RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-208ENST00000529970 CFDP1Q9UEE9 299 aaPredicted RBP6.54□□□□□ -1.36
ARHGEF12-208ENST00000529970 EID1Q9Y6B2 187 aa6.54□□□□□ -1.36
ARHGEF12-208ENST00000529970 ZNF772Q68DY9 489 aaPredicted RBP6.54□□□□□ -1.36
ARHGEF12-208ENST00000529970 KIAA1107Q9UPP5 1409 aa6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 WASHC2CQ9Y4E1 1318 aa6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 RNF17Q9BXT8 1623 aaKnown RBP6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 APLP2Q06481 763 aa6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 SYNMO15061 1565 aa6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 ATP7AQ04656 1500 aa6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 ITSN2Q9NZM3 1697 aa6.53□□□□□ -1.36
ARHGEF12-208ENST00000529970 CCNB3Q8WWL7 1395 aa6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 LRRC9Q6ZRR7 1453 aa6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 ZBTB22O15209 634 aa6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 PREX2Q70Z35 1606 aa6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 CLTCQ00610 1675 aaKnown RBP6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 SAMD9LQ8IVG5 1584 aa6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 FAM135BQ49AJ0 1406 aa6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 HNRNPMP52272 730 aaKnown RBP eCLIP6.52□□□□□ -1.37
ARHGEF12-208ENST00000529970 BCANQ96GW7 911 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 DNMT1P26358 1616 aaKnown RBP6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 MED14O60244 1454 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 MIA2Q96PC5 1412 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 KIF3BO15066 747 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 RSPH4AQ5TD94 716 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 POTEAQ6S8J7 498 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 POLR1AO95602 1720 aaPredicted RBP6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 PZPP20742 1482 aa6.51□□□□□ -1.37
ARHGEF12-208ENST00000529970 KDM5DQ9BY66 1539 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 KIDINS220Q9ULH0 1771 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 UGGT1Q9NYU2 1555 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 JCADQ9P266 1359 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 STAG3Q9UJ98 1225 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 KLHL34Q8N239 644 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 DHX29Q7Z478 1369 aaKnown RBP6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 DEPDC5O75140 1603 aa6.5□□□□□ -1.37
ARHGEF12-208ENST00000529970 RGS17Q9UGC6 210 aaPredicted RBP6.49□□□□□ -1.37
ARHGEF12-208ENST00000529970 VWDEQ8N2E2 1590 aa6.49□□□□□ -1.37
ARHGEF12-208ENST00000529970 SYCP2Q9BX26 1530 aa6.49□□□□□ -1.37
ARHGEF12-208ENST00000529970 RTEL1-TNFRSF6BF6WH68 1400 aa6.49□□□□□ -1.37
ARHGEF12-208ENST00000529970 HAP1P54257 671 aaPredicted RBP6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 PCGF6Q9BYE7 350 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 PROSER2Q86WR7 435 aaPredicted RBP6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 UPF1Q92900 1129 aaKnown RBP eCLIP6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 SPATA31A6Q5VVP1 1343 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 CASKIN1Q8WXD9 1431 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 TSPY4P0CV99 314 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 TSPY10P0CW01 314 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 RXRBP28702 533 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 TXNDC2Q86VQ3 553 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 MSH6P52701 1360 aa6.48□□□□□ -1.37
ARHGEF12-208ENST00000529970 TRIM52Q96A61 297 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 NEURL4Q96JN8 1562 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 ADGBQ8N7X0 1667 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 PLXNC1O60486 1568 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 FBXO31Q5XUX0 539 aaPredicted RBP6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 MTUS2Q5JR59 1369 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 PLCB2Q00722 1185 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 ZRANB1Q9UGI0 708 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 IQGAP1P46940 1657 aa6.47□□□□□ -1.37
ARHGEF12-208ENST00000529970 PODXL2Q9NZ53 605 aa6.46□□□□□ -1.37
ARHGEF12-208ENST00000529970 CDC42BPBQ9Y5S2 1711 aa6.46□□□□□ -1.37
ARHGEF12-208ENST00000529970 HOMEZQ8IX15 550 aa6.46□□□□□ -1.38
ARHGEF12-208ENST00000529970 INO80Q9ULG1 1556 aaPredicted RBP6.46□□□□□ -1.38
ARHGEF12-208ENST00000529970 HDGFP51858 240 aaKnown RBP6.46□□□□□ -1.38
ARHGEF12-208ENST00000529970 C14orf37Q86TY3 774 aa6.45□□□□□ -1.38
ARHGEF12-208ENST00000529970 ARHGAP35Q9NRY4 1499 aa6.45□□□□□ -1.38
ARHGEF12-208ENST00000529970 GPATCH8Q9UKJ3 1502 aaKnown RBP6.45□□□□□ -1.38
ARHGEF12-208ENST00000529970 KCNA6P17658 529 aa6.45□□□□□ -1.38
ARHGEF12-208ENST00000529970 FYCO1Q9BQS8 1478 aa6.44□□□□□ -1.38
ARHGEF12-208ENST00000529970 FGD6Q6ZV73 1430 aa6.44□□□□□ -1.38
ARHGEF12-208ENST00000529970 TMEM94Q12767 1356 aa6.44□□□□□ -1.38
ARHGEF12-208ENST00000529970 NGLY1Q96IV0 654 aa6.44□□□□□ -1.38
ARHGEF12-208ENST00000529970 CDK12Q9NYV4 1490 aaPredicted RBP6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 NUTM2BA6NNL0 878 aaPredicted RBP6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 NUTM2EB1AL46 878 aaPredicted RBP6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 NUTM2DQ5VT03 806 aaPredicted RBP6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 NUTM2AQ8IVF1 878 aaPredicted RBP6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 ERICH6Q7L0X2 663 aa6.43□□□□□ -1.38
ARHGEF12-208ENST00000529970 SLAIN2Q9P270 581 aa6.42□□□□□ -1.38
ARHGEF12-208ENST00000529970 CCDC141Q6ZP82 1450 aa6.42□□□□□ -1.38
ARHGEF12-208ENST00000529970 KANK1Q14678 1352 aa6.42□□□□□ -1.38
ARHGEF12-208ENST00000529970 ATF3P18847 181 aa6.42□□□□□ -1.38
ARHGEF12-208ENST00000529970 PELP1Q8IZL8 1130 aaKnown RBP6.42□□□□□ -1.38
ARHGEF12-208ENST00000529970 ATAD2Q6PL18 1390 aa6.42□□□□□ -1.38
ARHGEF12-208ENST00000529970 HRCP23327 699 aa6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 CDC42BPAQ5VT25 1732 aa6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 ABCC3O15438 1527 aa6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 NKTRP30414 1462 aaKnown RBP6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 CADPS2Q86UW7 1296 aa6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 ALKQ9UM73 1620 aa6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 PPP1R15AO75807 674 aaPredicted RBP6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 ERVK-7P63135 1459 aa6.41□□□□□ -1.38
ARHGEF12-208ENST00000529970 RBM6P78332 1123 aaKnown RBP6.4□□□□□ -1.38
ARHGEF12-208ENST00000529970 CCDC125Q86Z20 511 aa6.4□□□□□ -1.38
ARHGEF12-208ENST00000529970 GTF3C3Q9Y5Q9 886 aa6.4□□□□□ -1.39
ARHGEF12-208ENST00000529970 NCOA3Q9Y6Q9 1424 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms