RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 KIF3BO15066 747 aa35.65■■■■□ 3.3
PACSIN3-207ENST00000530513 POLR1AO95602 1720 aaPredicted RBP35.65■■■■□ 3.3
PACSIN3-207ENST00000530513 PZPP20742 1482 aa35.63■■■■□ 3.29
PACSIN3-207ENST00000530513 LOC105371045A0A1W2PR82 267 aa35.62■■■■□ 3.29
PACSIN3-207ENST00000530513 MAST1Q9Y2H9 1570 aa35.62■■■■□ 3.29
PACSIN3-207ENST00000530513 RSPH4AQ5TD94 716 aa35.61■■■■□ 3.29
PACSIN3-207ENST00000530513 RNF17Q9BXT8 1623 aaKnown RBP35.6■■■■□ 3.29
PACSIN3-207ENST00000530513 ZNF335Q9H4Z2 1342 aaPredicted RBP35.59■■■■□ 3.29
PACSIN3-207ENST00000530513 PKD2Q13563 968 aa35.59■■■■□ 3.29
PACSIN3-207ENST00000530513 MAP3K1Q13233 1512 aa35.57■■■■□ 3.29
PACSIN3-207ENST00000530513 TNRQ92752 1358 aa35.57■■■■□ 3.28
PACSIN3-207ENST00000530513 NEURL4Q96JN8 1562 aa35.56■■■■□ 3.28
PACSIN3-207ENST00000530513 FBXO31Q5XUX0 539 aaPredicted RBP35.55■■■■□ 3.28
PACSIN3-207ENST00000530513 EIF2AK4Q9P2K8 1649 aaKnown RBP35.54■■■■□ 3.28
PACSIN3-207ENST00000530513 ZC3H13Q5T200 1668 aaKnown RBP35.53■■■■□ 3.28
PACSIN3-207ENST00000530513 KANK4Q5T7N3 995 aaPredicted RBP35.51■■■■□ 3.28
PACSIN3-207ENST00000530513 WASHC2CQ9Y4E1 1318 aa35.51■■■■□ 3.27
PACSIN3-207ENST00000530513 TSPY4P0CV99 314 aa35.5■■■■□ 3.27
PACSIN3-207ENST00000530513 TSPY10P0CW01 314 aa35.5■■■■□ 3.27
PACSIN3-207ENST00000530513 MYOM3Q5VTT5 1437 aa35.49■■■■□ 3.27
PACSIN3-207ENST00000530513 MROH1Q8NDA8 1641 aa35.49■■■■□ 3.27
PACSIN3-207ENST00000530513 ABCC3O15438 1527 aa35.47■■■■□ 3.27
PACSIN3-207ENST00000530513 CROCC2H7BZ55 1655 aa35.46■■■■□ 3.27
PACSIN3-207ENST00000530513 CEP152O94986 1710 aa35.46■■■■□ 3.27
PACSIN3-207ENST00000530513 MIA2Q96PC5 1412 aa35.45■■■■□ 3.27
PACSIN3-207ENST00000530513 SPATA31D1Q6ZQQ2 1576 aa35.45■■■■□ 3.27
PACSIN3-207ENST00000530513 NLRP1Q9C000 1473 aa35.43■■■■□ 3.26
PACSIN3-207ENST00000530513 DISP3Q9P2K9 1392 aa35.42■■■■□ 3.26
PACSIN3-207ENST00000530513 UGGT1Q9NYU2 1555 aa35.41■■■■□ 3.26
PACSIN3-207ENST00000530513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.37■■■■□ 3.25
PACSIN3-207ENST00000530513 DEPDC5O75140 1603 aa35.36■■■■□ 3.25
PACSIN3-207ENST00000530513 DUOX2Q9NRD8 1548 aa35.36■■■■□ 3.25
PACSIN3-207ENST00000530513 PTPN23Q9H3S7 1636 aa35.35■■■■□ 3.25
PACSIN3-207ENST00000530513 ERVK-7P63135 1459 aa35.33■■■■□ 3.25
PACSIN3-207ENST00000530513 UBAP1LF5GYI3 381 aa35.32■■■■□ 3.24
PACSIN3-207ENST00000530513 VWDEQ8N2E2 1590 aa35.32■■■■□ 3.24
PACSIN3-207ENST00000530513 IQGAP1P46940 1657 aa35.31■■■■□ 3.24
PACSIN3-207ENST00000530513 SHANK2Q9UPX8 1470 aa35.31■■■■□ 3.24
PACSIN3-207ENST00000530513 CFAP65Q6ZU64 1925 aaKnown RBP35.31■■■■□ 3.24
PACSIN3-207ENST00000530513 CPS1P31327 1500 aa35.31■■■■□ 3.24
PACSIN3-207ENST00000530513 PRDM15P57071 1507 aaPredicted RBP35.29■■■■□ 3.24
PACSIN3-207ENST00000530513 MED14O60244 1454 aa35.28■■■■□ 3.24
PACSIN3-207ENST00000530513 UBR1Q8IWV7 1749 aa35.27■■■■□ 3.24
PACSIN3-207ENST00000530513 ILDR2Q71H61 639 aa35.27■■■■□ 3.24
PACSIN3-207ENST00000530513 THEMISQ8N1K5 641 aaPredicted RBP35.26■■■■□ 3.24
PACSIN3-207ENST00000530513 NPHP4O75161 1426 aaPredicted RBP35.25■■■■□ 3.23
PACSIN3-207ENST00000530513 ANKLE2Q86XL3 938 aa35.25■■■■□ 3.23
PACSIN3-207ENST00000530513 ABCC5O15440 1437 aa35.24■■■■□ 3.23
PACSIN3-207ENST00000530513 KIF15Q9NS87 1388 aa35.24■■■■□ 3.23
PACSIN3-207ENST00000530513 ERBINQ96RT1 1412 aa35.21■■■■□ 3.23
PACSIN3-207ENST00000530513 STRCP1A6NGW2 1772 aa35.2■■■■□ 3.23
PACSIN3-207ENST00000530513 DAPK1P53355 1430 aa35.19■■■■□ 3.22
PACSIN3-207ENST00000530513 FGD6Q6ZV73 1430 aa35.17■■■■□ 3.22
PACSIN3-207ENST00000530513 ALKQ9UM73 1620 aa35.11■■■■□ 3.21
PACSIN3-207ENST00000530513 APLP2Q06481 763 aa35.11■■■■□ 3.21
PACSIN3-207ENST00000530513 RRP7BPQ9NSQ0 103 aa35.11■■■■□ 3.21
PACSIN3-207ENST00000530513 ARHGAP31Q2M1Z3 1444 aa35.11■■■■□ 3.21
PACSIN3-207ENST00000530513 SYNMO15061 1565 aa35.1■■■■□ 3.21
PACSIN3-207ENST00000530513 PIK3C2BO00750 1634 aa35.09■■■■□ 3.21
PACSIN3-207ENST00000530513 SLIT1O75093 1534 aa35.06■■■■□ 3.2
PACSIN3-207ENST00000530513 SCAF1Q9H7N4 1312 aaKnown RBP35.06■■■■□ 3.2
PACSIN3-207ENST00000530513 SCAF11Q99590 1463 aaKnown RBP35.05■■■■□ 3.2
PACSIN3-207ENST00000530513 ARHGAP23Q9P227 1491 aa35.05■■■■□ 3.2
PACSIN3-207ENST00000530513 PIP4K2BP78356 416 aa35.04■■■■□ 3.2
PACSIN3-207ENST00000530513 LRRC7Q96NW7 1537 aa35.01■■■■□ 3.2
PACSIN3-207ENST00000530513 SOCS7O14512 581 aa35.01■■■■□ 3.2
PACSIN3-207ENST00000530513 TOM1O60784 492 aa35.01■■■■□ 3.2
PACSIN3-207ENST00000530513 LMTK2Q8IWU2 1503 aa35.01■■■■□ 3.19
PACSIN3-207ENST00000530513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35■■■■□ 3.192e-6■□□□□ 10.8
PACSIN3-207ENST00000530513 HSPA1LP34931 641 aa34.99■■■■□ 3.19
PACSIN3-207ENST00000530513 ANKRD30AQ9BXX3 1397 aa34.99■■■■□ 3.19
PACSIN3-207ENST00000530513 KDM5AP29375 1690 aaKnown RBP34.98■■■■□ 3.19
PACSIN3-207ENST00000530513 CHIC2Q9UKJ5 165 aa34.97■■■■□ 3.19
PACSIN3-207ENST00000530513 MED1Q15648 1581 aaPredicted RBP34.96■■■■□ 3.19
PACSIN3-207ENST00000530513 KANK1Q14678 1352 aa34.96■■■■□ 3.19
PACSIN3-207ENST00000530513 EFCAB6Q5THR3 1501 aa34.96■■■■□ 3.19
PACSIN3-207ENST00000530513 ADGRL2O95490 1459 aa34.95■■■■□ 3.19
PACSIN3-207ENST00000530513 XIRP1Q702N8 1843 aaKnown RBP34.94■■■■□ 3.18
PACSIN3-207ENST00000530513 LTKP29376 864 aa34.93■■■■□ 3.18
PACSIN3-207ENST00000530513 TXNDC2Q86VQ3 553 aa34.87■■■■□ 3.17
PACSIN3-207ENST00000530513 TMEM2Q9UHN6 1383 aa34.86■■■■□ 3.17
PACSIN3-207ENST00000530513 ADGRB3O60242 1522 aa34.84■■■■□ 3.17
PACSIN3-207ENST00000530513 NOS1P29475 1434 aa34.82■■■■□ 3.17
PACSIN3-207ENST00000530513 EID1Q9Y6B2 187 aa34.8■■■■□ 3.16
PACSIN3-207ENST00000530513 FAM50AQ14320 339 aaKnown RBP34.79■■■■□ 3.16
PACSIN3-207ENST00000530513 TET3O43151 1660 aa34.78■■■■□ 3.16
PACSIN3-207ENST00000530513 MYO5BQ9ULV0 1848 aa34.78■■■■□ 3.16
PACSIN3-207ENST00000530513 IDI1Q13907 227 aa34.77■■■■□ 3.16
PACSIN3-207ENST00000530513 STAG3Q9UJ98 1225 aa34.77■■■■□ 3.16
PACSIN3-207ENST00000530513 ANKRD50Q9ULJ7 1429 aa34.76■■■■□ 3.16
PACSIN3-207ENST00000530513 GCC2Q8IWJ2 1684 aa34.74■■■■□ 3.15
PACSIN3-207ENST00000530513 UNC13BO14795 1591 aa34.74■■■■□ 3.15
PACSIN3-207ENST00000530513 RPRD2Q5VT52 1461 aaKnown RBP34.72■■■■□ 3.15
PACSIN3-207ENST00000530513 SENP3Q9H4L4 574 aaPredicted RBP34.71■■■■□ 3.15
PACSIN3-207ENST00000530513 NWD1Q149M9 1564 aa34.67■■■■□ 3.14
PACSIN3-207ENST00000530513 E9PCH4 1651 aa34.63■■■■□ 3.13
PACSIN3-207ENST00000530513 TMEM131LA2VDJ0 1609 aa34.63■■■■□ 3.13
PACSIN3-207ENST00000530513 SLC26A8Q96RN1 970 aa34.61■■■■□ 3.13
PACSIN3-207ENST00000530513 SLC52A1Q9NWF4 448 aa34.61■■■■□ 3.13
PACSIN3-207ENST00000530513 TMEM94Q12767 1356 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms