RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 CERKQ8TCT0 537 aa23.67■■□□□ 1.38
SNHG9-201ENST00000531523 EIF2AK4Q9P2K8 1649 aaKnown RBP23.66■■□□□ 1.38
SNHG9-201ENST00000531523 LTBP4Q8N2S1 1624 aa23.65■■□□□ 1.38
SNHG9-201ENST00000531523 MROH1Q8NDA8 1641 aa23.65■■□□□ 1.38
SNHG9-201ENST00000531523 PLA2R1Q13018 1463 aa23.64■■□□□ 1.38
SNHG9-201ENST00000531523 PZPP20742 1482 aa23.63■■□□□ 1.37
SNHG9-201ENST00000531523 KIF3BO15066 747 aa23.63■■□□□ 1.37
SNHG9-201ENST00000531523 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
SNHG9-201ENST00000531523 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
SNHG9-201ENST00000531523 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
SNHG9-201ENST00000531523 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
SNHG9-201ENST00000531523 ZC3H13Q5T200 1668 aaKnown RBP23.61■■□□□ 1.37
SNHG9-201ENST00000531523 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
SNHG9-201ENST00000531523 ABCC3O15438 1527 aa23.58■■□□□ 1.36
SNHG9-201ENST00000531523 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
SNHG9-201ENST00000531523 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
SNHG9-201ENST00000531523 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
SNHG9-201ENST00000531523 CEP152O94986 1710 aa23.56■■□□□ 1.36
SNHG9-201ENST00000531523 POLR1AO95602 1720 aaPredicted RBP23.56■■□□□ 1.36
SNHG9-201ENST00000531523 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
SNHG9-201ENST00000531523 ABCC5O15440 1437 aa23.54■■□□□ 1.36
SNHG9-201ENST00000531523 NCKAP5LQ9HCH0 1330 aa23.54■■□□□ 1.36
SNHG9-201ENST00000531523 TNRQ92752 1358 aa23.53■■□□□ 1.36
SNHG9-201ENST00000531523 NEURL4Q96JN8 1562 aa23.53■■□□□ 1.36
SNHG9-201ENST00000531523 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
SNHG9-201ENST00000531523 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
SNHG9-201ENST00000531523 SPATA31D1Q6ZQQ2 1576 aa23.52■■□□□ 1.36
SNHG9-201ENST00000531523 PRDM15P57071 1507 aaPredicted RBP23.5■■□□□ 1.35
SNHG9-201ENST00000531523 WASHC2CQ9Y4E1 1318 aa23.5■■□□□ 1.35
SNHG9-201ENST00000531523 DAPK1P53355 1430 aa23.5■■□□□ 1.35
SNHG9-201ENST00000531523 DEPDC5O75140 1603 aa23.49■■□□□ 1.35
SNHG9-201ENST00000531523 IQSEC2Q5JU85 1478 aa23.49■■□□□ 1.35
SNHG9-201ENST00000531523 PKD2Q13563 968 aa23.47■■□□□ 1.35
SNHG9-201ENST00000531523 NLRP1Q9C000 1473 aa23.47■■□□□ 1.35
SNHG9-201ENST00000531523 ERVK-7P63135 1459 aa23.45■■□□□ 1.34
SNHG9-201ENST00000531523 ERBINQ96RT1 1412 aa23.45■■□□□ 1.34
SNHG9-201ENST00000531523 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
SNHG9-201ENST00000531523 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
SNHG9-201ENST00000531523 ZNF335Q9H4Z2 1342 aaPredicted RBP23.42■■□□□ 1.34
SNHG9-201ENST00000531523 APLP2Q06481 763 aa23.42■■□□□ 1.34
SNHG9-201ENST00000531523 CFAP65Q6ZU64 1925 aaKnown RBP23.4■■□□□ 1.34
SNHG9-201ENST00000531523 UBR1Q8IWV7 1749 aa23.39■■□□□ 1.34
SNHG9-201ENST00000531523 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
SNHG9-201ENST00000531523 ADGRL2O95490 1459 aa23.37■■□□□ 1.33
SNHG9-201ENST00000531523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.33
SNHG9-201ENST00000531523 MED14O60244 1454 aa23.36■■□□□ 1.33
SNHG9-201ENST00000531523 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
SNHG9-201ENST00000531523 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
SNHG9-201ENST00000531523 IQGAP1P46940 1657 aa23.34■■□□□ 1.33
SNHG9-201ENST00000531523 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.33
SNHG9-201ENST00000531523 ANKRD30AQ9BXX3 1397 aa23.3■■□□□ 1.32
SNHG9-201ENST00000531523 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
SNHG9-201ENST00000531523 NPHP4O75161 1426 aaPredicted RBP23.28■■□□□ 1.32
SNHG9-201ENST00000531523 THEMISQ8N1K5 641 aaPredicted RBP23.28■■□□□ 1.32
SNHG9-201ENST00000531523 PIK3C2BO00750 1634 aa23.28■■□□□ 1.32
SNHG9-201ENST00000531523 CPS1P31327 1500 aa23.28■■□□□ 1.32
SNHG9-201ENST00000531523 CHIC2Q9UKJ5 165 aa23.27■■□□□ 1.32
SNHG9-201ENST00000531523 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
SNHG9-201ENST00000531523 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
SNHG9-201ENST00000531523 SLIT1O75093 1534 aa23.26■■□□□ 1.31
SNHG9-201ENST00000531523 SYNMO15061 1565 aa23.26■■□□□ 1.31
SNHG9-201ENST00000531523 ANKLE2Q86XL3 938 aa23.25■■□□□ 1.31
SNHG9-201ENST00000531523 KDM5AP29375 1690 aaKnown RBP23.25■■□□□ 1.31
SNHG9-201ENST00000531523 ALKQ9UM73 1620 aa23.21■■□□□ 1.31
SNHG9-201ENST00000531523 UNC13BO14795 1591 aa23.2■■□□□ 1.3
SNHG9-201ENST00000531523 SCAF11Q99590 1463 aaKnown RBP23.2■■□□□ 1.3
SNHG9-201ENST00000531523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNHG9-201ENST00000531523 NOS1P29475 1434 aa23.19■■□□□ 1.3
SNHG9-201ENST00000531523 KANK1Q14678 1352 aa23.19■■□□□ 1.3
SNHG9-201ENST00000531523 ANKRD50Q9ULJ7 1429 aa23.18■■□□□ 1.3
SNHG9-201ENST00000531523 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
SNHG9-201ENST00000531523 TET3O43151 1660 aa23.17■■□□□ 1.3
SNHG9-201ENST00000531523 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
SNHG9-201ENST00000531523 ADGRB3O60242 1522 aa23.14■■□□□ 1.3
SNHG9-201ENST00000531523 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
SNHG9-201ENST00000531523 LTKP29376 864 aa23.13■■□□□ 1.29
SNHG9-201ENST00000531523 RPRD2Q5VT52 1461 aaKnown RBP23.12■■□□□ 1.29
SNHG9-201ENST00000531523 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
SNHG9-201ENST00000531523 MYO5BQ9ULV0 1848 aa23.12■■□□□ 1.29
SNHG9-201ENST00000531523 LRRC7Q96NW7 1537 aa23.12■■□□□ 1.29
SNHG9-201ENST00000531523 TMEM2Q9UHN6 1383 aa23.11■■□□□ 1.29
SNHG9-201ENST00000531523 ROCK1Q13464 1354 aa23.1■■□□□ 1.29
SNHG9-201ENST00000531523 E9PCH4 1651 aa23.09■■□□□ 1.29
SNHG9-201ENST00000531523 IQGAP3Q86VI3 1631 aa23.09■■□□□ 1.29
SNHG9-201ENST00000531523 IDI1Q13907 227 aa23.08■■□□□ 1.29
SNHG9-201ENST00000531523 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
SNHG9-201ENST00000531523 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
SNHG9-201ENST00000531523 DISP3Q9P2K9 1392 aa23.03■■□□□ 1.28
SNHG9-201ENST00000531523 ZFYVE9O95405 1425 aa23■■□□□ 1.27
SNHG9-201ENST00000531523 NWD1Q149M9 1564 aa22.99■■□□□ 1.27
SNHG9-201ENST00000531523 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
SNHG9-201ENST00000531523 TOM1O60784 492 aa22.98■■□□□ 1.27
SNHG9-201ENST00000531523 ILDR2Q71H61 639 aa22.98■■□□□ 1.27
SNHG9-201ENST00000531523 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
SNHG9-201ENST00000531523 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
SNHG9-201ENST00000531523 PIP4K2BP78356 416 aa22.96■■□□□ 1.27
SNHG9-201ENST00000531523 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
SNHG9-201ENST00000531523 HSPA1LP34931 641 aa22.95■■□□□ 1.26
SNHG9-201ENST00000531523 STAG3Q9UJ98 1225 aa22.95■■□□□ 1.26
SNHG9-201ENST00000531523 MED1Q15648 1581 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms