RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 FAM43AQ8N2R8 423 aa23.92■■□□□ 1.42
RPL38-205ENST00000530646 ZNF777Q9ULD5 760 aaPredicted RBP23.92■■□□□ 1.42
RPL38-205ENST00000530646 USP47Q96K76 1375 aa23.89■■□□□ 1.42
RPL38-205ENST00000530646 PLEKHD1A6NEE1 506 aa23.88■■□□□ 1.41
RPL38-205ENST00000530646 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
RPL38-205ENST00000530646 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
RPL38-205ENST00000530646 ARID4BQ4LE39 1312 aaPredicted RBP23.87■■□□□ 1.41
RPL38-205ENST00000530646 BRD4O60885 1362 aaPredicted RBP23.86■■□□□ 1.41
RPL38-205ENST00000530646 CFDP1Q9UEE9 299 aaPredicted RBP23.85■■□□□ 1.41
RPL38-205ENST00000530646 MBD5Q9P267 1494 aa23.84■■□□□ 1.41
RPL38-205ENST00000530646 FRAT2O75474 233 aaPredicted RBP23.84■■□□□ 1.41
RPL38-205ENST00000530646 KDM5CP41229 1560 aa23.83■■□□□ 1.41
RPL38-205ENST00000530646 KIF15Q9NS87 1388 aa23.83■■□□□ 1.4
RPL38-205ENST00000530646 PLIN1O60240 522 aa23.83■■□□□ 1.4
RPL38-205ENST00000530646 DAXXQ9UER7 740 aaPredicted RBP23.83■■□□□ 1.4
RPL38-205ENST00000530646 MYBBP1AQ9BQG0 1328 aaKnown RBP23.82■■□□□ 1.4
RPL38-205ENST00000530646 GPATCH8Q9UKJ3 1502 aaKnown RBP23.82■■□□□ 1.4
RPL38-205ENST00000530646 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
RPL38-205ENST00000530646 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
RPL38-205ENST00000530646 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
RPL38-205ENST00000530646 CRBNQ96SW2 442 aa23.81■■□□□ 1.4
RPL38-205ENST00000530646 CDCA7LQ96GN5 454 aa23.78■■□□□ 1.4
RPL38-205ENST00000530646 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
RPL38-205ENST00000530646 ZMYND15Q9H091 742 aa23.77■■□□□ 1.4
RPL38-205ENST00000530646 ABCC5O15440 1437 aa23.77■■□□□ 1.4
RPL38-205ENST00000530646 DAPK1P53355 1430 aa23.77■■□□□ 1.39
RPL38-205ENST00000530646 RALBP1Q15311 655 aa23.75■■□□□ 1.39
RPL38-205ENST00000530646 CAMSAP2Q08AD1 1489 aa23.74■■□□□ 1.39
RPL38-205ENST00000530646 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
RPL38-205ENST00000530646 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
RPL38-205ENST00000530646 KDM2BQ8NHM5 1336 aa23.73■■□□□ 1.39
RPL38-205ENST00000530646 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
RPL38-205ENST00000530646 ADCY10Q96PN6 1610 aa23.73■■□□□ 1.39
RPL38-205ENST00000530646 C8orf34Q49A92 452 aa23.72■■□□□ 1.39
RPL38-205ENST00000530646 VSIG10Q8N0Z9 540 aa23.72■■□□□ 1.39
RPL38-205ENST00000530646 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
RPL38-205ENST00000530646 FAM161AQ3B820 660 aa23.7■■□□□ 1.38
RPL38-205ENST00000530646 RRAGDQ9NQL2 400 aaPredicted RBP23.7■■□□□ 1.38
RPL38-205ENST00000530646 GLIPR1L2Q4G1C9 344 aa23.69■■□□□ 1.38
RPL38-205ENST00000530646 CDC42BPAQ5VT25 1732 aa23.69■■□□□ 1.38
RPL38-205ENST00000530646 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
RPL38-205ENST00000530646 PZPP20742 1482 aa23.68■■□□□ 1.38
RPL38-205ENST00000530646 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
RPL38-205ENST00000530646 ABCC2Q92887 1545 aa23.66■■□□□ 1.38
RPL38-205ENST00000530646 E9PCH4 1651 aa23.66■■□□□ 1.38
RPL38-205ENST00000530646 HNRNPMP52272 730 aaKnown RBP eCLIP23.66■■□□□ 1.38
RPL38-205ENST00000530646 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
RPL38-205ENST00000530646 NLRP13Q86W25 1043 aa23.65■■□□□ 1.38
RPL38-205ENST00000530646 CENPQQ7L2Z9 268 aaPredicted RBP23.64■■□□□ 1.37
RPL38-205ENST00000530646 POGKQ9P215 609 aa23.62■■□□□ 1.37
RPL38-205ENST00000530646 RALGAPBQ86X10 1494 aa23.62■■□□□ 1.37
RPL38-205ENST00000530646 PARD3Q8TEW0 1356 aa23.61■■□□□ 1.37
RPL38-205ENST00000530646 UHRF1BP1Q6BDS2 1440 aa23.59■■□□□ 1.37
RPL38-205ENST00000530646 CARD11Q9BXL7 1154 aa23.59■■□□□ 1.37
RPL38-205ENST00000530646 TTC37Q6PGP7 1564 aa23.58■■□□□ 1.37
RPL38-205ENST00000530646 ST20-MTHFSA0A0A6YYL1 179 aa23.58■■□□□ 1.37
RPL38-205ENST00000530646 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
RPL38-205ENST00000530646 KIAA1107Q9UPP5 1409 aa23.58■■□□□ 1.36
RPL38-205ENST00000530646 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
RPL38-205ENST00000530646 ZCCHC11Q5TAX3 1644 aaKnown RBP23.56■■□□□ 1.36
RPL38-205ENST00000530646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.36
RPL38-205ENST00000530646 CDC42BPBQ9Y5S2 1711 aa23.55■■□□□ 1.36
RPL38-205ENST00000530646 INSRP06213 1382 aa23.51■■□□□ 1.35
RPL38-205ENST00000530646 RGS3P49796 1198 aa23.51■■□□□ 1.35
RPL38-205ENST00000530646 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
RPL38-205ENST00000530646 ZMYM4Q5VZL5 1548 aa23.5■■□□□ 1.35
RPL38-205ENST00000530646 PKD2Q13563 968 aa23.5■■□□□ 1.35
RPL38-205ENST00000530646 L1TD1Q5T7N2 865 aaKnown RBP23.5■■□□□ 1.35
RPL38-205ENST00000530646 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
RPL38-205ENST00000530646 USP19O94966 1318 aa23.49■■□□□ 1.35
RPL38-205ENST00000530646 CROCC2H7BZ55 1655 aa23.48■■□□□ 1.35
RPL38-205ENST00000530646 ARHGAP5Q13017 1502 aa23.48■■□□□ 1.35
RPL38-205ENST00000530646 C9orf84Q5VXU9 1444 aa23.48■■□□□ 1.35
RPL38-205ENST00000530646 PLEKHH2Q8IVE3 1493 aa23.48■■□□□ 1.35
RPL38-205ENST00000530646 PREX2Q70Z35 1606 aa23.48■■□□□ 1.35
RPL38-205ENST00000530646 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
RPL38-205ENST00000530646 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
RPL38-205ENST00000530646 HSP90AA2PQ14568 343 aaPredicted RBP23.47■■□□□ 1.35
RPL38-205ENST00000530646 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
RPL38-205ENST00000530646 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
RPL38-205ENST00000530646 ANKRD30AQ9BXX3 1397 aa23.45■■□□□ 1.35
RPL38-205ENST00000530646 RRP9O43818 475 aaKnown RBP23.44■■□□□ 1.34
RPL38-205ENST00000530646 PODXL2Q9NZ53 605 aa23.44■■□□□ 1.34
RPL38-205ENST00000530646 SYCP2Q9BX26 1530 aa23.44■■□□□ 1.34
RPL38-205ENST00000530646 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
RPL38-205ENST00000530646 NAP1L5Q96NT1 182 aaPredicted RBP23.43■■□□□ 1.34
RPL38-205ENST00000530646 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
RPL38-205ENST00000530646 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
RPL38-205ENST00000530646 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
RPL38-205ENST00000530646 ANKRD50Q9ULJ7 1429 aa23.41■■□□□ 1.34
RPL38-205ENST00000530646 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
RPL38-205ENST00000530646 DUSP27Q5VZP5 1158 aa23.4■■□□□ 1.34
RPL38-205ENST00000530646 CC2D1BQ5T0F9 858 aaKnown RBP23.39■■□□□ 1.34
RPL38-205ENST00000530646 SLKQ9H2G2 1235 aaPredicted RBP23.39■■□□□ 1.34
RPL38-205ENST00000530646 XRCC6P12956 609 aaKnown RBP eCLIP23.39■■□□□ 1.33
RPL38-205ENST00000530646 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
RPL38-205ENST00000530646 CLCN1P35523 988 aa23.38■■□□□ 1.33
RPL38-205ENST00000530646 MYO5CQ9NQX4 1742 aa23.38■■□□□ 1.33
RPL38-205ENST00000530646 HSP90AA1P07900 732 aaKnown RBP23.38■■□□□ 1.33
RPL38-205ENST00000530646 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms