RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 KIF3BO15066 747 aa30.49■■■□□ 2.47
UBXN1-212ENST00000531625 NCOA2Q15596 1464 aa30.49■■■□□ 2.47
UBXN1-212ENST00000531625 DNMT1P26358 1616 aaKnown RBP30.48■■■□□ 2.47
UBXN1-212ENST00000531625 CAMSAP2Q08AD1 1489 aa30.47■■■□□ 2.47
UBXN1-212ENST00000531625 UBAP1LF5GYI3 381 aa30.47■■■□□ 2.47
UBXN1-212ENST00000531625 TNRQ92752 1358 aa30.45■■■□□ 2.47
UBXN1-212ENST00000531625 PZPP20742 1482 aa30.44■■■□□ 2.46
UBXN1-212ENST00000531625 KDM5DQ9BY66 1539 aa30.44■■■□□ 2.46
UBXN1-212ENST00000531625 FBXO31Q5XUX0 539 aaPredicted RBP30.44■■■□□ 2.46
UBXN1-212ENST00000531625 WASHC2CQ9Y4E1 1318 aa30.41■■■□□ 2.46
UBXN1-212ENST00000531625 ARHGEF5Q12774 1597 aa30.39■■■□□ 2.46
UBXN1-212ENST00000531625 TSPY4P0CV99 314 aa30.37■■■□□ 2.45
UBXN1-212ENST00000531625 TSPY10P0CW01 314 aa30.37■■■□□ 2.45
UBXN1-212ENST00000531625 MIA2Q96PC5 1412 aa30.35■■■□□ 2.45
UBXN1-212ENST00000531625 NEURL4Q96JN8 1562 aa30.35■■■□□ 2.45
UBXN1-212ENST00000531625 POLR1AO95602 1720 aaPredicted RBP30.35■■■□□ 2.45
UBXN1-212ENST00000531625 NLRP1Q9C000 1473 aa30.32■■■□□ 2.44
UBXN1-212ENST00000531625 ANKLE2Q86XL3 938 aa30.32■■■□□ 2.44
UBXN1-212ENST00000531625 THEMISQ8N1K5 641 aaPredicted RBP30.32■■■□□ 2.44
UBXN1-212ENST00000531625 CPS1P31327 1500 aa30.32■■■□□ 2.44
UBXN1-212ENST00000531625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.29■■■□□ 2.44
UBXN1-212ENST00000531625 SHANK2Q9UPX8 1470 aa30.29■■■□□ 2.44
UBXN1-212ENST00000531625 LRRC9Q6ZRR7 1453 aa30.28■■■□□ 2.44
UBXN1-212ENST00000531625 UGGT1Q9NYU2 1555 aa30.26■■■□□ 2.43
UBXN1-212ENST00000531625 VPS8Q8N3P4 1428 aa30.25■■■□□ 2.43
UBXN1-212ENST00000531625 RNF17Q9BXT8 1623 aaKnown RBP30.25■■■□□ 2.43
UBXN1-212ENST00000531625 MED14O60244 1454 aa30.25■■■□□ 2.43
UBXN1-212ENST00000531625 MAST1Q9Y2H9 1570 aa30.24■■■□□ 2.43
UBXN1-212ENST00000531625 TOM1O60784 492 aa30.23■■■□□ 2.43
UBXN1-212ENST00000531625 DEPDC5O75140 1603 aa30.22■■■□□ 2.43
UBXN1-212ENST00000531625 ABCC3O15438 1527 aa30.21■■■□□ 2.43
UBXN1-212ENST00000531625 NPHP4O75161 1426 aaPredicted RBP30.21■■■□□ 2.43
UBXN1-212ENST00000531625 VWDEQ8N2E2 1590 aa30.2■■■□□ 2.43
UBXN1-212ENST00000531625 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
UBXN1-212ENST00000531625 EIF2AK4Q9P2K8 1649 aaKnown RBP30.18■■■□□ 2.42
UBXN1-212ENST00000531625 MAP3K1Q13233 1512 aa30.17■■■□□ 2.42
UBXN1-212ENST00000531625 HSPA1LP34931 641 aa30.17■■■□□ 2.42
UBXN1-212ENST00000531625 PIP4K2BP78356 416 aa30.16■■■□□ 2.42
UBXN1-212ENST00000531625 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
UBXN1-212ENST00000531625 KANK4Q5T7N3 995 aaPredicted RBP30.14■■■□□ 2.42
UBXN1-212ENST00000531625 MYOM3Q5VTT5 1437 aa30.13■■■□□ 2.41
UBXN1-212ENST00000531625 ERVK-7P63135 1459 aa30.13■■■□□ 2.41
UBXN1-212ENST00000531625 MROH1Q8NDA8 1641 aa30.11■■■□□ 2.41
UBXN1-212ENST00000531625 IQGAP1P46940 1657 aa30.11■■■□□ 2.41
UBXN1-212ENST00000531625 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
UBXN1-212ENST00000531625 DUOX2Q9NRD8 1548 aa30.08■■■□□ 2.41
UBXN1-212ENST00000531625 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
UBXN1-212ENST00000531625 MED1Q15648 1581 aaPredicted RBP30.03■■■□□ 2.4
UBXN1-212ENST00000531625 CEP152O94986 1710 aa30.02■■■□□ 2.4
UBXN1-212ENST00000531625 ARHGAP31Q2M1Z3 1444 aa30.02■■■□□ 2.4
UBXN1-212ENST00000531625 LRRC7Q96NW7 1537 aa30.01■■■□□ 2.4
UBXN1-212ENST00000531625 CFAP65Q6ZU64 1925 aaKnown RBP30.01■■■□□ 2.39
UBXN1-212ENST00000531625 UBR1Q8IWV7 1749 aa30■■■□□ 2.39
UBXN1-212ENST00000531625 KIF15Q9NS87 1388 aa30■■■□□ 2.39
UBXN1-212ENST00000531625 STRCP1A6NGW2 1772 aa30■■■□□ 2.39
UBXN1-212ENST00000531625 ERBINQ96RT1 1412 aa29.98■■■□□ 2.39
UBXN1-212ENST00000531625 PRDM15P57071 1507 aaPredicted RBP29.98■■■□□ 2.39
UBXN1-212ENST00000531625 SCAF11Q99590 1463 aaKnown RBP29.98■■■□□ 2.39
UBXN1-212ENST00000531625 ARHGAP23Q9P227 1491 aa29.97■■■□□ 2.39
UBXN1-212ENST00000531625 SYNMO15061 1565 aa29.97■■■□□ 2.39
UBXN1-212ENST00000531625 ABCC5O15440 1437 aa29.96■■■□□ 2.39
UBXN1-212ENST00000531625 SLIT1O75093 1534 aa29.96■■■□□ 2.39
UBXN1-212ENST00000531625 LTKP29376 864 aa29.94■■■□□ 2.38
UBXN1-212ENST00000531625 RRP7BPQ9NSQ0 103 aa29.93■■■□□ 2.38
UBXN1-212ENST00000531625 TXNDC2Q86VQ3 553 aa29.92■■■□□ 2.38
UBXN1-212ENST00000531625 CROCC2H7BZ55 1655 aa29.91■■■□□ 2.38
UBXN1-212ENST00000531625 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.38
UBXN1-212ENST00000531625 EID1Q9Y6B2 187 aa29.88■■■□□ 2.37
UBXN1-212ENST00000531625 DAPK1P53355 1430 aa29.88■■■□□ 2.37
UBXN1-212ENST00000531625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.86■■■□□ 2.37
UBXN1-212ENST00000531625 KANK1Q14678 1352 aa29.86■■■□□ 2.37
UBXN1-212ENST00000531625 APLP2Q06481 763 aa29.85■■■□□ 2.37
UBXN1-212ENST00000531625 TMEM2Q9UHN6 1383 aa29.84■■■□□ 2.37
UBXN1-212ENST00000531625 FGD6Q6ZV73 1430 aa29.83■■■□□ 2.37
UBXN1-212ENST00000531625 PHF23Q9BUL5 403 aaPredicted RBP29.83■■■□□ 2.37
UBXN1-212ENST00000531625 PIK3C2BO00750 1634 aa29.82■■■□□ 2.36
UBXN1-212ENST00000531625 LMTK2Q8IWU2 1503 aa29.81■■■□□ 2.36
UBXN1-212ENST00000531625 ANKRD30AQ9BXX3 1397 aa29.8■■■□□ 2.36
UBXN1-212ENST00000531625 KDM5AP29375 1690 aaKnown RBP29.79■■■□□ 2.36
UBXN1-212ENST00000531625 STAG3Q9UJ98 1225 aa29.78■■■□□ 2.36
UBXN1-212ENST00000531625 IDI1Q13907 227 aa29.77■■■□□ 2.36
UBXN1-212ENST00000531625 EFCAB6Q5THR3 1501 aa29.76■■■□□ 2.35
UBXN1-212ENST00000531625 XIRP1Q702N8 1843 aaKnown RBP29.75■■■□□ 2.35
UBXN1-212ENST00000531625 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
UBXN1-212ENST00000531625 CHIC2Q9UKJ5 165 aa29.75■■■□□ 2.35
UBXN1-212ENST00000531625 NOS1P29475 1434 aa29.72■■■□□ 2.35
UBXN1-212ENST00000531625 KCNA6P17658 529 aa29.7■■■□□ 2.35
UBXN1-212ENST00000531625 FAM135BQ49AJ0 1406 aa29.7■■■□□ 2.34
UBXN1-212ENST00000531625 SLC52A1Q9NWF4 448 aa29.68■■■□□ 2.34
UBXN1-212ENST00000531625 TET3O43151 1660 aa29.68■■■□□ 2.34
UBXN1-212ENST00000531625 ADGRL2O95490 1459 aa29.68■■■□□ 2.34
UBXN1-212ENST00000531625 TMEM94Q12767 1356 aa29.67■■■□□ 2.34
UBXN1-212ENST00000531625 SLC26A8Q96RN1 970 aa29.64■■■□□ 2.34
UBXN1-212ENST00000531625 ADGRB3O60242 1522 aa29.64■■■□□ 2.34
UBXN1-212ENST00000531625 PROSER2Q86WR7 435 aaPredicted RBP29.61■■■□□ 2.33
UBXN1-212ENST00000531625 RPRD2Q5VT52 1461 aaKnown RBP29.61■■■□□ 2.33
UBXN1-212ENST00000531625 RGS17Q9UGC6 210 aaPredicted RBP29.6■■■□□ 2.33
UBXN1-212ENST00000531625 NKTRP30414 1462 aaKnown RBP29.58■■■□□ 2.33
UBXN1-212ENST00000531625 ANKRD50Q9ULJ7 1429 aa29.57■■■□□ 2.32
UBXN1-212ENST00000531625 NWD1Q149M9 1564 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms