RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 ILDR2Q71H61 639 aa12.07□□□□□ -0.48
NUP98-217ENST00000530345 CCDC141Q6ZP82 1450 aa12.07□□□□□ -0.48
NUP98-217ENST00000530345 NEURL4Q96JN8 1562 aa12.06□□□□□ -0.48
NUP98-217ENST00000530345 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
NUP98-217ENST00000530345 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
NUP98-217ENST00000530345 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
NUP98-217ENST00000530345 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
NUP98-217ENST00000530345 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
NUP98-217ENST00000530345 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
NUP98-217ENST00000530345 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
NUP98-217ENST00000530345 GGT6Q6P531 493 aa12.04□□□□□ -0.48
NUP98-217ENST00000530345 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
NUP98-217ENST00000530345 SYNMO15061 1565 aa12.04□□□□□ -0.48
NUP98-217ENST00000530345 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
NUP98-217ENST00000530345 UBAP1LF5GYI3 381 aa12.03□□□□□ -0.48
NUP98-217ENST00000530345 TNRQ92752 1358 aa12.03□□□□□ -0.48
NUP98-217ENST00000530345 MAST1Q9Y2H9 1570 aa12.02□□□□□ -0.49
NUP98-217ENST00000530345 MED14O60244 1454 aa12.02□□□□□ -0.49
NUP98-217ENST00000530345 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.49
NUP98-217ENST00000530345 UGGT1Q9NYU2 1555 aa12.01□□□□□ -0.49
NUP98-217ENST00000530345 MED1Q15648 1581 aaPredicted RBP12.01□□□□□ -0.49
NUP98-217ENST00000530345 CFAP65Q6ZU64 1925 aaKnown RBP12□□□□□ -0.49
NUP98-217ENST00000530345 NCOA2Q15596 1464 aa12□□□□□ -0.49
NUP98-217ENST00000530345 VWDEQ8N2E2 1590 aa12□□□□□ -0.49
NUP98-217ENST00000530345 TOM1O60784 492 aa11.99□□□□□ -0.49
NUP98-217ENST00000530345 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
NUP98-217ENST00000530345 THEMISQ8N1K5 641 aaPredicted RBP11.97□□□□□ -0.49
NUP98-217ENST00000530345 CEP152O94986 1710 aa11.97□□□□□ -0.49
NUP98-217ENST00000530345 UBR1Q8IWV7 1749 aa11.97□□□□□ -0.49
NUP98-217ENST00000530345 KDM5AP29375 1690 aaKnown RBP11.97□□□□□ -0.49
NUP98-217ENST00000530345 WASHC2CQ9Y4E1 1318 aa11.96□□□□□ -0.49
NUP98-217ENST00000530345 KIF3BO15066 747 aa11.96□□□□□ -0.49
NUP98-217ENST00000530345 ANKLE2Q86XL3 938 aa11.96□□□□□ -0.49
NUP98-217ENST00000530345 ABCC3O15438 1527 aa11.96□□□□□ -0.5
NUP98-217ENST00000530345 NPHP4O75161 1426 aaPredicted RBP11.95□□□□□ -0.5
NUP98-217ENST00000530345 STRCP1A6NGW2 1772 aa11.95□□□□□ -0.5
NUP98-217ENST00000530345 ZNF644Q9H582 1327 aaPredicted RBP11.95□□□□□ -0.5
NUP98-217ENST00000530345 CROCC2H7BZ55 1655 aa11.95□□□□□ -0.5
NUP98-217ENST00000530345 MAP3K1Q13233 1512 aa11.94□□□□□ -0.5
NUP98-217ENST00000530345 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
NUP98-217ENST00000530345 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
NUP98-217ENST00000530345 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
NUP98-217ENST00000530345 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
NUP98-217ENST00000530345 ALKQ9UM73 1620 aa11.92□□□□□ -0.5
NUP98-217ENST00000530345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
NUP98-217ENST00000530345 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
NUP98-217ENST00000530345 DUOX2Q9NRD8 1548 aa11.91□□□□□ -0.5
NUP98-217ENST00000530345 XIRP1Q702N8 1843 aaKnown RBP11.9□□□□□ -0.5
NUP98-217ENST00000530345 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
NUP98-217ENST00000530345 FBXO31Q5XUX0 539 aaPredicted RBP11.9□□□□□ -0.5
NUP98-217ENST00000530345 SLIT1O75093 1534 aa11.9□□□□□ -0.5
NUP98-217ENST00000530345 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
NUP98-217ENST00000530345 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
NUP98-217ENST00000530345 HSPA1LP34931 641 aa11.89□□□□□ -0.51
NUP98-217ENST00000530345 LRRC7Q96NW7 1537 aa11.89□□□□□ -0.51
NUP98-217ENST00000530345 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
NUP98-217ENST00000530345 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
NUP98-217ENST00000530345 MYOM3Q5VTT5 1437 aa11.87□□□□□ -0.51
NUP98-217ENST00000530345 ERBINQ96RT1 1412 aa11.87□□□□□ -0.51
NUP98-217ENST00000530345 PIP4K2BP78356 416 aa11.87□□□□□ -0.51
NUP98-217ENST00000530345 ARHGAP23Q9P227 1491 aa11.87□□□□□ -0.51
NUP98-217ENST00000530345 PHF23Q9BUL5 403 aaPredicted RBP11.86□□□□□ -0.51
NUP98-217ENST00000530345 PIK3C2BO00750 1634 aa11.84□□□□□ -0.51
NUP98-217ENST00000530345 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
NUP98-217ENST00000530345 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
NUP98-217ENST00000530345 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
NUP98-217ENST00000530345 KANK1Q14678 1352 aa11.8□□□□□ -0.52
NUP98-217ENST00000530345 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
NUP98-217ENST00000530345 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
NUP98-217ENST00000530345 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
NUP98-217ENST00000530345 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
NUP98-217ENST00000530345 ADGRB3O60242 1522 aa11.78□□□□□ -0.52
NUP98-217ENST00000530345 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
NUP98-217ENST00000530345 ROBO1Q9Y6N7 1651 aa11.78□□□□□ -0.52
NUP98-217ENST00000530345 FAM135BQ49AJ0 1406 aa11.77□□□□□ -0.52
NUP98-217ENST00000530345 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
NUP98-217ENST00000530345 MYO5BQ9ULV0 1848 aa11.77□□□□□ -0.52
NUP98-217ENST00000530345 RPRD2Q5VT52 1461 aaKnown RBP11.76□□□□□ -0.53
NUP98-217ENST00000530345 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
NUP98-217ENST00000530345 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
NUP98-217ENST00000530345 TET3O43151 1660 aa11.75□□□□□ -0.53
NUP98-217ENST00000530345 ABCC5O15440 1437 aa11.75□□□□□ -0.53
NUP98-217ENST00000530345 DAPK1P53355 1430 aa11.75□□□□□ -0.53
NUP98-217ENST00000530345 ANKRD30AQ9BXX3 1397 aa11.74□□□□□ -0.53
NUP98-217ENST00000530345 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
NUP98-217ENST00000530345 LTKP29376 864 aa11.73□□□□□ -0.53
NUP98-217ENST00000530345 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
NUP98-217ENST00000530345 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
NUP98-217ENST00000530345 NOS1P29475 1434 aa11.72□□□□□ -0.53
NUP98-217ENST00000530345 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
NUP98-217ENST00000530345 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
NUP98-217ENST00000530345 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
NUP98-217ENST00000530345 SETD1AO15047 1707 aaKnown RBP11.71□□□□□ -0.54
NUP98-217ENST00000530345 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
NUP98-217ENST00000530345 KCNA6P17658 529 aa11.7□□□□□ -0.54
NUP98-217ENST00000530345 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
NUP98-217ENST00000530345 APLP2Q06481 763 aa11.69□□□□□ -0.54
NUP98-217ENST00000530345 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
NUP98-217ENST00000530345 UNC13BO14795 1591 aa11.69□□□□□ -0.54
NUP98-217ENST00000530345 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms