RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
IFT46-208ENST00000531201 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
IFT46-208ENST00000531201 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
IFT46-208ENST00000531201 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
IFT46-208ENST00000531201 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
IFT46-208ENST00000531201 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
IFT46-208ENST00000531201 KDM5CP41229 1560 aa13.17□□□□□ -0.3
IFT46-208ENST00000531201 ERCC6L2Q5T890 1561 aa13.17□□□□□ -0.3
IFT46-208ENST00000531201 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
IFT46-208ENST00000531201 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
IFT46-208ENST00000531201 ARAP3Q8WWN8 1544 aa13.15□□□□□ -0.3
IFT46-208ENST00000531201 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
IFT46-208ENST00000531201 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
IFT46-208ENST00000531201 PKD2Q13563 968 aa13.15□□□□□ -0.3
IFT46-208ENST00000531201 NUP155O75694 1391 aa13.15□□□□□ -0.31
IFT46-208ENST00000531201 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
IFT46-208ENST00000531201 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
IFT46-208ENST00000531201 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
IFT46-208ENST00000531201 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
IFT46-208ENST00000531201 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
IFT46-208ENST00000531201 ABCC1P33527 1531 aa13.12□□□□□ -0.31
IFT46-208ENST00000531201 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
IFT46-208ENST00000531201 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
IFT46-208ENST00000531201 LAMC1P11047 1609 aa13.1□□□□□ -0.31
IFT46-208ENST00000531201 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
IFT46-208ENST00000531201 USP47Q96K76 1375 aa13.1□□□□□ -0.31
IFT46-208ENST00000531201 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
IFT46-208ENST00000531201 PLCH2O75038 1416 aa13.09□□□□□ -0.31
IFT46-208ENST00000531201 KIF7Q2M1P5 1343 aa13.08□□□□□ -0.31
IFT46-208ENST00000531201 TRPM1Q7Z4N2 1603 aa13.08□□□□□ -0.32
IFT46-208ENST00000531201 ATP10AO60312 1499 aa13.08□□□□□ -0.32
IFT46-208ENST00000531201 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
IFT46-208ENST00000531201 C11orf95C9JLR9 678 aaPredicted RBP13.06□□□□□ -0.32
IFT46-208ENST00000531201 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
IFT46-208ENST00000531201 E9PCH4 1651 aa13.05□□□□□ -0.32
IFT46-208ENST00000531201 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
IFT46-208ENST00000531201 KCNA4P22459 653 aa13.04□□□□□ -0.32
IFT46-208ENST00000531201 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
IFT46-208ENST00000531201 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
IFT46-208ENST00000531201 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.32
IFT46-208ENST00000531201 ZFYVE16Q7Z3T8 1539 aa13.02□□□□□ -0.32
IFT46-208ENST00000531201 DEPDC5O75140 1603 aa13.02□□□□□ -0.32
IFT46-208ENST00000531201 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.33
IFT46-208ENST00000531201 NEFLP07196 543 aa13.01□□□□□ -0.33
IFT46-208ENST00000531201 PRAG1Q86YV5 1406 aa13.01□□□□□ -0.33
IFT46-208ENST00000531201 PLA2R1Q13018 1463 aa13.01□□□□□ -0.33
IFT46-208ENST00000531201 INO80Q9ULG1 1556 aaPredicted RBP13.01□□□□□ -0.33
IFT46-208ENST00000531201 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
IFT46-208ENST00000531201 EFCAB2Q5VUJ9 269 aa13□□□□□ -0.33
IFT46-208ENST00000531201 WDR7Q9Y4E6 1490 aa12.99□□□□□ -0.33
IFT46-208ENST00000531201 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
IFT46-208ENST00000531201 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
IFT46-208ENST00000531201 A2MP01023 1474 aa12.99□□□□□ -0.33
IFT46-208ENST00000531201 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
IFT46-208ENST00000531201 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
IFT46-208ENST00000531201 TRPM2O94759 1503 aa12.97□□□□□ -0.33
IFT46-208ENST00000531201 CEP152O94986 1710 aa12.96□□□□□ -0.33
IFT46-208ENST00000531201 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
IFT46-208ENST00000531201 TET3O43151 1660 aa12.96□□□□□ -0.33
IFT46-208ENST00000531201 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.33
IFT46-208ENST00000531201 FKBP8Q14318 412 aa12.96□□□□□ -0.34
IFT46-208ENST00000531201 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.34
IFT46-208ENST00000531201 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.34
IFT46-208ENST00000531201 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.34
IFT46-208ENST00000531201 VWDEQ8N2E2 1590 aa12.95□□□□□ -0.34
IFT46-208ENST00000531201 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
IFT46-208ENST00000531201 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
IFT46-208ENST00000531201 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
IFT46-208ENST00000531201 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
IFT46-208ENST00000531201 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
IFT46-208ENST00000531201 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
IFT46-208ENST00000531201 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
IFT46-208ENST00000531201 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
IFT46-208ENST00000531201 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
IFT46-208ENST00000531201 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
IFT46-208ENST00000531201 FANCAO15360 1455 aa12.91□□□□□ -0.34
IFT46-208ENST00000531201 PTPRTO14522 1441 aa12.91□□□□□ -0.34
IFT46-208ENST00000531201 IQGAP1P46940 1657 aa12.9□□□□□ -0.34
IFT46-208ENST00000531201 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
IFT46-208ENST00000531201 KIAA1210Q9ULL0 1709 aa12.89□□□□□ -0.35
IFT46-208ENST00000531201 MROH1Q8NDA8 1641 aa12.89□□□□□ -0.35
IFT46-208ENST00000531201 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
IFT46-208ENST00000531201 POLA2Q14181 598 aa12.88□□□□□ -0.35
IFT46-208ENST00000531201 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
IFT46-208ENST00000531201 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
IFT46-208ENST00000531201 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
IFT46-208ENST00000531201 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
IFT46-208ENST00000531201 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
IFT46-208ENST00000531201 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
IFT46-208ENST00000531201 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
IFT46-208ENST00000531201 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
IFT46-208ENST00000531201 SMG6Q86US8 1419 aaKnown RBP12.85□□□□□ -0.35
IFT46-208ENST00000531201 RALBP1Q15311 655 aa12.85□□□□□ -0.35
IFT46-208ENST00000531201 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
IFT46-208ENST00000531201 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
IFT46-208ENST00000531201 KIDINS220Q9ULH0 1771 aa12.85□□□□□ -0.35
IFT46-208ENST00000531201 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
IFT46-208ENST00000531201 FAM9BQ8IZU0 186 aa12.85□□□□□ -0.35
IFT46-208ENST00000531201 EFCAB6Q5THR3 1501 aa12.84□□□□□ -0.35
IFT46-208ENST00000531201 KANK1Q14678 1352 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms