RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
VPS26B-205ENST00000530402 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
VPS26B-205ENST00000530402 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
VPS26B-205ENST00000530402 FECHP22830 423 aa12.79□□□□□ -0.36
VPS26B-205ENST00000530402 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
VPS26B-205ENST00000530402 C6orf132Q5T0Z8 1188 aa12.79□□□□□ -0.36
VPS26B-205ENST00000530402 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
VPS26B-205ENST00000530402 IRF6O14896 467 aa12.77□□□□□ -0.37
VPS26B-205ENST00000530402 NPDC1Q9NQX5 325 aaPredicted RBP12.77□□□□□ -0.37
VPS26B-205ENST00000530402 TRIM66O15016 1216 aa12.75□□□□□ -0.37
VPS26B-205ENST00000530402 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
VPS26B-205ENST00000530402 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
VPS26B-205ENST00000530402 PDE4DQ08499 809 aa12.71□□□□□ -0.37
VPS26B-205ENST00000530402 PTPREP23469 700 aa12.69□□□□□ -0.38
VPS26B-205ENST00000530402 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
VPS26B-205ENST00000530402 ERBB3P21860 1342 aa12.68□□□□□ -0.38
VPS26B-205ENST00000530402 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
VPS26B-205ENST00000530402 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
VPS26B-205ENST00000530402 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-205ENST00000530402 ST18O60284 1047 aa12.66□□□□□ -0.38
VPS26B-205ENST00000530402 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
VPS26B-205ENST00000530402 EMP3P54852 163 aa12.64□□□□□ -0.39
VPS26B-205ENST00000530402 PRSS12P56730 875 aa12.64□□□□□ -0.39
VPS26B-205ENST00000530402 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
VPS26B-205ENST00000530402 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
VPS26B-205ENST00000530402 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
VPS26B-205ENST00000530402 COL9A1P20849 921 aa12.63□□□□□ -0.39
VPS26B-205ENST00000530402 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
VPS26B-205ENST00000530402 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
VPS26B-205ENST00000530402 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
VPS26B-205ENST00000530402 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
VPS26B-205ENST00000530402 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
VPS26B-205ENST00000530402 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
VPS26B-205ENST00000530402 AMHR2Q16671 573 aa12.62□□□□□ -0.39
VPS26B-205ENST00000530402 OATP04181 439 aa12.61□□□□□ -0.39
VPS26B-205ENST00000530402 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
VPS26B-205ENST00000530402 PARP9Q8IXQ6 854 aa12.57□□□□□ -0.4
VPS26B-205ENST00000530402 ADGRG1Q9Y653 693 aa12.57□□□□□ -0.4
VPS26B-205ENST00000530402 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
VPS26B-205ENST00000530402 METTL3Q86U44 580 aaKnown RBP12.56□□□□□ -0.4
VPS26B-205ENST00000530402 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
VPS26B-205ENST00000530402 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
VPS26B-205ENST00000530402 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
VPS26B-205ENST00000530402 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
VPS26B-205ENST00000530402 CLCN1P35523 988 aa12.54□□□□□ -0.4
VPS26B-205ENST00000530402 PSEN2P49810 448 aa12.54□□□□□ -0.4
VPS26B-205ENST00000530402 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-205ENST00000530402 PACS2Q86VP3 889 aa12.54□□□□□ -0.4
VPS26B-205ENST00000530402 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
VPS26B-205ENST00000530402 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
VPS26B-205ENST00000530402 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
VPS26B-205ENST00000530402 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
VPS26B-205ENST00000530402 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
VPS26B-205ENST00000530402 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
VPS26B-205ENST00000530402 PROX2Q3B8N5 592 aa12.52□□□□□ -0.41
VPS26B-205ENST00000530402 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
VPS26B-205ENST00000530402 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
VPS26B-205ENST00000530402 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
VPS26B-205ENST00000530402 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
VPS26B-205ENST00000530402 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
VPS26B-205ENST00000530402 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
VPS26B-205ENST00000530402 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
VPS26B-205ENST00000530402 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
VPS26B-205ENST00000530402 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
VPS26B-205ENST00000530402 TATDN2Q93075 761 aa12.48□□□□□ -0.41
VPS26B-205ENST00000530402 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
VPS26B-205ENST00000530402 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
VPS26B-205ENST00000530402 PBX2P40425 430 aa12.47□□□□□ -0.41
VPS26B-205ENST00000530402 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
VPS26B-205ENST00000530402 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
VPS26B-205ENST00000530402 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.41
VPS26B-205ENST00000530402 KIAA1468Q9P260 1216 aa12.46□□□□□ -0.41
VPS26B-205ENST00000530402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
VPS26B-205ENST00000530402 RCCD1A6NED2 376 aa12.45□□□□□ -0.42
VPS26B-205ENST00000530402 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
VPS26B-205ENST00000530402 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
VPS26B-205ENST00000530402 EYA1Q99502 592 aa12.45□□□□□ -0.42
VPS26B-205ENST00000530402 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
VPS26B-205ENST00000530402 SMAPO00193 183 aa12.44□□□□□ -0.42
VPS26B-205ENST00000530402 SSTR3P32745 418 aaPredicted RBP12.44□□□□□ -0.42
VPS26B-205ENST00000530402 MS4A1P11836 297 aa12.43□□□□□ -0.42
VPS26B-205ENST00000530402 TMUB1Q9BVT8 246 aa12.43□□□□□ -0.42
VPS26B-205ENST00000530402 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
VPS26B-205ENST00000530402 DNAJB2P25686 324 aa12.42□□□□□ -0.42
VPS26B-205ENST00000530402 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
VPS26B-205ENST00000530402 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
VPS26B-205ENST00000530402 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
VPS26B-205ENST00000530402 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
VPS26B-205ENST00000530402 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
VPS26B-205ENST00000530402 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
VPS26B-205ENST00000530402 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
VPS26B-205ENST00000530402 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
VPS26B-205ENST00000530402 BEGAINQ9BUH8 593 aa12.37□□□□□ -0.43
VPS26B-205ENST00000530402 SEPT9Q9UHD8 586 aaPredicted RBP12.37□□□□□ -0.43
VPS26B-205ENST00000530402 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
VPS26B-205ENST00000530402 SULF1Q8IWU6 871 aa12.35□□□□□ -0.43
VPS26B-205ENST00000530402 TMEM134Q9H6X4 195 aa12.35□□□□□ -0.43
VPS26B-205ENST00000530402 DDX11L8A8MPP1 907 aa12.34□□□□□ -0.43
VPS26B-205ENST00000530402 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
VPS26B-205ENST00000530402 ATP1B4Q9UN42 357 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms