RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	LOC105371045	A0A1W2PR82	267 aa		33.57	■■■□□ 2.96
FDFT1-220	ENST00000531733	ILDR2	Q71H61	639 aa		33.56	■■■□□ 2.96
FDFT1-220	ENST00000531733	KDM5D	Q9BY66	1539 aa		33.56	■■■□□ 2.96
FDFT1-220	ENST00000531733	ARHGEF5	Q12774	1597 aa		33.55	■■■□□ 2.96
FDFT1-220	ENST00000531733	PZP	P20742	1482 aa		33.53	■■■□□ 2.96
FDFT1-220	ENST00000531733	LRRC9	Q6ZRR7	1453 aa		33.53	■■■□□ 2.96
FDFT1-220	ENST00000531733	TNR	Q92752	1358 aa		33.53	■■■□□ 2.96
FDFT1-220	ENST00000531733	RSPH4A	Q5TD94	716 aa		33.53	■■■□□ 2.96
FDFT1-220	ENST00000531733	VPS8	Q8N3P4	1428 aa		33.53	■■■□□ 2.96
FDFT1-220	ENST00000531733	WASHC2C	Q9Y4E1	1318 aa		33.5	■■■□□ 2.95
FDFT1-220	ENST00000531733	NEURL4	Q96JN8	1562 aa		33.47	■■■□□ 2.95
FDFT1-220	ENST00000531733	KANK4	Q5T7N3	995 aa	Predicted RBP	33.47	■■■□□ 2.95
FDFT1-220	ENST00000531733	FAM135A	Q9P2D6	1515 aa		33.47	■■■□□ 2.95
FDFT1-220	ENST00000531733	SPATA31D1	Q6ZQQ2	1576 aa		33.44	■■■□□ 2.94
FDFT1-220	ENST00000531733	UBAP1L	F5GYI3	381 aa		33.44	■■■□□ 2.94
FDFT1-220	ENST00000531733	TSPY4	P0CV99	314 aa		33.44	■■■□□ 2.94
FDFT1-220	ENST00000531733	TSPY10	P0CW01	314 aa		33.44	■■■□□ 2.94
FDFT1-220	ENST00000531733	POLR1A	O95602	1720 aa	Predicted RBP	33.44	■■■□□ 2.94
FDFT1-220	ENST00000531733	MIA2	Q96PC5	1412 aa		33.41	■■■□□ 2.94
FDFT1-220	ENST00000531733	MAST1	Q9Y2H9	1570 aa		33.4	■■■□□ 2.94
FDFT1-220	ENST00000531733	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.39	■■■□□ 2.94
FDFT1-220	ENST00000531733	RNF17	Q9BXT8	1623 aa	Known RBP	33.39	■■■□□ 2.93
FDFT1-220	ENST00000531733	ABCC3	O15438	1527 aa		33.35	■■■□□ 2.93
FDFT1-220	ENST00000531733	NLRP1	Q9C000	1473 aa		33.34	■■■□□ 2.93
FDFT1-220	ENST00000531733	MAP3K1	Q13233	1512 aa		33.33	■■■□□ 2.93
FDFT1-220	ENST00000531733	MYOM3	Q5VTT5	1437 aa		33.33	■■■□□ 2.93
FDFT1-220	ENST00000531733	UGGT1	Q9NYU2	1555 aa		33.33	■■■□□ 2.93
FDFT1-220	ENST00000531733	MROH1	Q8NDA8	1641 aa		33.32	■■■□□ 2.92
FDFT1-220	ENST00000531733	SHANK2	Q9UPX8	1470 aa		33.3	■■■□□ 2.92
FDFT1-220	ENST00000531733	ANKLE2	Q86XL3	938 aa		33.29	■■■□□ 2.92
FDFT1-220	ENST00000531733	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.28	■■■□□ 2.92
FDFT1-220	ENST00000531733	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.28	■■■□□ 2.92
FDFT1-220	ENST00000531733	VWDE	Q8N2E2	1590 aa		33.28	■■■□□ 2.92
FDFT1-220	ENST00000531733	ZC3H13	Q5T200	1668 aa	Known RBP	33.27	■■■□□ 2.92
FDFT1-220	ENST00000531733	CPS1	P31327	1500 aa		33.25	■■■□□ 2.91
FDFT1-220	ENST00000531733	SOCS7	O14512	581 aa		33.25	■■■□□ 2.91
FDFT1-220	ENST00000531733	CEP152	O94986	1710 aa		33.25	■■■□□ 2.91
FDFT1-220	ENST00000531733	NPHP4	O75161	1426 aa	Predicted RBP	33.24	■■■□□ 2.91
FDFT1-220	ENST00000531733	MED14	O60244	1454 aa		33.24	■■■□□ 2.91
FDFT1-220	ENST00000531733	ERVK-7	P63135	1459 aa		33.24	■■■□□ 2.91
FDFT1-220	ENST00000531733	DEPDC5	O75140	1603 aa		33.24	■■■□□ 2.91
FDFT1-220	ENST00000531733	DUOX2	Q9NRD8	1548 aa		33.19	■■■□□ 2.9
FDFT1-220	ENST00000531733	CFAP65	Q6ZU64	1925 aa	Known RBP	33.19	■■■□□ 2.9
FDFT1-220	ENST00000531733	PIP4K2B	P78356	416 aa		33.18	■■■□□ 2.9
FDFT1-220	ENST00000531733	IQGAP1	P46940	1657 aa		33.17	■■■□□ 2.9
FDFT1-220	ENST00000531733	SCAF1	Q9H7N4	1312 aa	Known RBP	33.16	■■■□□ 2.9
FDFT1-220	ENST00000531733	ABCC5	O15440	1437 aa		33.16	■■■□□ 2.9
FDFT1-220	ENST00000531733	CROCC2	H7BZ55	1655 aa		33.15	■■■□□ 2.9
FDFT1-220	ENST00000531733	HSPA1L	P34931	641 aa		33.15	■■■□□ 2.9
FDFT1-220	ENST00000531733	STRCP1	A6NGW2	1772 aa		33.14	■■■□□ 2.9
FDFT1-220	ENST00000531733	ALK	Q9UM73	1620 aa		33.14	■■■□□ 2.9
FDFT1-220	ENST00000531733	KIF15	Q9NS87	1388 aa		33.14	■■■□□ 2.9
FDFT1-220	ENST00000531733	PTPN23	Q9H3S7	1636 aa		33.13	■■■□□ 2.89
FDFT1-220	ENST00000531733	UBR1	Q8IWV7	1749 aa		33.12	■■■□□ 2.89
FDFT1-220	ENST00000531733	TOM1	O60784	492 aa		33.11	■■■□□ 2.89
FDFT1-220	ENST00000531733	RRP7BP	Q9NSQ0	103 aa		33.11	■■■□□ 2.89
FDFT1-220	ENST00000531733	PRDM15	P57071	1507 aa	Predicted RBP	33.1	■■■□□ 2.89
FDFT1-220	ENST00000531733	DAPK1	P53355	1430 aa		33.06	■■■□□ 2.88
FDFT1-220	ENST00000531733	ERBIN	Q96RT1	1412 aa		33.06	■■■□□ 2.88
FDFT1-220	ENST00000531733	ARHGAP31	Q2M1Z3	1444 aa		33.03	■■■□□ 2.88
FDFT1-220	ENST00000531733	LRRC7	Q96NW7	1537 aa		33.03	■■■□□ 2.88
FDFT1-220	ENST00000531733	LTK	P29376	864 aa		33.02	■■■□□ 2.88
FDFT1-220	ENST00000531733	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.02	■■■□□ 2.88	1e-7	■□□□□ 8.2
FDFT1-220	ENST00000531733	FGD6	Q6ZV73	1430 aa		33.02	■■■□□ 2.88
FDFT1-220	ENST00000531733	SCAF11	Q99590	1463 aa	Known RBP	33	■■■□□ 2.87
FDFT1-220	ENST00000531733	ARHGAP23	Q9P227	1491 aa		33	■■■□□ 2.87
FDFT1-220	ENST00000531733	MED1	Q15648	1581 aa	Predicted RBP	32.99	■■■□□ 2.87
FDFT1-220	ENST00000531733	SLIT1	O75093	1534 aa		32.97	■■■□□ 2.87
FDFT1-220	ENST00000531733	APLP2	Q06481	763 aa		32.97	■■■□□ 2.87
FDFT1-220	ENST00000531733	CHIC2	Q9UKJ5	165 aa		32.97	■■■□□ 2.87
FDFT1-220	ENST00000531733	PIK3C2B	O00750	1634 aa		32.95	■■■□□ 2.87
FDFT1-220	ENST00000531733	SYNM	O15061	1565 aa		32.95	■■■□□ 2.86
FDFT1-220	ENST00000531733	TXNDC2	Q86VQ3	553 aa		32.94	■■■□□ 2.86
FDFT1-220	ENST00000531733	SENP3	Q9H4L4	574 aa	Predicted RBP	32.9	■■■□□ 2.86
FDFT1-220	ENST00000531733	LMTK2	Q8IWU2	1503 aa		32.88	■■■□□ 2.85
FDFT1-220	ENST00000531733	ANKRD30A	Q9BXX3	1397 aa		32.88	■■■□□ 2.85
FDFT1-220	ENST00000531733	KANK1	Q14678	1352 aa		32.87	■■■□□ 2.85
FDFT1-220	ENST00000531733	TMEM2	Q9UHN6	1383 aa		32.86	■■■□□ 2.85
FDFT1-220	ENST00000531733	XIRP1	Q702N8	1843 aa	Known RBP	32.86	■■■□□ 2.85
FDFT1-220	ENST00000531733	IDI1	Q13907	227 aa		32.84	■■■□□ 2.85
FDFT1-220	ENST00000531733	EID1	Q9Y6B2	187 aa		32.82	■■■□□ 2.84
FDFT1-220	ENST00000531733	EFCAB6	Q5THR3	1501 aa		32.8	■■■□□ 2.84
FDFT1-220	ENST00000531733	STAG3	Q9UJ98	1225 aa		32.79	■■■□□ 2.84
FDFT1-220	ENST00000531733	ADGRL2	O95490	1459 aa		32.79	■■■□□ 2.84
FDFT1-220	ENST00000531733	KDM5A	P29375	1690 aa	Known RBP	32.78	■■■□□ 2.84
FDFT1-220	ENST00000531733	NOS1	P29475	1434 aa		32.77	■■■□□ 2.84
FDFT1-220	ENST00000531733	TET3	O43151	1660 aa		32.73	■■■□□ 2.83
FDFT1-220	ENST00000531733	FAM50A	Q14320	339 aa	Known RBP	32.73	■■■□□ 2.83
FDFT1-220	ENST00000531733	ADGRB3	O60242	1522 aa		32.72	■■■□□ 2.83
FDFT1-220	ENST00000531733	SLC26A8	Q96RN1	970 aa		32.7	■■■□□ 2.83
FDFT1-220	ENST00000531733	ANKRD50	Q9ULJ7	1429 aa		32.68	■■■□□ 2.82
FDFT1-220	ENST00000531733	RBM33	Q96EV2	1170 aa	Known RBP	32.67	■■■□□ 2.82
FDFT1-220	ENST00000531733	PHF23	Q9BUL5	403 aa	Predicted RBP	32.67	■■■□□ 2.82
FDFT1-220	ENST00000531733	TMEM94	Q12767	1356 aa		32.67	■■■□□ 2.82
FDFT1-220	ENST00000531733	KCNA6	P17658	529 aa		32.64	■■■□□ 2.82
FDFT1-220	ENST00000531733	SLC52A1	Q9NWF4	448 aa		32.62	■■■□□ 2.81
FDFT1-220	ENST00000531733	MYO5B	Q9ULV0	1848 aa		32.61	■■■□□ 2.81
FDFT1-220	ENST00000531733	RPRD2	Q5VT52	1461 aa	Known RBP	32.6	■■■□□ 2.81
FDFT1-220	ENST00000531733	FAM135B	Q49AJ0	1406 aa		32.58	■■■□□ 2.81
FDFT1-220	ENST00000531733	NWD1	Q149M9	1564 aa		32.58	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms