RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 FAM9BQ8IZU0 186 aa23.07■■□□□ 1.28
VPS26B-206ENST00000531741 UHRF1BP1LA0JNW5 1464 aa23.06■■□□□ 1.28
VPS26B-206ENST00000531741 CCDC144AA2RUR9 1427 aa23.05■■□□□ 1.28
VPS26B-206ENST00000531741 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
VPS26B-206ENST00000531741 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
VPS26B-206ENST00000531741 TRPM1Q7Z4N2 1603 aa23.05■■□□□ 1.28
VPS26B-206ENST00000531741 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
VPS26B-206ENST00000531741 E9PCH4 1651 aa23.03■■□□□ 1.28
VPS26B-206ENST00000531741 ATP10AO60312 1499 aa23.03■■□□□ 1.28
VPS26B-206ENST00000531741 PRAG1Q86YV5 1406 aa23.03■■□□□ 1.28
VPS26B-206ENST00000531741 DCAF11Q8TEB1 546 aa23.03■■□□□ 1.28
VPS26B-206ENST00000531741 ERBINQ96RT1 1412 aa23.02■■□□□ 1.28
VPS26B-206ENST00000531741 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
VPS26B-206ENST00000531741 LAMC1P11047 1609 aa23.02■■□□□ 1.28
VPS26B-206ENST00000531741 PLA2R1Q13018 1463 aa23.02■■□□□ 1.28
VPS26B-206ENST00000531741 PLCH2O75038 1416 aa23.02■■□□□ 1.28
VPS26B-206ENST00000531741 ZCCHC11Q5TAX3 1644 aaKnown RBP23.01■■□□□ 1.27
VPS26B-206ENST00000531741 GPRASP1Q5JY77 1395 aa23■■□□□ 1.27
VPS26B-206ENST00000531741 ST20-MTHFSA0A0A6YYL1 179 aa22.98■■□□□ 1.27
VPS26B-206ENST00000531741 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
VPS26B-206ENST00000531741 ABCC1P33527 1531 aa22.97■■□□□ 1.27
VPS26B-206ENST00000531741 ARAP3Q8WWN8 1544 aa22.96■■□□□ 1.27
VPS26B-206ENST00000531741 EIF2AK4Q9P2K8 1649 aaKnown RBP22.95■■□□□ 1.27
VPS26B-206ENST00000531741 A2MP01023 1474 aa22.95■■□□□ 1.26
VPS26B-206ENST00000531741 SMG6Q86US8 1419 aaKnown RBP22.94■■□□□ 1.26
VPS26B-206ENST00000531741 POLR3GLQ9BT43 218 aa22.93■■□□□ 1.26
VPS26B-206ENST00000531741 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
VPS26B-206ENST00000531741 PPP4R2Q9NY27 417 aa22.93■■□□□ 1.26
VPS26B-206ENST00000531741 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
VPS26B-206ENST00000531741 RALBP1Q15311 655 aa22.91■■□□□ 1.26
VPS26B-206ENST00000531741 PNISRQ8TF01 805 aaKnown RBP22.9■■□□□ 1.26
VPS26B-206ENST00000531741 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
VPS26B-206ENST00000531741 RBM19Q9Y4C8 960 aaKnown RBP22.89■■□□□ 1.25
VPS26B-206ENST00000531741 RTEL1-TNFRSF6BF6WH68 1400 aa22.88■■□□□ 1.25
VPS26B-206ENST00000531741 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
VPS26B-206ENST00000531741 IRX6P78412 446 aaPredicted RBP22.88■■□□□ 1.25
VPS26B-206ENST00000531741 MYBBP1AQ9BQG0 1328 aaKnown RBP22.87■■□□□ 1.25
VPS26B-206ENST00000531741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.86■■□□□ 1.25
VPS26B-206ENST00000531741 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
VPS26B-206ENST00000531741 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
VPS26B-206ENST00000531741 TRAPPC8Q9Y2L5 1435 aa22.84■■□□□ 1.25
VPS26B-206ENST00000531741 RNF17Q9BXT8 1623 aaKnown RBP22.84■■□□□ 1.25
VPS26B-206ENST00000531741 NUDCQ9Y266 331 aa22.83■■□□□ 1.25
VPS26B-206ENST00000531741 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
VPS26B-206ENST00000531741 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
VPS26B-206ENST00000531741 ZFYVE16Q7Z3T8 1539 aa22.81■■□□□ 1.24
VPS26B-206ENST00000531741 PARD3Q8TEW0 1356 aa22.81■■□□□ 1.24
VPS26B-206ENST00000531741 WASHC2CQ9Y4E1 1318 aa22.81■■□□□ 1.24
VPS26B-206ENST00000531741 NBPF1Q3BBV0 1214 aa22.81■■□□□ 1.24
VPS26B-206ENST00000531741 DEPDC5O75140 1603 aa22.8■■□□□ 1.24
VPS26B-206ENST00000531741 TESK2Q96S53 571 aa22.78■■□□□ 1.24
VPS26B-206ENST00000531741 TRPM2O94759 1503 aa22.78■■□□□ 1.24
VPS26B-206ENST00000531741 PER1O15534 1290 aaPredicted RBP22.77■■□□□ 1.23
VPS26B-206ENST00000531741 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
VPS26B-206ENST00000531741 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
VPS26B-206ENST00000531741 ABCA9Q8IUA7 1624 aa22.76■■□□□ 1.23
VPS26B-206ENST00000531741 PTPRTO14522 1441 aa22.75■■□□□ 1.23
VPS26B-206ENST00000531741 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
VPS26B-206ENST00000531741 NLRP13Q86W25 1043 aa22.75■■□□□ 1.23
VPS26B-206ENST00000531741 CEP152O94986 1710 aa22.74■■□□□ 1.23
VPS26B-206ENST00000531741 INSRP06213 1382 aa22.74■■□□□ 1.23
VPS26B-206ENST00000531741 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
VPS26B-206ENST00000531741 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
VPS26B-206ENST00000531741 CNGB1Q14028 1251 aaPredicted RBP22.73■■□□□ 1.23
VPS26B-206ENST00000531741 ZMYM4Q5VZL5 1548 aa22.73■■□□□ 1.23
VPS26B-206ENST00000531741 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
VPS26B-206ENST00000531741 ANP32EQ9BTT0 268 aa22.73■■□□□ 1.23
VPS26B-206ENST00000531741 TET3O43151 1660 aa22.73■■□□□ 1.23
VPS26B-206ENST00000531741 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
VPS26B-206ENST00000531741 VWDEQ8N2E2 1590 aa22.72■■□□□ 1.23
VPS26B-206ENST00000531741 NEURL4Q96JN8 1562 aa22.72■■□□□ 1.23
VPS26B-206ENST00000531741 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
VPS26B-206ENST00000531741 ATP7AQ04656 1500 aa22.7■■□□□ 1.22
VPS26B-206ENST00000531741 TMF1P82094 1093 aa22.69■■□□□ 1.22
VPS26B-206ENST00000531741 FANCIQ9NVI1 1328 aa22.68■■□□□ 1.22
VPS26B-206ENST00000531741 FANCAO15360 1455 aa22.67■■□□□ 1.22
VPS26B-206ENST00000531741 SCAPERQ9BY12 1400 aa22.67■■□□□ 1.22
VPS26B-206ENST00000531741 AFAP1Q8N556 730 aa22.67■■□□□ 1.22
VPS26B-206ENST00000531741 CLTCL1P53675 1640 aa22.66■■□□□ 1.22
VPS26B-206ENST00000531741 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
VPS26B-206ENST00000531741 KIAA1210Q9ULL0 1709 aa22.64■■□□□ 1.21
VPS26B-206ENST00000531741 KANK1Q14678 1352 aa22.63■■□□□ 1.21
VPS26B-206ENST00000531741 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
VPS26B-206ENST00000531741 PANK3Q9H999 370 aa22.61■■□□□ 1.21
VPS26B-206ENST00000531741 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
VPS26B-206ENST00000531741 BLMP54132 1417 aaPredicted RBP22.6■■□□□ 1.21
VPS26B-206ENST00000531741 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
VPS26B-206ENST00000531741 MROH1Q8NDA8 1641 aa22.59■■□□□ 1.21
VPS26B-206ENST00000531741 SYNMO15061 1565 aa22.58■■□□□ 1.2
VPS26B-206ENST00000531741 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
VPS26B-206ENST00000531741 MYOM2P54296 1465 aa22.54■■□□□ 1.2
VPS26B-206ENST00000531741 ASXL2Q76L83 1435 aa22.54■■□□□ 1.2
VPS26B-206ENST00000531741 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
VPS26B-206ENST00000531741 EIF3AQ14152 1382 aaKnown RBP22.52■■□□□ 1.2
VPS26B-206ENST00000531741 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
VPS26B-206ENST00000531741 LMTK2Q8IWU2 1503 aa22.52■■□□□ 1.2
VPS26B-206ENST00000531741 KIDINS220Q9ULH0 1771 aa22.51■■□□□ 1.19
VPS26B-206ENST00000531741 MAP3K4Q9Y6R4 1608 aa22.51■■□□□ 1.19
VPS26B-206ENST00000531741 KIF3BO15066 747 aa22.5■■□□□ 1.19
VPS26B-206ENST00000531741 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms