RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 ABCA6Q8N139 1617 aa24.18■■□□□ 1.46
PACS1-209ENST00000529757 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
PACS1-209ENST00000529757 IQGAP3Q86VI3 1631 aa24.16■■□□□ 1.46
PACS1-209ENST00000529757 FOXD1Q16676 465 aa24.16■■□□□ 1.46
PACS1-209ENST00000529757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.16■■□□□ 1.46
PACS1-209ENST00000529757 PKD2Q13563 968 aa24.15■■□□□ 1.46
PACS1-209ENST00000529757 DEPDC5O75140 1603 aa24.15■■□□□ 1.46
PACS1-209ENST00000529757 ANKRD30BQ9BXX2 1392 aa24.15■■□□□ 1.46
PACS1-209ENST00000529757 DIP2CQ9Y2E4 1556 aa24.14■■□□□ 1.46
PACS1-209ENST00000529757 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
PACS1-209ENST00000529757 KIF3BO15066 747 aa24.11■■□□□ 1.45
PACS1-209ENST00000529757 YEATS2Q9ULM3 1422 aa24.1■■□□□ 1.45
PACS1-209ENST00000529757 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
PACS1-209ENST00000529757 COL17A1Q9UMD9 1497 aaPredicted RBP24.08■■□□□ 1.45
PACS1-209ENST00000529757 KANK1Q14678 1352 aa24.08■■□□□ 1.44
PACS1-209ENST00000529757 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.44
PACS1-209ENST00000529757 BCORL1Q5H9F3 1711 aa24.07■■□□□ 1.44
PACS1-209ENST00000529757 RNF17Q9BXT8 1623 aaKnown RBP24.07■■□□□ 1.44
PACS1-209ENST00000529757 MROH1Q8NDA8 1641 aa24.06■■□□□ 1.44
PACS1-209ENST00000529757 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
PACS1-209ENST00000529757 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
PACS1-209ENST00000529757 RPRD2Q5VT52 1461 aaKnown RBP24.04■■□□□ 1.44
PACS1-209ENST00000529757 ATP10AO60312 1499 aa24.02■■□□□ 1.44
PACS1-209ENST00000529757 TET3O43151 1660 aa23.99■■□□□ 1.43
PACS1-209ENST00000529757 REREQ9P2R6 1566 aa23.99■■□□□ 1.43
PACS1-209ENST00000529757 ARHGEF40Q8TER5 1519 aa23.98■■□□□ 1.43
PACS1-209ENST00000529757 LMTK2Q8IWU2 1503 aa23.96■■□□□ 1.43
PACS1-209ENST00000529757 E9PCH4 1651 aa23.95■■□□□ 1.42
PACS1-209ENST00000529757 GGT6Q6P531 493 aa23.95■■□□□ 1.42
PACS1-209ENST00000529757 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
PACS1-209ENST00000529757 PLA2R1Q13018 1463 aa23.92■■□□□ 1.42
PACS1-209ENST00000529757 AGLP35573 1532 aa23.92■■□□□ 1.42
PACS1-209ENST00000529757 EFCAB6Q5THR3 1501 aa23.92■■□□□ 1.42
PACS1-209ENST00000529757 CEP152O94986 1710 aa23.91■■□□□ 1.42
PACS1-209ENST00000529757 CCDC144AA2RUR9 1427 aa23.91■■□□□ 1.42
PACS1-209ENST00000529757 ABCC3O15438 1527 aa23.89■■□□□ 1.42
PACS1-209ENST00000529757 L3MBTL2Q969R5 705 aa23.88■■□□□ 1.41
PACS1-209ENST00000529757 WASHC2CQ9Y4E1 1318 aa23.87■■□□□ 1.41
PACS1-209ENST00000529757 PTPRTO14522 1441 aa23.86■■□□□ 1.41
PACS1-209ENST00000529757 SPHKAPQ2M3C7 1700 aa23.86■■□□□ 1.41
PACS1-209ENST00000529757 ZC3H13Q5T200 1668 aaKnown RBP23.85■■□□□ 1.41
PACS1-209ENST00000529757 TRPM2O94759 1503 aa23.85■■□□□ 1.41
PACS1-209ENST00000529757 SIGLEC1Q9BZZ2 1709 aa23.82■■□□□ 1.4
PACS1-209ENST00000529757 CAMSAP1Q5T5Y3 1602 aa23.82■■□□□ 1.4
PACS1-209ENST00000529757 NPATQ14207 1427 aa23.8■■□□□ 1.4
PACS1-209ENST00000529757 PPP6R1Q9UPN7 881 aa23.79■■□□□ 1.4
PACS1-209ENST00000529757 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
PACS1-209ENST00000529757 ARHGAP31Q2M1Z3 1444 aa23.77■■□□□ 1.4
PACS1-209ENST00000529757 CLTCL1P53675 1640 aa23.75■■□□□ 1.39
PACS1-209ENST00000529757 CNTLNQ9NXG0 1405 aa23.73■■□□□ 1.39
PACS1-209ENST00000529757 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
PACS1-209ENST00000529757 MLECQ14165 292 aa23.7■■□□□ 1.39
PACS1-209ENST00000529757 ARID4BQ4LE39 1312 aaPredicted RBP23.7■■□□□ 1.38
PACS1-209ENST00000529757 NOS1P29475 1434 aa23.69■■□□□ 1.38
PACS1-209ENST00000529757 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
PACS1-209ENST00000529757 RGL3Q3MIN7 710 aa23.69■■□□□ 1.38
PACS1-209ENST00000529757 UHRF1BP1Q6BDS2 1440 aa23.68■■□□□ 1.38
PACS1-209ENST00000529757 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
PACS1-209ENST00000529757 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
PACS1-209ENST00000529757 CLTCQ00610 1675 aaKnown RBP23.68■■□□□ 1.38
PACS1-209ENST00000529757 NEURL4Q96JN8 1562 aa23.67■■□□□ 1.38
PACS1-209ENST00000529757 CFAP65Q6ZU64 1925 aaKnown RBP23.64■■□□□ 1.37
PACS1-209ENST00000529757 ESF1Q9H501 851 aaKnown RBP23.64■■□□□ 1.37
PACS1-209ENST00000529757 KDM2AQ9Y2K7 1162 aa23.64■■□□□ 1.37
PACS1-209ENST00000529757 SYNMO15061 1565 aa23.63■■□□□ 1.37
PACS1-209ENST00000529757 PREX1Q8TCU6 1659 aa23.63■■□□□ 1.37
PACS1-209ENST00000529757 KIF1BO60333 1816 aa23.63■■□□□ 1.37
PACS1-209ENST00000529757 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
PACS1-209ENST00000529757 PIK3C2BO00750 1634 aa23.6■■□□□ 1.37
PACS1-209ENST00000529757 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
PACS1-209ENST00000529757 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
PACS1-209ENST00000529757 ADGRB3O60242 1522 aa23.59■■□□□ 1.37
PACS1-209ENST00000529757 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.36
PACS1-209ENST00000529757 STAC3Q96MF2 364 aa23.57■■□□□ 1.36
PACS1-209ENST00000529757 SLC52A1Q9NWF4 448 aa23.57■■□□□ 1.36
PACS1-209ENST00000529757 MROH2AA6NES4 1674 aa23.56■■□□□ 1.36
PACS1-209ENST00000529757 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
PACS1-209ENST00000529757 SPATA31D1Q6ZQQ2 1576 aa23.55■■□□□ 1.36
PACS1-209ENST00000529757 FBXO31Q5XUX0 539 aaPredicted RBP23.54■■□□□ 1.36
PACS1-209ENST00000529757 CHGAP10645 457 aaKnown RBP23.53■■□□□ 1.36
PACS1-209ENST00000529757 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.36
PACS1-209ENST00000529757 TRPM1Q7Z4N2 1603 aa23.51■■□□□ 1.35
PACS1-209ENST00000529757 IDI1Q13907 227 aa23.51■■□□□ 1.35
PACS1-209ENST00000529757 MYOM2P54296 1465 aa23.5■■□□□ 1.35
PACS1-209ENST00000529757 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
PACS1-209ENST00000529757 IFT172Q9UG01 1749 aa23.49■■□□□ 1.35
PACS1-209ENST00000529757 HSPA5P11021 654 aaKnown RBP23.48■■□□□ 1.35
PACS1-209ENST00000529757 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
PACS1-209ENST00000529757 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
PACS1-209ENST00000529757 RPGRIP1LQ68CZ1 1315 aa23.47■■□□□ 1.35
PACS1-209ENST00000529757 FER1L4A9Z1Z3 1794 aa23.47■■□□□ 1.35
PACS1-209ENST00000529757 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
PACS1-209ENST00000529757 CARD11Q9BXL7 1154 aa23.44■■□□□ 1.34
PACS1-209ENST00000529757 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
PACS1-209ENST00000529757 PPLO60437 1756 aa23.43■■□□□ 1.34
PACS1-209ENST00000529757 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
PACS1-209ENST00000529757 USP47Q96K76 1375 aa23.43■■□□□ 1.34
PACS1-209ENST00000529757 TNRQ92752 1358 aa23.41■■□□□ 1.34
PACS1-209ENST00000529757 LAMC1P11047 1609 aa23.41■■□□□ 1.34
PACS1-209ENST00000529757 NRXN1Q9ULB1 1477 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms