□□ -0.92
TCN1-203ENST00000532419 CERKQ8TCT0 537 aa9.26□□□□□ -0.93
TCN1-203ENST00000532419 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
TCN1-203ENST00000532419 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
TCN1-203ENST00000532419 V9GY48 417 aaPredicted RBP9.26□□□□□ -0.93
TCN1-203ENST00000532419 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
TCN1-203ENST00000532419 RNF40O75150 1001 aa9.25□□□□□ -0.93
TCN1-203ENST00000532419 TATDN2Q93075 761 aa9.25□□□□□ -0.93
TCN1-203ENST00000532419 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
TCN1-203ENST00000532419 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
TCN1-203ENST00000532419 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
TCN1-203ENST00000532419 ZNF516Q92618 1163 aa9.24□□□□□ -0.93
TCN1-203ENST00000532419 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
TCN1-203ENST00000532419 NESP48681 1621 aa9.23□□□□□ -0.93
TCN1-203ENST00000532419 NCAPD3P42695 1498 aa9.23□□□□□ -0.93
TCN1-203ENST00000532419 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms