RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 C6orf132Q5T0Z8 1188 aa7.57□□□□□ -1.2
ECHDC1-221ENST00000531582 BARGINQ6ZT62 677 aa7.57□□□□□ -1.2
ECHDC1-221ENST00000531582 RBM33Q96EV2 1170 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-221ENST00000531582 FAM163AQ96GL9 167 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-221ENST00000531582 BCL2L12Q9HB09 334 aa7.57□□□□□ -1.2
ECHDC1-221ENST00000531582 PTPREP23469 700 aa7.56□□□□□ -1.2
ECHDC1-221ENST00000531582 EMP3P54852 163 aa7.56□□□□□ -1.2
ECHDC1-221ENST00000531582 PTGDRQ13258 359 aa7.56□□□□□ -1.2
ECHDC1-221ENST00000531582 GNPATO15228 680 aa7.55□□□□□ -1.2
ECHDC1-221ENST00000531582 KRI1Q8N9T8 703 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-221ENST00000531582 HRCP23327 699 aa7.54□□□□□ -1.2
ECHDC1-221ENST00000531582 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
ECHDC1-221ENST00000531582 RBM27Q9P2N5 1060 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-221ENST00000531582 MINK1Q8N4C8 1332 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-221ENST00000531582 PBX2P40425 430 aa7.53□□□□□ -1.2
ECHDC1-221ENST00000531582 ARXQ96QS3 562 aa7.53□□□□□ -1.2
ECHDC1-221ENST00000531582 PPP1R3GB7ZBB8 358 aa7.52□□□□□ -1.21
ECHDC1-221ENST00000531582 GPR37O15354 613 aa7.52□□□□□ -1.21
ECHDC1-221ENST00000531582 PRIM1P49642 420 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-221ENST00000531582 VARS2Q5ST30 1063 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-221ENST00000531582 ONECUT3O60422 494 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-221ENST00000531582 MAP2K5Q13163 448 aa7.51□□□□□ -1.21
ECHDC1-221ENST00000531582 TSR1Q2NL82 804 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-221ENST00000531582 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
ECHDC1-221ENST00000531582 AK7Q96M32 723 aa7.51□□□□□ -1.21
ECHDC1-221ENST00000531582 NPDC1Q9NQX5 325 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-221ENST00000531582 ARHGAP33O14559 1287 aa7.5□□□□□ -1.21
ECHDC1-221ENST00000531582 FAM205CA6NFA0 338 aa7.49□□□□□ -1.21
ECHDC1-221ENST00000531582 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
ECHDC1-221ENST00000531582 IRF6O14896 467 aa7.48□□□□□ -1.21
ECHDC1-221ENST00000531582 CENPBP07199 599 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-221ENST00000531582 PRSS12P56730 875 aa7.48□□□□□ -1.21
ECHDC1-221ENST00000531582 MARVELD3Q96A59 401 aa7.48□□□□□ -1.21
ECHDC1-221ENST00000531582 OATP04181 439 aa7.47□□□□□ -1.21
ECHDC1-221ENST00000531582 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-221ENST00000531582 SLC4A5Q9BY07 1137 aa7.47□□□□□ -1.21
ECHDC1-221ENST00000531582 SLC24A3Q9HC58 644 aa7.47□□□□□ -1.21
ECHDC1-221ENST00000531582 PACS2Q86VP3 889 aa7.46□□□□□ -1.22
ECHDC1-221ENST00000531582 FAM9AQ8IZU1 332 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-221ENST00000531582 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.22
ECHDC1-221ENST00000531582 HS3ST6Q96QI5 342 aa7.46□□□□□ -1.22
ECHDC1-221ENST00000531582 KCNK17Q96T54 332 aa7.46□□□□□ -1.22
ECHDC1-221ENST00000531582 TTC13Q8NBP0 860 aa7.45□□□□□ -1.22
ECHDC1-221ENST00000531582 TRIM6-TRIM34B2RNG4 842 aa7.43□□□□□ -1.22
ECHDC1-221ENST00000531582 NBPF26B4DH59 902 aa7.43□□□□□ -1.22
ECHDC1-221ENST00000531582 TK2O00142 265 aa7.43□□□□□ -1.22
ECHDC1-221ENST00000531582 COL9A1P20849 921 aa7.43□□□□□ -1.22
ECHDC1-221ENST00000531582 PADI6Q6TGC4 694 aa7.43□□□□□ -1.22
ECHDC1-221ENST00000531582 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-221ENST00000531582 FECHP22830 423 aa7.42□□□□□ -1.22
ECHDC1-221ENST00000531582 CCDC102AQ96A19 550 aa7.42□□□□□ -1.22
ECHDC1-221ENST00000531582 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
ECHDC1-221ENST00000531582 POTEB3A0JP26 581 aa7.41□□□□□ -1.22
ECHDC1-221ENST00000531582 TRIM66O15016 1216 aa7.41□□□□□ -1.22
ECHDC1-221ENST00000531582 POTEBQ6S5H4 581 aa7.41□□□□□ -1.22
ECHDC1-221ENST00000531582 RABGEF1Q9UJ41 708 aa7.41□□□□□ -1.22
ECHDC1-221ENST00000531582 PSEN2P49810 448 aa7.4□□□□□ -1.22
ECHDC1-221ENST00000531582 AMHR2Q16671 573 aa7.4□□□□□ -1.22
ECHDC1-221ENST00000531582 POTEMA6NI47 508 aa7.39□□□□□ -1.23
ECHDC1-221ENST00000531582 POTEGQ6S5H5 508 aa7.39□□□□□ -1.23
ECHDC1-221ENST00000531582 NBPF3Q9H094 633 aa7.39□□□□□ -1.23
ECHDC1-221ENST00000531582 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
ECHDC1-221ENST00000531582 ADGRG1Q9Y653 693 aa7.39□□□□□ -1.23
ECHDC1-221ENST00000531582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 CLCN1P35523 988 aa7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 PDE4DQ08499 809 aa7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 METTL3Q86U44 580 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 PXYLP1Q8TE99 480 aa7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 TATDN2Q93075 761 aa7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 AXIN2Q9Y2T1 843 aa7.38□□□□□ -1.23
ECHDC1-221ENST00000531582 HDGFP51858 240 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 LSM11P83369 360 aaKnown RBP eCLIP7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 POTEEQ6S8J3 1075 aa7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 LAPTM4BQ86VI4 370 aa7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 KIAA1468Q9P260 1216 aa7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 PNMA3Q9UL41 463 aa7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 VPS9D1Q9Y2B5 631 aa7.37□□□□□ -1.23
ECHDC1-221ENST00000531582 SLC4A3P48751 1232 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 PROX2Q3B8N5 592 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 DMRTA1Q5VZB9 504 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 NUDT18Q6ZVK8 323 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 EYA1Q99502 592 aa7.36□□□□□ -1.23
ECHDC1-221ENST00000531582 DNAJB2P25686 324 aa7.35□□□□□ -1.23
ECHDC1-221ENST00000531582 UBE2Q2Q8WVN8 375 aa7.35□□□□□ -1.23
ECHDC1-221ENST00000531582 BRPF1P55201 1214 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-221ENST00000531582 TTLL12Q14166 644 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-221ENST00000531582 GPCPD1Q9NPB8 672 aa7.34□□□□□ -1.23
ECHDC1-221ENST00000531582 FAM198AQ9UFP1 575 aa7.34□□□□□ -1.23
ECHDC1-221ENST00000531582 FAM98CQ17RN3 349 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-221ENST00000531582 RSPH4AQ5TD94 716 aa7.33□□□□□ -1.24
ECHDC1-221ENST00000531582 ADGRD1Q6QNK2 874 aa7.33□□□□□ -1.24
ECHDC1-221ENST00000531582 PCDH10Q9P2E7 1040 aa7.33□□□□□ -1.24
ECHDC1-221ENST00000531582 RCCD1A6NED2 376 aa7.32□□□□□ -1.24
ECHDC1-221ENST00000531582 BHMG1C9JSJ3 638 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-221ENST00000531582 SULF1Q8IWU6 871 aa7.32□□□□□ -1.24
ECHDC1-221ENST00000531582 MRPL50Q8N5N7 158 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-221ENST00000531582 NECTIN2Q92692 538 aa7.32□□□□□ -1.24
ECHDC1-221ENST00000531582 FAM161AQ3B820 660 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms