RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZMYM4Q5VZL5 1548 aa8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 ZNF692Q9BU19 519 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 ARID4BQ4LE39 1312 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 SUPT6HQ7KZ85 1726 aaKnown RBP8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 TRAPPC8Q9Y2L5 1435 aa8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.97
HMGB1P42-201ENST00000532126 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
HMGB1P42-201ENST00000532126 ARHGEF12Q9NZN5 1544 aa8.96□□□□□ -0.97
HMGB1P42-201ENST00000532126 HNRNPMP52272 730 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMGB1P42-201ENST00000532126 C1QBPQ07021 282 aaKnown RBP8.96□□□□□ -0.98
HMGB1P42-201ENST00000532126 ZNF644Q9H582 1327 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P42-201ENST00000532126 YEATS2Q9ULM3 1422 aa8.96□□□□□ -0.98
HMGB1P42-201ENST00000532126 KIAA1107Q9UPP5 1409 aa8.96□□□□□ -0.98
HMGB1P42-201ENST00000532126 SAMD9LQ8IVG5 1584 aa8.95□□□□□ -0.98
HMGB1P42-201ENST00000532126 ARHGEF40Q8TER5 1519 aa8.95□□□□□ -0.98
HMGB1P42-201ENST00000532126 SYCP2Q9BX26 1530 aa8.95□□□□□ -0.98
HMGB1P42-201ENST00000532126 RGL2O15211 777 aa8.94□□□□□ -0.98
HMGB1P42-201ENST00000532126 SPAG9O60271 1321 aaKnown RBP8.94□□□□□ -0.98
HMGB1P42-201ENST00000532126 MLH3Q9UHC1 1453 aa8.94□□□□□ -0.98
HMGB1P42-201ENST00000532126 KDM5CP41229 1560 aa8.94□□□□□ -0.98
HMGB1P42-201ENST00000532126 ITSN2Q9NZM3 1697 aa8.94□□□□□ -0.98
HMGB1P42-201ENST00000532126 PODXL2Q9NZ53 605 aa8.93□□□□□ -0.98
HMGB1P42-201ENST00000532126 ATP10AO60312 1499 aa8.93□□□□□ -0.98
HMGB1P42-201ENST00000532126 HECW2Q9P2P5 1572 aa8.92□□□□□ -0.98
HMGB1P42-201ENST00000532126 MYOM3Q5VTT5 1437 aa8.92□□□□□ -0.98
HMGB1P42-201ENST00000532126 C9orf84Q5VXU9 1444 aa8.92□□□□□ -0.98
HMGB1P42-201ENST00000532126 RSPH4AQ5TD94 716 aa8.92□□□□□ -0.98
HMGB1P42-201ENST00000532126 MIER1Q8N108 512 aa8.92□□□□□ -0.98
HMGB1P42-201ENST00000532126 CAMSAP2Q08AD1 1489 aa8.91□□□□□ -0.98
HMGB1P42-201ENST00000532126 MBD5Q9P267 1494 aa8.91□□□□□ -0.98
HMGB1P42-201ENST00000532126 MIA2Q96PC5 1412 aa8.91□□□□□ -0.98
HMGB1P42-201ENST00000532126 MLECQ14165 292 aa8.9□□□□□ -0.98
HMGB1P42-201ENST00000532126 SPDYE2BA6NHP3 402 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 SPDYE6P0CI01 402 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 TSPY4P0CV99 314 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 TSPY10P0CW01 314 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 SPDYE2Q495Y8 402 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 DIP2CQ9Y2E4 1556 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 CCDC141Q6ZP82 1450 aa8.89□□□□□ -0.99
HMGB1P42-201ENST00000532126 ATP7AQ04656 1500 aa8.88□□□□□ -0.99
HMGB1P42-201ENST00000532126 ABCA6Q8N139 1617 aa8.87□□□□□ -0.99
HMGB1P42-201ENST00000532126 CIZ1Q9ULV3 898 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P42-201ENST00000532126 SSUH2Q9Y2M2 353 aa8.87□□□□□ -0.99
HMGB1P42-201ENST00000532126 RTEL1-TNFRSF6BF6WH68 1400 aa8.87□□□□□ -0.99
HMGB1P42-201ENST00000532126 FGD6Q6ZV73 1430 aa8.87□□□□□ -0.99
HMGB1P42-201ENST00000532126 REREQ9P2R6 1566 aa8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 INO80Q9ULG1 1556 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 KIDINS220Q9ULH0 1771 aa8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 BCORL1Q5H9F3 1711 aa8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 ARHGEF5Q12774 1597 aa8.86□□□□□ -0.99
HMGB1P42-201ENST00000532126 AGLP35573 1532 aa8.85□□□□□ -0.99
HMGB1P42-201ENST00000532126 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
HMGB1P42-201ENST00000532126 A2MP01023 1474 aa8.85□□□□□ -0.99
HMGB1P42-201ENST00000532126 PTPRMP28827 1452 aa8.85□□□□□ -0.99
HMGB1P42-201ENST00000532126 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
HMGB1P42-201ENST00000532126 SIGLEC1Q9BZZ2 1709 aa8.85□□□□□ -0.99
HMGB1P42-201ENST00000532126 MADDQ8WXG6 1647 aa8.84□□□□□ -0.99
HMGB1P42-201ENST00000532126 FAM50AQ14320 339 aaKnown RBP8.84□□□□□ -0.99
HMGB1P42-201ENST00000532126 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
HMGB1P42-201ENST00000532126 ZBTB47Q9UFB7 747 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P42-201ENST00000532126 PTPN23Q9H3S7 1636 aa8.83□□□□□ -1
HMGB1P42-201ENST00000532126 TCOF1Q13428 1488 aaKnown RBP8.83□□□□□ -1
HMGB1P42-201ENST00000532126 DHX29Q7Z478 1369 aaKnown RBP8.83□□□□□ -1
HMGB1P42-201ENST00000532126 ABCC5O15440 1437 aa8.82□□□□□ -1
HMGB1P42-201ENST00000532126 GGT6Q6P531 493 aa8.82□□□□□ -1
HMGB1P42-201ENST00000532126 PLXNC1O60486 1568 aa8.82□□□□□ -1
HMGB1P42-201ENST00000532126 DAPK1P53355 1430 aa8.81□□□□□ -1
HMGB1P42-201ENST00000532126 KIF3BO15066 747 aa8.81□□□□□ -1
HMGB1P42-201ENST00000532126 RIMS1Q86UR5 1692 aaKnown RBP8.81□□□□□ -1
HMGB1P42-201ENST00000532126 RRP7BPQ9NSQ0 103 aa8.8□□□□□ -1
HMGB1P42-201ENST00000532126 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
HMGB1P42-201ENST00000532126 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
HMGB1P42-201ENST00000532126 MAST1Q9Y2H9 1570 aa8.8□□□□□ -1
HMGB1P42-201ENST00000532126 ADGBQ8N7X0 1667 aa8.8□□□□□ -1
HMGB1P42-201ENST00000532126 CNTLNQ9NXG0 1405 aa8.8□□□□□ -1
HMGB1P42-201ENST00000532126 CEBPAP49715 358 aaPredicted RBP8.79□□□□□ -1
HMGB1P42-201ENST00000532126 DNMT1P26358 1616 aaKnown RBP8.79□□□□□ -1
HMGB1P42-201ENST00000532126 FER1L4A9Z1Z3 1794 aa8.78□□□□□ -1
HMGB1P42-201ENST00000532126 ANKRD30AQ9BXX3 1397 aa8.78□□□□□ -1
HMGB1P42-201ENST00000532126 KIF15Q9NS87 1388 aa8.78□□□□□ -1
HMGB1P42-201ENST00000532126 DSG3P32926 999 aa8.78□□□□□ -1
HMGB1P42-201ENST00000532126 WASHC2CQ9Y4E1 1318 aa8.77□□□□□ -1.01
HMGB1P42-201ENST00000532126 ZMYM3Q14202 1370 aa8.76□□□□□ -1.01
HMGB1P42-201ENST00000532126 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
HMGB1P42-201ENST00000532126 ITGAEP38570 1179 aa8.76□□□□□ -1.01
HMGB1P42-201ENST00000532126 CROCC2H7BZ55 1655 aa8.75□□□□□ -1.01
HMGB1P42-201ENST00000532126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.75□□□□□ -1.01
HMGB1P42-201ENST00000532126 NCOA1Q15788 1441 aa8.75□□□□□ -1.01
HMGB1P42-201ENST00000532126 ERBINQ96RT1 1412 aa8.75□□□□□ -1.01
HMGB1P42-201ENST00000532126 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
HMGB1P42-201ENST00000532126 ADGRL2O95490 1459 aa8.74□□□□□ -1.01
HMGB1P42-201ENST00000532126 PTPRKQ15262 1439 aa8.73□□□□□ -1.01
HMGB1P42-201ENST00000532126 RRBP1Q9P2E9 1410 aaKnown RBP8.73□□□□□ -1.01
HMGB1P42-201ENST00000532126 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
HMGB1P42-201ENST00000532126 KDM5DQ9BY66 1539 aa8.73□□□□□ -1.01
HMGB1P42-201ENST00000532126 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
HMGB1P42-201ENST00000532126 EIF2AK4Q9P2K8 1649 aaKnown RBP8.72□□□□□ -1.01
HMGB1P42-201ENST00000532126 CLTCQ00610 1675 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms