RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 RPGRIP1LQ68CZ1 1315 aa15.19■□□□□ 0.02
CSRP1-215ENST00000532313 SALL2Q9Y467 1007 aaPredicted RBP15.18■□□□□ 0.02
CSRP1-215ENST00000532313 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
CSRP1-215ENST00000532313 ASXL2Q76L83 1435 aa15.17■□□□□ 0.02
CSRP1-215ENST00000532313 COG3Q96JB2 828 aa15.17■□□□□ 0.02
CSRP1-215ENST00000532313 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
CSRP1-215ENST00000532313 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
CSRP1-215ENST00000532313 HFM1A2PYH4 1435 aa15.17■□□□□ 0.02
CSRP1-215ENST00000532313 EIF5BO60841 1220 aaKnown RBP15.16■□□□□ 0.02
CSRP1-215ENST00000532313 CCDC141Q6ZP82 1450 aa15.15■□□□□ 0.02
CSRP1-215ENST00000532313 FANCAO15360 1455 aa15.15■□□□□ 0.02
CSRP1-215ENST00000532313 KTN1Q86UP2 1357 aaKnown RBP15.15■□□□□ 0.02
CSRP1-215ENST00000532313 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
CSRP1-215ENST00000532313 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
CSRP1-215ENST00000532313 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
CSRP1-215ENST00000532313 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
CSRP1-215ENST00000532313 NUTM2FA1L443 756 aa15.14■□□□□ 0.01
CSRP1-215ENST00000532313 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
CSRP1-215ENST00000532313 UPF2Q9HAU5 1272 aaKnown RBP15.13■□□□□ 0.01
CSRP1-215ENST00000532313 WDR7Q9Y4E6 1490 aa15.13■□□□□ 0.01
CSRP1-215ENST00000532313 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
CSRP1-215ENST00000532313 HIRIP3Q9BW71 556 aaPredicted RBP15.12■□□□□ 0.01
CSRP1-215ENST00000532313 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
CSRP1-215ENST00000532313 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
CSRP1-215ENST00000532313 L3MBTL2Q969R5 705 aa15.1■□□□□ 0.01
CSRP1-215ENST00000532313 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
CSRP1-215ENST00000532313 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
CSRP1-215ENST00000532313 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
CSRP1-215ENST00000532313 CENPJQ9HC77 1338 aaPredicted RBP15.09■□□□□ 0.01
CSRP1-215ENST00000532313 RALBP1Q15311 655 aa15.09■□□□□ 0.01
CSRP1-215ENST00000532313 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
CSRP1-215ENST00000532313 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
CSRP1-215ENST00000532313 ARHGEF11O15085 1522 aa15.08■□□□□ 0
CSRP1-215ENST00000532313 NUP160Q12769 1436 aa15.08■□□□□ 0
CSRP1-215ENST00000532313 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
CSRP1-215ENST00000532313 FTSJ3Q8IY81 847 aaKnown RBP15.07■□□□□ 0
CSRP1-215ENST00000532313 NEUROD2Q15784 382 aa15.07■□□□□ 0
CSRP1-215ENST00000532313 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
CSRP1-215ENST00000532313 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
CSRP1-215ENST00000532313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
CSRP1-215ENST00000532313 ABCC2Q92887 1545 aa15.05■□□□□ 0
CSRP1-215ENST00000532313 TOM1O60784 492 aa15.05■□□□□ 0
CSRP1-215ENST00000532313 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ -0
CSRP1-215ENST00000532313 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ -0
CSRP1-215ENST00000532313 ESCO1Q5FWF5 840 aa15.04■□□□□ -0
CSRP1-215ENST00000532313 CDK13Q14004 1512 aaKnown RBP15.04■□□□□ -0
CSRP1-215ENST00000532313 PIP4K2BP78356 416 aa15.03■□□□□ -0
CSRP1-215ENST00000532313 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
CSRP1-215ENST00000532313 PLCH2O75038 1416 aa15.02■□□□□ -0
CSRP1-215ENST00000532313 ZNF518AQ6AHZ1 1483 aa15.02■□□□□ -0
CSRP1-215ENST00000532313 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
CSRP1-215ENST00000532313 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
CSRP1-215ENST00000532313 RAPGEF4Q8WZA2 1011 aa15.01□□□□□ -0.01
CSRP1-215ENST00000532313 GTF2E1P29083 439 aaPredicted RBP15.01□□□□□ -0.01
CSRP1-215ENST00000532313 ROCK1Q13464 1354 aa15.01□□□□□ -0.01
CSRP1-215ENST00000532313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
CSRP1-215ENST00000532313 STK31Q9BXU1 1019 aa15□□□□□ -0.01
CSRP1-215ENST00000532313 OS9Q13438 667 aaPredicted RBP15□□□□□ -0.01
CSRP1-215ENST00000532313 DAPK1P53355 1430 aa15□□□□□ -0.01
CSRP1-215ENST00000532313 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
CSRP1-215ENST00000532313 TIAM1Q13009 1591 aa15□□□□□ -0.01
CSRP1-215ENST00000532313 DHX29Q7Z478 1369 aaKnown RBP14.99□□□□□ -0.01
CSRP1-215ENST00000532313 TNRQ92752 1358 aa14.99□□□□□ -0.01
CSRP1-215ENST00000532313 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
CSRP1-215ENST00000532313 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
CSRP1-215ENST00000532313 MSH5O43196 834 aa14.99□□□□□ -0.01
CSRP1-215ENST00000532313 RAPGEF6Q8TEU7 1601 aa14.98□□□□□ -0.01
CSRP1-215ENST00000532313 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
CSRP1-215ENST00000532313 FAM135AQ9P2D6 1515 aa14.98□□□□□ -0.01
CSRP1-215ENST00000532313 G3V3G9 751 aa14.98□□□□□ -0.01
CSRP1-215ENST00000532313 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
CSRP1-215ENST00000532313 NLRP13Q86W25 1043 aa14.98□□□□□ -0.01
CSRP1-215ENST00000532313 TTC5Q8N0Z6 440 aa14.98□□□□□ -0.01
CSRP1-215ENST00000532313 IPO8O15397 1037 aaKnown RBP14.97□□□□□ -0.01
CSRP1-215ENST00000532313 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
CSRP1-215ENST00000532313 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.02
CSRP1-215ENST00000532313 TEFQ10587 303 aa14.96□□□□□ -0.02
CSRP1-215ENST00000532313 MAP3K1Q13233 1512 aa14.95□□□□□ -0.02
CSRP1-215ENST00000532313 ATP10BO94823 1461 aa14.95□□□□□ -0.02
CSRP1-215ENST00000532313 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
CSRP1-215ENST00000532313 HSP90AA1P07900 732 aaKnown RBP14.95□□□□□ -0.02
CSRP1-215ENST00000532313 NLRP6P59044 892 aa14.95□□□□□ -0.02
CSRP1-215ENST00000532313 CADPS2Q86UW7 1296 aa14.95□□□□□ -0.02
CSRP1-215ENST00000532313 SLC26A8Q96RN1 970 aa14.95□□□□□ -0.02
CSRP1-215ENST00000532313 SMG6Q86US8 1419 aaKnown RBP14.94□□□□□ -0.02
CSRP1-215ENST00000532313 NUTM2BA6NNL0 878 aaPredicted RBP14.93□□□□□ -0.02
CSRP1-215ENST00000532313 NUTM2EB1AL46 878 aaPredicted RBP14.93□□□□□ -0.02
CSRP1-215ENST00000532313 NUTM2AQ8IVF1 878 aaPredicted RBP14.93□□□□□ -0.02
CSRP1-215ENST00000532313 ABTB2Q8N961 1025 aa14.93□□□□□ -0.02
CSRP1-215ENST00000532313 KIAA1107Q9UPP5 1409 aa14.93□□□□□ -0.02
CSRP1-215ENST00000532313 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
CSRP1-215ENST00000532313 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
CSRP1-215ENST00000532313 ST20-MTHFSA0A0A6YYL1 179 aa14.92□□□□□ -0.02
CSRP1-215ENST00000532313 ERBINQ96RT1 1412 aa14.91□□□□□ -0.02
CSRP1-215ENST00000532313 UBAP1LF5GYI3 381 aa14.91□□□□□ -0.02
CSRP1-215ENST00000532313 MSH6P52701 1360 aa14.91□□□□□ -0.02
CSRP1-215ENST00000532313 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
CSRP1-215ENST00000532313 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
CSRP1-215ENST00000532313 PCF11O94913 1555 aaKnown RBP14.89□□□□□ -0.03
CSRP1-215ENST00000532313 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms