RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 DHX29Q7Z478 1369 aaKnown RBP23.66■■□□□ 1.38
BRCA2-204ENST00000530893 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
BRCA2-204ENST00000530893 ARAP3Q8WWN8 1544 aa23.65■■□□□ 1.38
BRCA2-204ENST00000530893 EFCAB2Q5VUJ9 269 aa23.64■■□□□ 1.37
BRCA2-204ENST00000530893 ABCC1P33527 1531 aa23.64■■□□□ 1.37
BRCA2-204ENST00000530893 ATP10AO60312 1499 aa23.63■■□□□ 1.37
BRCA2-204ENST00000530893 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
BRCA2-204ENST00000530893 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
BRCA2-204ENST00000530893 TRPM1Q7Z4N2 1603 aa23.6■■□□□ 1.37
BRCA2-204ENST00000530893 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
BRCA2-204ENST00000530893 ZBED9Q6R2W3 1325 aa23.59■■□□□ 1.37
BRCA2-204ENST00000530893 PLA2R1Q13018 1463 aa23.59■■□□□ 1.37
BRCA2-204ENST00000530893 LAMC1P11047 1609 aa23.57■■□□□ 1.36
BRCA2-204ENST00000530893 BCANQ96GW7 911 aa23.57■■□□□ 1.36
BRCA2-204ENST00000530893 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
BRCA2-204ENST00000530893 FAM9BQ8IZU0 186 aa23.55■■□□□ 1.36
BRCA2-204ENST00000530893 RTEL1-TNFRSF6BF6WH68 1400 aa23.55■■□□□ 1.36
BRCA2-204ENST00000530893 GPRASP1Q5JY77 1395 aa23.55■■□□□ 1.36
BRCA2-204ENST00000530893 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
BRCA2-204ENST00000530893 TSHZ2Q9NRE2 1034 aa23.54■■□□□ 1.36
BRCA2-204ENST00000530893 EIF2AK4Q9P2K8 1649 aaKnown RBP23.54■■□□□ 1.36
BRCA2-204ENST00000530893 ERICH6BQ5W0A0 696 aa23.54■■□□□ 1.36
BRCA2-204ENST00000530893 ST20-MTHFSA0A0A6YYL1 179 aa23.53■■□□□ 1.36
BRCA2-204ENST00000530893 E9PCH4 1651 aa23.52■■□□□ 1.36
BRCA2-204ENST00000530893 A2MP01023 1474 aa23.52■■□□□ 1.36
BRCA2-204ENST00000530893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
BRCA2-204ENST00000530893 TRAPPC8Q9Y2L5 1435 aa23.5■■□□□ 1.35
BRCA2-204ENST00000530893 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
BRCA2-204ENST00000530893 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
BRCA2-204ENST00000530893 PRDM15P57071 1507 aaPredicted RBP23.47■■□□□ 1.35
BRCA2-204ENST00000530893 ZFYVE16Q7Z3T8 1539 aa23.47■■□□□ 1.35
BRCA2-204ENST00000530893 SPAG9O60271 1321 aaKnown RBP23.45■■□□□ 1.34
BRCA2-204ENST00000530893 ABCA9Q8IUA7 1624 aa23.45■■□□□ 1.34
BRCA2-204ENST00000530893 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
BRCA2-204ENST00000530893 RALBP1Q15311 655 aa23.42■■□□□ 1.34
BRCA2-204ENST00000530893 RGL3Q3MIN7 710 aa23.42■■□□□ 1.34
BRCA2-204ENST00000530893 INO80Q9ULG1 1556 aaPredicted RBP23.4■■□□□ 1.34
BRCA2-204ENST00000530893 BRD4O60885 1362 aaPredicted RBP23.39■■□□□ 1.34
BRCA2-204ENST00000530893 RNF17Q9BXT8 1623 aaKnown RBP23.39■■□□□ 1.34
BRCA2-204ENST00000530893 STAC3Q96MF2 364 aa23.39■■□□□ 1.34
BRCA2-204ENST00000530893 TRPM2O94759 1503 aa23.39■■□□□ 1.33
BRCA2-204ENST00000530893 FANCAO15360 1455 aa23.38■■□□□ 1.33
BRCA2-204ENST00000530893 COL17A1Q9UMD9 1497 aaPredicted RBP23.38■■□□□ 1.33
BRCA2-204ENST00000530893 MYBBP1AQ9BQG0 1328 aaKnown RBP23.37■■□□□ 1.33
BRCA2-204ENST00000530893 ATP7AQ04656 1500 aa23.37■■□□□ 1.33
BRCA2-204ENST00000530893 PNISRQ8TF01 805 aaKnown RBP23.37■■□□□ 1.33
BRCA2-204ENST00000530893 SMG6Q86US8 1419 aaKnown RBP23.36■■□□□ 1.33
BRCA2-204ENST00000530893 TET3O43151 1660 aa23.36■■□□□ 1.33
BRCA2-204ENST00000530893 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
BRCA2-204ENST00000530893 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
BRCA2-204ENST00000530893 PTPRTO14522 1441 aa23.36■■□□□ 1.33
BRCA2-204ENST00000530893 CEP152O94986 1710 aa23.35■■□□□ 1.33
BRCA2-204ENST00000530893 SPHKAPQ2M3C7 1700 aa23.35■■□□□ 1.33
BRCA2-204ENST00000530893 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
BRCA2-204ENST00000530893 MYT1Q01538 1121 aa23.35■■□□□ 1.33
BRCA2-204ENST00000530893 AFAP1Q8N556 730 aa23.35■■□□□ 1.33
BRCA2-204ENST00000530893 VWDEQ8N2E2 1590 aa23.33■■□□□ 1.33
BRCA2-204ENST00000530893 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
BRCA2-204ENST00000530893 NEURL4Q96JN8 1562 aa23.32■■□□□ 1.32
BRCA2-204ENST00000530893 TESK2Q96S53 571 aa23.32■■□□□ 1.32
BRCA2-204ENST00000530893 KANK1Q14678 1352 aa23.31■■□□□ 1.32
BRCA2-204ENST00000530893 PPP4R2Q9NY27 417 aa23.31■■□□□ 1.32
BRCA2-204ENST00000530893 MADDQ8WXG6 1647 aa23.31■■□□□ 1.32
BRCA2-204ENST00000530893 PARD3Q8TEW0 1356 aa23.3■■□□□ 1.32
BRCA2-204ENST00000530893 ADGRL1O94910 1474 aa23.3■■□□□ 1.32
BRCA2-204ENST00000530893 ASXL2Q76L83 1435 aa23.27■■□□□ 1.32
BRCA2-204ENST00000530893 TMF1P82094 1093 aa23.27■■□□□ 1.32
BRCA2-204ENST00000530893 NUDCQ9Y266 331 aa23.27■■□□□ 1.32
BRCA2-204ENST00000530893 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
BRCA2-204ENST00000530893 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
BRCA2-204ENST00000530893 NLRP13Q86W25 1043 aa23.26■■□□□ 1.31
BRCA2-204ENST00000530893 IQGAP1P46940 1657 aa23.25■■□□□ 1.31
BRCA2-204ENST00000530893 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
BRCA2-204ENST00000530893 IRX6P78412 446 aaPredicted RBP23.25■■□□□ 1.31
BRCA2-204ENST00000530893 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
BRCA2-204ENST00000530893 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
BRCA2-204ENST00000530893 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
BRCA2-204ENST00000530893 RNF123Q5XPI4 1314 aa23.21■■□□□ 1.31
BRCA2-204ENST00000530893 ZMYM4Q5VZL5 1548 aa23.21■■□□□ 1.31
BRCA2-204ENST00000530893 MROH1Q8NDA8 1641 aa23.21■■□□□ 1.31
BRCA2-204ENST00000530893 INSRP06213 1382 aa23.21■■□□□ 1.31
BRCA2-204ENST00000530893 CFAP74Q9C0B2 1584 aa23.19■■□□□ 1.3
BRCA2-204ENST00000530893 ZNF518AQ6AHZ1 1483 aa23.19■■□□□ 1.3
BRCA2-204ENST00000530893 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
BRCA2-204ENST00000530893 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
BRCA2-204ENST00000530893 KIF3BO15066 747 aa23.17■■□□□ 1.3
BRCA2-204ENST00000530893 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
BRCA2-204ENST00000530893 CDCA8Q53HL2 280 aa23.16■■□□□ 1.3
BRCA2-204ENST00000530893 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
BRCA2-204ENST00000530893 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
BRCA2-204ENST00000530893 PANK3Q9H999 370 aa23.15■■□□□ 1.3
BRCA2-204ENST00000530893 MYOM2P54296 1465 aa23.14■■□□□ 1.29
BRCA2-204ENST00000530893 NPM1P06748 294 aaKnown RBP eCLIP23.13■■□□□ 1.29
BRCA2-204ENST00000530893 EIF3AQ14152 1382 aaKnown RBP23.13■■□□□ 1.29
BRCA2-204ENST00000530893 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
BRCA2-204ENST00000530893 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
BRCA2-204ENST00000530893 KIF1BO60333 1816 aa23.12■■□□□ 1.29
BRCA2-204ENST00000530893 SYNMO15061 1565 aa23.11■■□□□ 1.29
BRCA2-204ENST00000530893 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
BRCA2-204ENST00000530893 PDE3BQ13370 1112 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms