RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 PDE4AP27815 886 aa5.69□□□□□ -1.5
RC3H1-206ENST00000531594 MAP3K9P80192 1104 aa5.69□□□□□ -1.5
RC3H1-206ENST00000531594 DDX27Q96GQ7 796 aaKnown RBP5.69□□□□□ -1.5
RC3H1-206ENST00000531594 ZFRQ96KR1 1074 aaKnown RBP5.69□□□□□ -1.5
RC3H1-206ENST00000531594 KIAA1468Q9P260 1216 aa5.69□□□□□ -1.5
RC3H1-206ENST00000531594 GTPBP6O43824 516 aaPredicted RBP5.68□□□□□ -1.5
RC3H1-206ENST00000531594 MFSD10Q14728 455 aa5.68□□□□□ -1.5
RC3H1-206ENST00000531594 CADPS2Q86UW7 1296 aa5.68□□□□□ -1.5
RC3H1-206ENST00000531594 KCNC4Q03721 635 aa5.65□□□□□ -1.5
RC3H1-206ENST00000531594 TYW1BQ6NUM6 668 aa5.65□□□□□ -1.5
RC3H1-206ENST00000531594 PHF14O94880 888 aa5.64□□□□□ -1.51
RC3H1-206ENST00000531594 C6orf132Q5T0Z8 1188 aa5.64□□□□□ -1.51
RC3H1-206ENST00000531594 LAPTM4BQ86VI4 370 aa5.64□□□□□ -1.51
RC3H1-206ENST00000531594 HPS5Q9UPZ3 1129 aa5.64□□□□□ -1.51
RC3H1-206ENST00000531594 RBM33Q96EV2 1170 aaKnown RBP5.63□□□□□ -1.51
RC3H1-206ENST00000531594 TRIM6-TRIM34B2RNG4 842 aa5.62□□□□□ -1.51
RC3H1-206ENST00000531594 C3orf80F5H4A9 247 aa5.62□□□□□ -1.51
RC3H1-206ENST00000531594 DPYSL4O14531 572 aa5.62□□□□□ -1.51
RC3H1-206ENST00000531594 GFRA3O60609 400 aa5.62□□□□□ -1.51
RC3H1-206ENST00000531594 FBXW7Q969H0 707 aa5.62□□□□□ -1.51
RC3H1-206ENST00000531594 FAM98CQ17RN3 349 aaKnown RBP5.61□□□□□ -1.51
RC3H1-206ENST00000531594 TSR1Q2NL82 804 aaKnown RBP5.61□□□□□ -1.51
RC3H1-206ENST00000531594 DDX12PQ92771 950 aa5.61□□□□□ -1.51
RC3H1-206ENST00000531594 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.61□□□□□ -1.51
RC3H1-206ENST00000531594 TSKSQ9UJT2 592 aa5.61□□□□□ -1.51
RC3H1-206ENST00000531594 SMAPO00193 183 aa5.6□□□□□ -1.51
RC3H1-206ENST00000531594 TRAF7Q6Q0C0 670 aa5.6□□□□□ -1.51
RC3H1-206ENST00000531594 NYAP1Q6ZVC0 841 aa5.6□□□□□ -1.51
RC3H1-206ENST00000531594 RYDENQ9NUL5 291 aaKnown RBP5.6□□□□□ -1.51
RC3H1-206ENST00000531594 TSR3Q9UJK0 312 aaKnown RBP5.6□□□□□ -1.51
RC3H1-206ENST00000531594 TJAP1Q5JTD0 557 aa5.59□□□□□ -1.51
RC3H1-206ENST00000531594 LRCH3Q96II8 777 aa5.59□□□□□ -1.51
RC3H1-206ENST00000531594 PRKD2Q9BZL6 878 aa5.59□□□□□ -1.51
RC3H1-206ENST00000531594 FAM198AQ9UFP1 575 aa5.59□□□□□ -1.51
RC3H1-206ENST00000531594 ONECUT3O60422 494 aaPredicted RBP5.58□□□□□ -1.52
RC3H1-206ENST00000531594 PRIM1P49642 420 aaKnown RBP5.58□□□□□ -1.52
RC3H1-206ENST00000531594 CAMK2BQ13554 666 aa5.57□□□□□ -1.52
RC3H1-206ENST00000531594 ZNF516Q92618 1163 aa5.57□□□□□ -1.52
RC3H1-206ENST00000531594 PPP1R18Q6NYC8 613 aa5.56□□□□□ -1.52
RC3H1-206ENST00000531594 SAMD7Q7Z3H4 446 aa5.56□□□□□ -1.52
RC3H1-206ENST00000531594 MTRQ99707 1265 aa5.56□□□□□ -1.52
RC3H1-206ENST00000531594 EPAS1Q99814 870 aa5.56□□□□□ -1.52
RC3H1-206ENST00000531594 NBR1Q14596 966 aa5.55□□□□□ -1.52
RC3H1-206ENST00000531594 NKX2-3Q8TAU0 364 aa5.55□□□□□ -1.52
RC3H1-206ENST00000531594 PPP4CP60510 307 aa5.54□□□□□ -1.52
RC3H1-206ENST00000531594 EN1Q05925 392 aaPredicted RBP5.54□□□□□ -1.52
RC3H1-206ENST00000531594 LAPTM4AQ15012 233 aa5.54□□□□□ -1.52
RC3H1-206ENST00000531594 NRG2O14511 850 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-206ENST00000531594 MAP3K7O43318 606 aa5.53□□□□□ -1.52
RC3H1-206ENST00000531594 APLP1P51693 650 aa5.52□□□□□ -1.53
RC3H1-206ENST00000531594 CDCA7LQ96GN5 454 aa5.52□□□□□ -1.53
RC3H1-206ENST00000531594 PACS2Q86VP3 889 aa5.51□□□□□ -1.53
RC3H1-206ENST00000531594 ZNF775Q96BV0 537 aaPredicted RBP5.51□□□□□ -1.53
RC3H1-206ENST00000531594 CDHR5Q9HBB8 845 aa5.51□□□□□ -1.53
RC3H1-206ENST00000531594 IL21Q9HBE4 155 aa5.51□□□□□ -1.53
RC3H1-206ENST00000531594 ZNF787Q6DD87 383 aa5.5□□□□□ -1.53
RC3H1-206ENST00000531594 RNF40O75150 1001 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 PRSS12P56730 875 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 PDIA6Q15084 440 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 TRIM67Q6ZTA4 783 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 TATDN2Q93075 761 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 EMID1Q96A84 441 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-206ENST00000531594 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.49□□□□□ -1.53
RC3H1-206ENST00000531594 PNMA3Q9UL41 463 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 PDZRN3Q9UPQ7 1066 aa5.49□□□□□ -1.53
RC3H1-206ENST00000531594 V9GY48 417 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-206ENST00000531594 DCAF8L2P0C7V8 631 aa5.48□□□□□ -1.53
RC3H1-206ENST00000531594 COPS2P61201 443 aa5.48□□□□□ -1.53
RC3H1-206ENST00000531594 POTECB2RU33 542 aa5.47□□□□□ -1.53
RC3H1-206ENST00000531594 NUDT18Q6ZVK8 323 aa5.47□□□□□ -1.53
RC3H1-206ENST00000531594 GRXCR2A6NFK2 248 aa5.45□□□□□ -1.54
RC3H1-206ENST00000531594 NBPF26B4DH59 902 aa5.44□□□□□ -1.54
RC3H1-206ENST00000531594 SWT1Q5T5J6 900 aaKnown RBP5.44□□□□□ -1.54
RC3H1-206ENST00000531594 TLL1O43897 1013 aa5.43□□□□□ -1.54
RC3H1-206ENST00000531594 OSBPP22059 807 aa5.42□□□□□ -1.54
RC3H1-206ENST00000531594 RNF223E7ERA6 249 aa5.41□□□□□ -1.54
RC3H1-206ENST00000531594 PPEF1O14829 653 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-206ENST00000531594 ZPR1O75312 459 aa5.41□□□□□ -1.54
RC3H1-206ENST00000531594 MYT1Q01538 1121 aa5.41□□□□□ -1.54
RC3H1-206ENST00000531594 PADI6Q6TGC4 694 aa5.41□□□□□ -1.54
RC3H1-206ENST00000531594 TTC13Q8NBP0 860 aa5.41□□□□□ -1.54
RC3H1-206ENST00000531594 NPDC1Q9NQX5 325 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-206ENST00000531594 BLOC1S3Q6QNY0 202 aa5.4□□□□□ -1.54
RC3H1-206ENST00000531594 SPDYE16A6NNV3 312 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-206ENST00000531594 CERKQ8TCT0 537 aa5.39□□□□□ -1.55
RC3H1-206ENST00000531594 TNFRSF10AO00220 468 aa5.38□□□□□ -1.55
RC3H1-206ENST00000531594 ST8SIA5O15466 376 aa5.38□□□□□ -1.55
RC3H1-206ENST00000531594 SLC19A1P41440 591 aa5.38□□□□□ -1.55
RC3H1-206ENST00000531594 SPRYD7Q5W111 196 aa5.38□□□□□ -1.55
RC3H1-206ENST00000531594 LIAT1Q6ZQX7 453 aa5.38□□□□□ -1.55
RC3H1-206ENST00000531594 PLA2G2CQ5R387 149 aa5.37□□□□□ -1.55
RC3H1-206ENST00000531594 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
RC3H1-206ENST00000531594 EYA1Q99502 592 aa5.37□□□□□ -1.55
RC3H1-206ENST00000531594 RBM27Q9P2N5 1060 aaKnown RBP5.37□□□□□ -1.55
RC3H1-206ENST00000531594 PCDHB3Q9Y5E6 796 aa5.37□□□□□ -1.55
RC3H1-206ENST00000531594 S1PR4O95977 384 aa5.36□□□□□ -1.55
RC3H1-206ENST00000531594 GGCXP38435 758 aa5.36□□□□□ -1.55
RC3H1-206ENST00000531594 E2F4Q16254 413 aa5.36□□□□□ -1.55
RC3H1-206ENST00000531594 PKDCCQ504Y2 493 aa5.36□□□□□ -1.55
RC3H1-206ENST00000531594 TMUB1Q9BVT8 246 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms